RNA–Protein interactions for RNA: ENST00000639053.1

SPIN3-219, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,778 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-219ENST00000639053 BABAM1Q9NWV8 329 aa19.56■□□□□ 0.72
SPIN3-219ENST00000639053 RBM19Q9Y4C8 960 aaKnown RBP19.56■□□□□ 0.72
SPIN3-219ENST00000639053 PLIN1O60240 522 aa19.55■□□□□ 0.72
SPIN3-219ENST00000639053 CDCA7Q9BWT1 371 aaPredicted RBP19.55■□□□□ 0.72
SPIN3-219ENST00000639053 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.55■□□□□ 0.72
SPIN3-219ENST00000639053 VAMP4O75379 141 aa19.55■□□□□ 0.72
SPIN3-219ENST00000639053 TWISTNBQ3B726 338 aaPredicted RBP19.55■□□□□ 0.72
SPIN3-219ENST00000639053 BARGINQ6ZT62 677 aa19.55■□□□□ 0.72
SPIN3-219ENST00000639053 BCL2L13Q9BXK5 485 aa19.55■□□□□ 0.72
SPIN3-219ENST00000639053 BTBD11A6QL63 1104 aa19.54■□□□□ 0.72
SPIN3-219ENST00000639053 EXOC5O00471 708 aa19.54■□□□□ 0.72
SPIN3-219ENST00000639053 NKX1-1Q15270 411 aaPredicted RBP19.54■□□□□ 0.72
SPIN3-219ENST00000639053 SLC52A2Q9HAB3 445 aa19.54■□□□□ 0.72
SPIN3-219ENST00000639053 SIPA1L3O60292 1781 aaPredicted RBP19.53■□□□□ 0.72
SPIN3-219ENST00000639053 TNS2Q63HR2 1409 aa19.53■□□□□ 0.72
SPIN3-219ENST00000639053 KCNQ3O43525 872 aa19.52■□□□□ 0.72
SPIN3-219ENST00000639053 FAM98CQ17RN3 349 aaKnown RBP19.52■□□□□ 0.72
SPIN3-219ENST00000639053 SSH1Q8WYL5 1049 aa19.52■□□□□ 0.72
SPIN3-219ENST00000639053 MRC1P22897 1456 aa19.52■□□□□ 0.72
SPIN3-219ENST00000639053 NFATC2IPQ8NCF5 419 aa19.52■□□□□ 0.71
SPIN3-219ENST00000639053 KDM3BQ7LBC6 1761 aa19.51■□□□□ 0.71
SPIN3-219ENST00000639053 FBXO41Q8TF61 875 aa19.51■□□□□ 0.71
SPIN3-219ENST00000639053 CABP4P57796 275 aa19.5■□□□□ 0.71
SPIN3-219ENST00000639053 DDB1Q16531 1140 aa19.5■□□□□ 0.71
SPIN3-219ENST00000639053 SMC4Q9NTJ3 1288 aa19.5■□□□□ 0.71
SPIN3-219ENST00000639053 CRBNQ96SW2 442 aa19.49■□□□□ 0.71
SPIN3-219ENST00000639053 TCERG1O14776 1098 aaKnown RBP19.49■□□□□ 0.71
SPIN3-219ENST00000639053 EIF4A1P60842 406 aaKnown RBP19.49■□□□□ 0.71
SPIN3-219ENST00000639053 ZNF428Q96B54 188 aa19.49■□□□□ 0.71
SPIN3-219ENST00000639053 ATRNO75882 1429 aa19.49■□□□□ 0.71
SPIN3-219ENST00000639053 ERVV-2B6SEH9 535 aa19.48■□□□□ 0.71
SPIN3-219ENST00000639053 ALDH1L2Q3SY69 923 aa19.48■□□□□ 0.71
SPIN3-219ENST00000639053 TOGARAM1Q9Y4F4 1720 aa19.47■□□□□ 0.71
SPIN3-219ENST00000639053 GLI3P10071 1580 aa19.47■□□□□ 0.71
SPIN3-219ENST00000639053 SLC39A6Q13433 755 aa19.47■□□□□ 0.71
SPIN3-219ENST00000639053 FRAT1Q92837 279 aaPredicted RBP19.47■□□□□ 0.71
SPIN3-219ENST00000639053 C20orf194Q5TEA3 1177 aa19.47■□□□□ 0.71
SPIN3-219ENST00000639053 GJD4Q96KN9 370 aaPredicted RBP19.47■□□□□ 0.71
SPIN3-219ENST00000639053 TRPC5Q9UL62 973 aaPredicted RBP19.47■□□□□ 0.71
SPIN3-219ENST00000639053 MRPL50Q8N5N7 158 aaKnown RBP19.46■□□□□ 0.71
SPIN3-219ENST00000639053 CANXP27824 592 aaKnown RBP19.45■□□□□ 0.7
SPIN3-219ENST00000639053 ZNF790Q6PG37 636 aa19.45■□□□□ 0.7
SPIN3-219ENST00000639053 MARCH10Q8NA82 808 aaPredicted RBP19.45■□□□□ 0.7
SPIN3-219ENST00000639053 QTRT2Q9H974 415 aaKnown RBP19.44■□□□□ 0.7
SPIN3-219ENST00000639053 A0A0G2JS52 829 aa19.44■□□□□ 0.7
SPIN3-219ENST00000639053 PDE3AQ14432 1141 aa19.43■□□□□ 0.7
SPIN3-219ENST00000639053 NOB1Q9ULX3 412 aaKnown RBP19.43■□□□□ 0.7
SPIN3-219ENST00000639053 TNNQ9UQP3 1299 aa19.43■□□□□ 0.7
SPIN3-219ENST00000639053 THSD7AQ9UPZ6 1657 aa19.43■□□□□ 0.7
SPIN3-219ENST00000639053 BRPF1P55201 1214 aaPredicted RBP19.42■□□□□ 0.7
SPIN3-219ENST00000639053 SOS1Q07889 1333 aaPredicted RBP19.42■□□□□ 0.7
SPIN3-219ENST00000639053 NECTIN2Q92692 538 aa19.42■□□□□ 0.7
SPIN3-219ENST00000639053 TMOD3Q9NYL9 352 aa19.42■□□□□ 0.7
SPIN3-219ENST00000639053 HEG1Q9ULI3 1381 aa19.42■□□□□ 0.7
SPIN3-219ENST00000639053 ZKSCAN2Q63HK3 967 aa19.41■□□□□ 0.7
SPIN3-219ENST00000639053 KIF16BQ96L93 1317 aa19.4■□□□□ 0.7
SPIN3-219ENST00000639053 TTC5Q8N0Z6 440 aa19.4■□□□□ 0.7
SPIN3-219ENST00000639053 PIGBQ92521 554 aa19.4■□□□□ 0.7
SPIN3-219ENST00000639053 ZNF496Q96IT1 587 aaPredicted RBP19.4■□□□□ 0.7
SPIN3-219ENST00000639053 PRAMEF22A3QJZ6 481 aa19.39■□□□□ 0.7
SPIN3-219ENST00000639053 GIGYF1O75420 1035 aaPredicted RBP19.39■□□□□ 0.7
SPIN3-219ENST00000639053 HOXB7P09629 217 aa19.39■□□□□ 0.7
SPIN3-219ENST00000639053 PANK1Q8TE04 598 aa19.39■□□□□ 0.7
SPIN3-219ENST00000639053 HDGFL1Q5TGJ6 251 aa19.39■□□□□ 0.69
SPIN3-219ENST00000639053 CCDC30Q5VVM6 783 aa19.39■□□□□ 0.69
SPIN3-219ENST00000639053 DOT1LQ8TEK3 1739 aa19.38■□□□□ 0.69
SPIN3-219ENST00000639053 PAPPAQ13219 1627 aa19.38■□□□□ 0.69
SPIN3-219ENST00000639053 ONECUT3O60422 494 aaPredicted RBP19.38■□□□□ 0.69
SPIN3-219ENST00000639053 EIF2S2P20042 333 aaKnown RBP19.38■□□□□ 0.69
SPIN3-219ENST00000639053 PRIM1P49642 420 aaKnown RBP19.38■□□□□ 0.69
SPIN3-219ENST00000639053 ITGB4P16144 1822 aa19.38■□□□□ 0.69
SPIN3-219ENST00000639053 SLC4A2P04920 1241 aa19.37■□□□□ 0.69
SPIN3-219ENST00000639053 TRIM27P14373 513 aa19.37■□□□□ 0.69
SPIN3-219ENST00000639053 AAMPQ13685 434 aa19.37■□□□□ 0.69
SPIN3-219ENST00000639053 CLUAP1Q96AJ1 413 aa19.37■□□□□ 0.69
SPIN3-219ENST00000639053 SYTL4Q96C24 671 aaPredicted RBP19.37■□□□□ 0.69
SPIN3-219ENST00000639053 ACSBG1Q96GR2 724 aa19.37■□□□□ 0.69
SPIN3-219ENST00000639053 FMNL2Q96PY5 1086 aa19.37■□□□□ 0.69
SPIN3-219ENST00000639053 BCL9O00512 1426 aa19.37■□□□□ 0.69
SPIN3-219ENST00000639053 IPO8O15397 1037 aaKnown RBP19.37■□□□□ 0.69
SPIN3-219ENST00000639053 RLBP1P12271 317 aa19.37■□□□□ 0.69
SPIN3-219ENST00000639053 ATF7IPQ6VMQ6 1270 aa19.37■□□□□ 0.69
SPIN3-219ENST00000639053 STK31Q9BXU1 1019 aa19.37■□□□□ 0.69
SPIN3-219ENST00000639053 KDM2BQ8NHM5 1336 aa19.36■□□□□ 0.69
SPIN3-219ENST00000639053 MS4A1P11836 297 aa19.36■□□□□ 0.69
SPIN3-219ENST00000639053 CENPQQ7L2Z9 268 aaPredicted RBP19.36■□□□□ 0.69
SPIN3-219ENST00000639053 SEPT12Q8IYM1 358 aa19.36■□□□□ 0.69
SPIN3-219ENST00000639053 ASAP1Q9ULH1 1129 aa19.36■□□□□ 0.69
SPIN3-219ENST00000639053 KCPQ6ZWJ8 1503 aa19.36■□□□□ 0.69
SPIN3-219ENST00000639053 ZNF772Q68DY9 489 aaPredicted RBP19.35■□□□□ 0.69
SPIN3-219ENST00000639053 G2E3Q7L622 706 aa19.35■□□□□ 0.69
SPIN3-219ENST00000639053 C5P01031 1676 aa19.35■□□□□ 0.69
SPIN3-219ENST00000639053 DZIP1LQ8IYY4 767 aaKnown RBP19.34■□□□□ 0.69
SPIN3-219ENST00000639053 ATG3Q9NT62 314 aa19.34■□□□□ 0.69
SPIN3-219ENST00000639053 UBR2Q8IWV8 1755 aa19.34■□□□□ 0.69
SPIN3-219ENST00000639053 PTCD1O75127 700 aaKnown RBP19.34■□□□□ 0.69
SPIN3-219ENST00000639053 SNRPA1P09661 255 aaKnown RBP19.34■□□□□ 0.69
SPIN3-219ENST00000639053 ARHGAP45Q92619 1136 aa19.34■□□□□ 0.69
SPIN3-219ENST00000639053 COG6Q9Y2V7 657 aa19.34■□□□□ 0.69
SPIN3-219ENST00000639053 CHPF2Q9P2E5 772 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms