RNA–Protein interactions for RNA: ENST00000638820.1

SCN8A-215, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5 BASIC

Gene SCN8A, Length 3,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-215ENST00000638820 ZNF330Q9Y3S2 320 aaPredicted RBP16.78■□□□□ 0.28
SCN8A-215ENST00000638820 CYP27B1O15528 508 aa16.77■□□□□ 0.28
SCN8A-215ENST00000638820 AIMP1Q12904 312 aaKnown RBP16.77■□□□□ 0.28
SCN8A-215ENST00000638820 SKAP1Q86WV1 359 aa16.77■□□□□ 0.28
SCN8A-215ENST00000638820 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.77■□□□□ 0.28
SCN8A-215ENST00000638820 PTCD1O75127 700 aaKnown RBP16.77■□□□□ 0.27
SCN8A-215ENST00000638820 PCDH11XQ9BZA7 1347 aa16.77■□□□□ 0.27
SCN8A-215ENST00000638820 PCDH11YQ9BZA8 1340 aa16.77■□□□□ 0.27
SCN8A-215ENST00000638820 EXOC5O00471 708 aa16.76■□□□□ 0.27
SCN8A-215ENST00000638820 ALS2Q96Q42 1657 aa16.76■□□□□ 0.27
SCN8A-215ENST00000638820 FLIIQ13045 1269 aa16.76■□□□□ 0.27
SCN8A-215ENST00000638820 G2E3Q7L622 706 aa16.76■□□□□ 0.27
SCN8A-215ENST00000638820 ARHGAP45Q92619 1136 aa16.76■□□□□ 0.27
SCN8A-215ENST00000638820 BABAM1Q9NWV8 329 aa16.76■□□□□ 0.27
SCN8A-215ENST00000638820 EIF4A1P60842 406 aaKnown RBP16.75■□□□□ 0.27
SCN8A-215ENST00000638820 AAMPQ13685 434 aa16.75■□□□□ 0.27
SCN8A-215ENST00000638820 SLC52A2Q9HAB3 445 aa16.75■□□□□ 0.27
SCN8A-215ENST00000638820 NPM2Q86SE8 214 aaKnown RBP16.75■□□□□ 0.27
SCN8A-215ENST00000638820 MARF1Q9Y4F3 1742 aaKnown RBP16.75■□□□□ 0.27
SCN8A-215ENST00000638820 PCDHB15Q9Y5E8 787 aa16.75■□□□□ 0.27
SCN8A-215ENST00000638820 ZNF790Q6PG37 636 aa16.74■□□□□ 0.27
SCN8A-215ENST00000638820 CHPF2Q9P2E5 772 aa16.74■□□□□ 0.27
SCN8A-215ENST00000638820 MYL6BP14649 208 aa16.74■□□□□ 0.27
SCN8A-215ENST00000638820 TSHZ2Q9NRE2 1034 aa16.74■□□□□ 0.27
SCN8A-215ENST00000638820 CERKQ8TCT0 537 aa16.73■□□□□ 0.27
SCN8A-215ENST00000638820 PTPRCP08575 1304 aa16.73■□□□□ 0.27
SCN8A-215ENST00000638820 RGPD1P0DJD0 1748 aa16.73■□□□□ 0.27
SCN8A-215ENST00000638820 APBB1O00213 710 aa16.73■□□□□ 0.27
SCN8A-215ENST00000638820 TMOD3Q9NYL9 352 aa16.73■□□□□ 0.27
SCN8A-215ENST00000638820 RGPD2P0DJD1 1756 aa16.73■□□□□ 0.27
SCN8A-215ENST00000638820 IGHDP01880 384 aa16.72■□□□□ 0.27
SCN8A-215ENST00000638820 MEGF6O75095 1541 aa16.72■□□□□ 0.27
SCN8A-215ENST00000638820 RGPD5Q99666 1765 aa16.72■□□□□ 0.27
SCN8A-215ENST00000638820 CAMTA1Q9Y6Y1 1673 aa16.72■□□□□ 0.27
SCN8A-215ENST00000638820 ROBO1Q9Y6N7 1651 aa16.72■□□□□ 0.27
SCN8A-215ENST00000638820 RBM42Q9BTD8 480 aaKnown RBP16.71■□□□□ 0.27
SCN8A-215ENST00000638820 DBF4Q9UBU7 674 aaPredicted RBP16.71■□□□□ 0.27
SCN8A-215ENST00000638820 FMNL2Q96PY5 1086 aa16.71■□□□□ 0.27
SCN8A-215ENST00000638820 PHAXQ9H814 394 aaKnown RBP16.71■□□□□ 0.27
SCN8A-215ENST00000638820 CEMIPQ8WUJ3 1361 aa16.71■□□□□ 0.26
SCN8A-215ENST00000638820 COL5A2P05997 1499 aaPredicted RBP16.7■□□□□ 0.26
SCN8A-215ENST00000638820 ZNF496Q96IT1 587 aaPredicted RBP16.7■□□□□ 0.26
SCN8A-215ENST00000638820 USP54Q70EL1 1684 aa16.7■□□□□ 0.26
SCN8A-215ENST00000638820 DDB1Q16531 1140 aa16.7■□□□□ 0.26
SCN8A-215ENST00000638820 BRPF1P55201 1214 aaPredicted RBP16.69■□□□□ 0.26
SCN8A-215ENST00000638820 PRAMEF22A3QJZ6 481 aa16.69■□□□□ 0.26
SCN8A-215ENST00000638820 PIP4K2AP48426 406 aaPredicted RBP16.69■□□□□ 0.26
SCN8A-215ENST00000638820 CCT4P50991 539 aaKnown RBP16.69■□□□□ 0.26
SCN8A-215ENST00000638820 GIGYF1O75420 1035 aaPredicted RBP16.69■□□□□ 0.26
SCN8A-215ENST00000638820 DDX58O95786 925 aaKnown RBP16.69■□□□□ 0.26
SCN8A-215ENST00000638820 NCAPD2Q15021 1401 aa16.68■□□□□ 0.26
SCN8A-215ENST00000638820 RIC3Q7Z5B4 369 aa16.68■□□□□ 0.26
SCN8A-215ENST00000638820 PHRF1Q9P1Y6 1649 aaKnown RBP16.68■□□□□ 0.26
SCN8A-215ENST00000638820 PI4KAP2A4QPH2 592 aa16.68■□□□□ 0.26
SCN8A-215ENST00000638820 SNRPA1P09661 255 aaKnown RBP16.68■□□□□ 0.26
SCN8A-215ENST00000638820 PI4KAP1Q8N8J0 262 aa16.68■□□□□ 0.26
SCN8A-215ENST00000638820 LTBP4Q8N2S1 1624 aa16.68■□□□□ 0.26
SCN8A-215ENST00000638820 ZBTB40Q9NUA8 1239 aa16.68■□□□□ 0.26
SCN8A-215ENST00000638820 SOS1Q07889 1333 aaPredicted RBP16.67■□□□□ 0.26
SCN8A-215ENST00000638820 HOXB7P09629 217 aa16.66■□□□□ 0.26
SCN8A-215ENST00000638820 MEIS3Q99687 375 aa16.66■□□□□ 0.26
SCN8A-215ENST00000638820 SRCIN1Q9C0H9 1055 aa16.66■□□□□ 0.26
SCN8A-215ENST00000638820 C9orf78Q9NZ63 289 aaPredicted RBP16.66■□□□□ 0.26
SCN8A-215ENST00000638820 ZBTB7BO15156 539 aaPredicted RBP16.66■□□□□ 0.26
SCN8A-215ENST00000638820 ANKRD45Q5TZF3 282 aa16.66■□□□□ 0.26
SCN8A-215ENST00000638820 ABCC4O15439 1325 aa16.65■□□□□ 0.26
SCN8A-215ENST00000638820 FAM98CQ17RN3 349 aaKnown RBP16.65■□□□□ 0.26
SCN8A-215ENST00000638820 NEXNQ0ZGT2 675 aa16.65■□□□□ 0.26
SCN8A-215ENST00000638820 ACSBG1Q96GR2 724 aa16.65■□□□□ 0.26
SCN8A-215ENST00000638820 PDZRN3Q9UPQ7 1066 aa16.65■□□□□ 0.26
SCN8A-215ENST00000638820 UBTFL1P0CB47 393 aaPredicted RBP16.64■□□□□ 0.26
SCN8A-215ENST00000638820 HMMRO75330 724 aa16.64■□□□□ 0.25
SCN8A-215ENST00000638820 DNAAF4Q8WXU2 420 aa16.64■□□□□ 0.25
SCN8A-215ENST00000638820 LNPKQ9C0E8 428 aa16.64■□□□□ 0.25
SCN8A-215ENST00000638820 HYPKQ9NX55 129 aa16.64■□□□□ 0.25
SCN8A-215ENST00000638820 RBM19Q9Y4C8 960 aaKnown RBP16.64■□□□□ 0.25
SCN8A-215ENST00000638820 ERVV-2B6SEH9 535 aa16.64■□□□□ 0.25
SCN8A-215ENST00000638820 GNAI3P08754 354 aa16.64■□□□□ 0.25
SCN8A-215ENST00000638820 USP16Q9Y5T5 823 aa16.64■□□□□ 0.25
SCN8A-215ENST00000638820 JCADQ9P266 1359 aa16.63■□□□□ 0.25
SCN8A-215ENST00000638820 INTS3Q68E01 1043 aaKnown RBP16.63■□□□□ 0.25
SCN8A-215ENST00000638820 OVOS2A0A0G2JMS6 1433 aa16.63■□□□□ 0.25
SCN8A-215ENST00000638820 USP21Q9UK80 565 aa16.63■□□□□ 0.25
SCN8A-215ENST00000638820 GNAI2P04899 355 aa16.62■□□□□ 0.25
SCN8A-215ENST00000638820 MAP3K2Q9Y2U5 619 aa16.62■□□□□ 0.25
SCN8A-215ENST00000638820 KDM2BQ8NHM5 1336 aa16.62■□□□□ 0.25
SCN8A-215ENST00000638820 HSPA1LP34931 641 aa16.62■□□□□ 0.25
SCN8A-215ENST00000638820 PROSER3Q2NL68 480 aa16.62■□□□□ 0.25
SCN8A-215ENST00000638820 CDCA7Q9BWT1 371 aaPredicted RBP16.61■□□□□ 0.25
SCN8A-215ENST00000638820 DDX21Q9NR30 783 aaKnown RBP eCLIP16.61■□□□□ 0.25
SCN8A-215ENST00000638820 COPS6Q7L5N1 327 aa16.61■□□□□ 0.25
SCN8A-215ENST00000638820 KDM6AO15550 1401 aaPredicted RBP16.61■□□□□ 0.25
SCN8A-215ENST00000638820 NHSL1Q5SYE7 1610 aa16.61■□□□□ 0.25
SCN8A-215ENST00000638820 PRIM1P49642 420 aaKnown RBP16.61■□□□□ 0.25
SCN8A-215ENST00000638820 XAGE3Q8WTP9 111 aa16.61■□□□□ 0.25
SCN8A-215ENST00000638820 UNC5CLQ8IV45 518 aa16.6■□□□□ 0.25
SCN8A-215ENST00000638820 PHLPP1O60346 1717 aa16.6■□□□□ 0.25
SCN8A-215ENST00000638820 OS9Q13438 667 aaPredicted RBP16.6■□□□□ 0.25
SCN8A-215ENST00000638820 ASAP1Q9ULH1 1129 aa16.59■□□□□ 0.25
SCN8A-215ENST00000638820 PDE4AP27815 886 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms