RNA–Protein interactions for RNA: ENST00000638853.1

PAX6-241, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,248 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-241ENST00000638853 KLRG1Q96E93 195 aa16.14■□□□□ 0.17
PAX6-241ENST00000638853 EMILIN1Q9Y6C2 1016 aa16.14■□□□□ 0.17
PAX6-241ENST00000638853 TGFB2P61812 414 aa16.13■□□□□ 0.17
PAX6-241ENST00000638853 RBM46Q8TBY0 533 aaKnown RBP16.13■□□□□ 0.17
PAX6-241ENST00000638853 CLSPNQ9HAW4 1339 aa16.13■□□□□ 0.17
PAX6-241ENST00000638853 INSRP06213 1382 aa16.13■□□□□ 0.17
PAX6-241ENST00000638853 ITPK1Q13572 414 aa16.12■□□□□ 0.17
PAX6-241ENST00000638853 JMYQ8N9B5 988 aa16.12■□□□□ 0.17
PAX6-241ENST00000638853 C16orf71Q8IYS4 520 aaPredicted RBP16.11■□□□□ 0.17
PAX6-241ENST00000638853 BRCA1P38398 1863 aaKnown RBP16.11■□□□□ 0.17
PAX6-241ENST00000638853 FLT4P35916 1363 aa16.11■□□□□ 0.17
PAX6-241ENST00000638853 C10orf71Q711Q0 1435 aa16.11■□□□□ 0.17
PAX6-241ENST00000638853 ATP6V1AP38606 617 aa16.1■□□□□ 0.17
PAX6-241ENST00000638853 NKX1-1Q15270 411 aaPredicted RBP16.1■□□□□ 0.17
PAX6-241ENST00000638853 TNS4Q8IZW8 715 aa16.1■□□□□ 0.17
PAX6-241ENST00000638853 FCHSD2O94868 740 aa16.09■□□□□ 0.17
PAX6-241ENST00000638853 DPEP1P16444 411 aa16.09■□□□□ 0.17
PAX6-241ENST00000638853 C9orf131Q5VYM1 1079 aa16.09■□□□□ 0.17
PAX6-241ENST00000638853 TMOD3Q9NYL9 352 aa16.09■□□□□ 0.17
PAX6-241ENST00000638853 ASAP1Q9ULH1 1129 aa16.09■□□□□ 0.17
PAX6-241ENST00000638853 HSPA5P11021 654 aaKnown RBP16.08■□□□□ 0.16
PAX6-241ENST00000638853 FSTL1Q12841 308 aa16.08■□□□□ 0.16
PAX6-241ENST00000638853 PCNTO95613 3336 aa16.08■□□□□ 0.16
PAX6-241ENST00000638853 C4AP0C0L4 1744 aa16.08■□□□□ 0.16
PAX6-241ENST00000638853 KIF20BQ96Q89 1820 aa16.08■□□□□ 0.16
PAX6-241ENST00000638853 ARFGEF1Q9Y6D6 1849 aa16.08■□□□□ 0.16
PAX6-241ENST00000638853 PPM1GO15355 546 aaPredicted RBP16.07■□□□□ 0.16
PAX6-241ENST00000638853 PRELPP51888 382 aa16.07■□□□□ 0.16
PAX6-241ENST00000638853 TRAPPC3LQ5T215 181 aa16.07■□□□□ 0.16
PAX6-241ENST00000638853 NLGN1Q8N2Q7 840 aa16.07■□□□□ 0.16
PAX6-241ENST00000638853 POLR3GLQ9BT43 218 aa16.07■□□□□ 0.16
PAX6-241ENST00000638853 POLKQ9UBT6 870 aa16.07■□□□□ 0.16
PAX6-241ENST00000638853 SPG7Q9UQ90 795 aa16.07■□□□□ 0.16
PAX6-241ENST00000638853 KIF24Q5T7B8 1368 aa16.07■□□□□ 0.16
PAX6-241ENST00000638853 PLEKHG2Q9H7P9 1386 aa16.07■□□□□ 0.16
PAX6-241ENST00000638853 KCPQ6ZWJ8 1503 aa16.07■□□□□ 0.16
PAX6-241ENST00000638853 CCDC87Q9NVE4 849 aa16.06■□□□□ 0.16
PAX6-241ENST00000638853 WASHC2AQ641Q2 1341 aa16.05■□□□□ 0.16
PAX6-241ENST00000638853 KDM2BQ8NHM5 1336 aa16.05■□□□□ 0.16
PAX6-241ENST00000638853 EYA1Q99502 592 aa16.05■□□□□ 0.16
PAX6-241ENST00000638853 RTCBQ9Y3I0 505 aaKnown RBP16.05■□□□□ 0.16
PAX6-241ENST00000638853 TNRC6CQ9HCJ0 1690 aaKnown RBP16.05■□□□□ 0.16
PAX6-241ENST00000638853 NCAPD2Q15021 1401 aa16.04■□□□□ 0.16
PAX6-241ENST00000638853 KCNA3P22001 575 aa16.04■□□□□ 0.16
PAX6-241ENST00000638853 ARHGEF1Q92888 912 aaKnown RBP16.04■□□□□ 0.16
PAX6-241ENST00000638853 RRAGCQ9HB90 399 aa16.04■□□□□ 0.16
PAX6-241ENST00000638853 ATG3Q9NT62 314 aa16.04■□□□□ 0.16
PAX6-241ENST00000638853 GYS1P13807 737 aa16.03■□□□□ 0.16
PAX6-241ENST00000638853 TNNT2P45379 298 aaPredicted RBP16.03■□□□□ 0.16
PAX6-241ENST00000638853 EIF4G2P78344 907 aaKnown RBP eCLIP16.03■□□□□ 0.16
PAX6-241ENST00000638853 CCER1Q8TC90 406 aaPredicted RBP16.03■□□□□ 0.16
PAX6-241ENST00000638853 PANK3Q9H999 370 aa16.03■□□□□ 0.16
PAX6-241ENST00000638853 PARP3Q9Y6F1 533 aa16.03■□□□□ 0.16
PAX6-241ENST00000638853 COL5A3P25940 1745 aaPredicted RBP16.02■□□□□ 0.16
PAX6-241ENST00000638853 KDRP35968 1356 aa16.02■□□□□ 0.16
PAX6-241ENST00000638853 RNF181Q9P0P0 153 aa16.02■□□□□ 0.16
PAX6-241ENST00000638853 PIM2Q9P1W9 311 aa16.02■□□□□ 0.16
PAX6-241ENST00000638853 PHKG2P15735 406 aa16.01■□□□□ 0.15
PAX6-241ENST00000638853 RFC4P35249 363 aa16.01■□□□□ 0.15
PAX6-241ENST00000638853 IFNL2Q8IZJ0 200 aa16.01■□□□□ 0.15
PAX6-241ENST00000638853 DCAF5Q96JK2 942 aa16.01■□□□□ 0.15
PAX6-241ENST00000638853 SLC4A9Q96Q91 983 aa16.01■□□□□ 0.15
PAX6-241ENST00000638853 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.01■□□□□ 0.15
PAX6-241ENST00000638853 ZNF831Q5JPB2 1677 aa16.01■□□□□ 0.15
PAX6-241ENST00000638853 SBF1O95248 1867 aa16.01■□□□□ 0.15
PAX6-241ENST00000638853 ADRA2BP18089 450 aa16■□□□□ 0.15
PAX6-241ENST00000638853 EIF4A2Q14240 407 aaKnown RBP16■□□□□ 0.15
PAX6-241ENST00000638853 DALRD3Q5D0E6 543 aaKnown RBP16■□□□□ 0.15
PAX6-241ENST00000638853 SMC1BQ8NDV3 1235 aa16■□□□□ 0.15
PAX6-241ENST00000638853 RBM42Q9BTD8 480 aaKnown RBP16■□□□□ 0.15
PAX6-241ENST00000638853 ANKRD26Q9UPS8 1709 aa15.99■□□□□ 0.15
PAX6-241ENST00000638853 RC3H1Q5TC82 1133 aaKnown RBP15.99■□□□□ 0.15
PAX6-241ENST00000638853 CNTNAP4Q9C0A0 1308 aa15.97■□□□□ 0.15
PAX6-241ENST00000638853 MYH14Q7Z406 1995 aaKnown RBP15.97■□□□□ 0.15
PAX6-241ENST00000638853 RPS6KA4O75676 772 aa15.97■□□□□ 0.15
PAX6-241ENST00000638853 HSPA1AP0DMV8 641 aaKnown RBP15.97■□□□□ 0.15
PAX6-241ENST00000638853 HSPA1BP0DMV9 641 aaKnown RBP15.97■□□□□ 0.15
PAX6-241ENST00000638853 CHRNA5P30532 468 aa15.95■□□□□ 0.14
PAX6-241ENST00000638853 DDR1Q08345 913 aa15.94■□□□□ 0.14
PAX6-241ENST00000638853 SRP68Q9UHB9 627 aaKnown RBP15.94■□□□□ 0.14
PAX6-241ENST00000638853 ERVV-2B6SEH9 535 aa15.93■□□□□ 0.14
PAX6-241ENST00000638853 FKBP8Q14318 412 aa15.93■□□□□ 0.14
PAX6-241ENST00000638853 RASSF7Q02833 373 aa15.92■□□□□ 0.14
PAX6-241ENST00000638853 USP42Q9H9J4 1324 aaKnown RBP15.92■□□□□ 0.14
PAX6-241ENST00000638853 ZC3H4Q9UPT8 1303 aaKnown RBP15.92■□□□□ 0.14
PAX6-241ENST00000638853 VEGFAP15692 232 aaPredicted RBP15.91■□□□□ 0.14
PAX6-241ENST00000638853 MORC1Q86VD1 984 aa15.91■□□□□ 0.14
PAX6-241ENST00000638853 KDM6AO15550 1401 aaPredicted RBP15.91■□□□□ 0.14
PAX6-241ENST00000638853 GLTPD2A6NH11 291 aa15.9■□□□□ 0.14
PAX6-241ENST00000638853 PTCD1O75127 700 aaKnown RBP15.9■□□□□ 0.14
PAX6-241ENST00000638853 CRKLP46109 303 aaKnown RBP15.9■□□□□ 0.14
PAX6-241ENST00000638853 AEBP1Q8IUX7 1158 aa15.9■□□□□ 0.14
PAX6-241ENST00000638853 TIAM2Q8IVF5 1701 aa15.9■□□□□ 0.14
PAX6-241ENST00000638853 POLRMTO00411 1230 aaKnown RBP15.89■□□□□ 0.13
PAX6-241ENST00000638853 HSP90AB1P08238 724 aaKnown RBP15.89■□□□□ 0.13
PAX6-241ENST00000638853 LMNB1P20700 586 aa15.89■□□□□ 0.13
PAX6-241ENST00000638853 CABP4P57796 275 aa15.89■□□□□ 0.13
PAX6-241ENST00000638853 TJP1Q07157 1748 aa15.88■□□□□ 0.13
PAX6-241ENST00000638853 AMER1Q5JTC6 1135 aaPredicted RBP15.88■□□□□ 0.13
PAX6-241ENST00000638853 KNSTRNQ9Y448 316 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms