RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-238ENST00000638755 CCDC87Q9NVE4 849 aa16.67■□□□□ 0.26
PAX6-238ENST00000638755 PKD1L3Q7Z443 1732 aa16.67■□□□□ 0.26
PAX6-238ENST00000638755 TMF1P82094 1093 aa16.66■□□□□ 0.26
PAX6-238ENST00000638755 ITPK1Q13572 414 aa16.66■□□□□ 0.26
PAX6-238ENST00000638755 RRS1Q15050 365 aaKnown RBP16.66■□□□□ 0.26
PAX6-238ENST00000638755 NLGN1Q8N2Q7 840 aa16.66■□□□□ 0.26
PAX6-238ENST00000638755 SMG6Q86US8 1419 aaKnown RBP16.65■□□□□ 0.26
PAX6-238ENST00000638755 KCNA3P22001 575 aa16.65■□□□□ 0.26
PAX6-238ENST00000638755 ATP6V1AP38606 617 aa16.65■□□□□ 0.26
PAX6-238ENST00000638755 TNRC6CQ9HCJ0 1690 aaKnown RBP16.65■□□□□ 0.26
PAX6-238ENST00000638755 TRAPPC3LQ5T215 181 aa16.64■□□□□ 0.25
PAX6-238ENST00000638755 PIM2Q9P1W9 311 aa16.64■□□□□ 0.25
PAX6-238ENST00000638755 MAP2P11137 1827 aaKnown RBP16.63■□□□□ 0.25
PAX6-238ENST00000638755 BRCA1P38398 1863 aaKnown RBP16.63■□□□□ 0.25
PAX6-238ENST00000638755 DALRD3Q5D0E6 543 aaKnown RBP16.63■□□□□ 0.25
PAX6-238ENST00000638755 DCAF5Q96JK2 942 aa16.63■□□□□ 0.25
PAX6-238ENST00000638755 ASAP1Q9ULH1 1129 aa16.63■□□□□ 0.25
PAX6-238ENST00000638755 PARP3Q9Y6F1 533 aa16.63■□□□□ 0.25
PAX6-238ENST00000638755 RTL1A6NKG5 1358 aa16.63■□□□□ 0.25
PAX6-238ENST00000638755 ARFGEF1Q9Y6D6 1849 aa16.62■□□□□ 0.25
PAX6-238ENST00000638755 RTCBQ9Y3I0 505 aaKnown RBP16.62■□□□□ 0.25
PAX6-238ENST00000638755 TMOD3Q9NYL9 352 aa16.61■□□□□ 0.25
PAX6-238ENST00000638755 C4AP0C0L4 1744 aa16.61■□□□□ 0.25
PAX6-238ENST00000638755 HSP90AB2PQ58FF8 381 aa16.6■□□□□ 0.25
PAX6-238ENST00000638755 ARHGEF1Q92888 912 aaKnown RBP16.6■□□□□ 0.25
PAX6-238ENST00000638755 GYS1P13807 737 aa16.59■□□□□ 0.25
PAX6-238ENST00000638755 VEGFAP15692 232 aaPredicted RBP16.59■□□□□ 0.25
PAX6-238ENST00000638755 RFC4P35249 363 aa16.58■□□□□ 0.24
PAX6-238ENST00000638755 SBF1O95248 1867 aa16.58■□□□□ 0.24
PAX6-238ENST00000638755 CHRNA5P30532 468 aa16.57■□□□□ 0.24
PAX6-238ENST00000638755 RASSF7Q02833 373 aa16.57■□□□□ 0.24
PAX6-238ENST00000638755 NKX1-1Q15270 411 aaPredicted RBP16.57■□□□□ 0.24
PAX6-238ENST00000638755 MKRN1Q9UHC7 482 aaKnown RBP16.57■□□□□ 0.24
PAX6-238ENST00000638755 FOXN1O15353 648 aa16.56■□□□□ 0.24
PAX6-238ENST00000638755 CARD11Q9BXL7 1154 aa16.56■□□□□ 0.24
PAX6-238ENST00000638755 GGNBP2Q9H3C7 697 aa16.56■□□□□ 0.24
PAX6-238ENST00000638755 ATG3Q9NT62 314 aa16.56■□□□□ 0.24
PAX6-238ENST00000638755 INSRP06213 1382 aa16.55■□□□□ 0.24
PAX6-238ENST00000638755 GLTPD2A6NH11 291 aa16.55■□□□□ 0.24
PAX6-238ENST00000638755 FAM161AQ3B820 660 aa16.55■□□□□ 0.24
PAX6-238ENST00000638755 SPG7Q9UQ90 795 aa16.55■□□□□ 0.24
PAX6-238ENST00000638755 ADRA2BP18089 450 aa16.54■□□□□ 0.24
PAX6-238ENST00000638755 NEUROD1Q13562 356 aa16.54■□□□□ 0.24
PAX6-238ENST00000638755 SIN3AQ96ST3 1273 aa16.54■□□□□ 0.24
PAX6-238ENST00000638755 RBM42Q9BTD8 480 aaKnown RBP16.54■□□□□ 0.24
PAX6-238ENST00000638755 ZC3H4Q9UPT8 1303 aaKnown RBP16.52■□□□□ 0.24
PAX6-238ENST00000638755 RPS6KA4O75676 772 aa16.52■□□□□ 0.24
PAX6-238ENST00000638755 SLC4A9Q96Q91 983 aa16.52■□□□□ 0.24
PAX6-238ENST00000638755 PRDM10Q9NQV6 1147 aa16.52■□□□□ 0.24
PAX6-238ENST00000638755 PCDH10Q9P2E7 1040 aa16.52■□□□□ 0.24
PAX6-238ENST00000638755 FLT4P35916 1363 aa16.51■□□□□ 0.23
PAX6-238ENST00000638755 FYB1O15117 783 aa16.51■□□□□ 0.23
PAX6-238ENST00000638755 LMNB1P20700 586 aa16.51■□□□□ 0.23
PAX6-238ENST00000638755 DDR1Q08345 913 aa16.51■□□□□ 0.23
PAX6-238ENST00000638755 RC3H1Q5TC82 1133 aaKnown RBP16.51■□□□□ 0.23
PAX6-238ENST00000638755 PUS7Q96PZ0 661 aaKnown RBP16.51■□□□□ 0.23
PAX6-238ENST00000638755 CREBZFQ9NS37 354 aa16.51■□□□□ 0.23
PAX6-238ENST00000638755 SRP68Q9UHB9 627 aaKnown RBP16.51■□□□□ 0.23
PAX6-238ENST00000638755 KDRP35968 1356 aa16.51■□□□□ 0.23
PAX6-238ENST00000638755 FKBP8Q14318 412 aa16.5■□□□□ 0.23
PAX6-238ENST00000638755 CNTNAP4Q9C0A0 1308 aa16.49■□□□□ 0.23
PAX6-238ENST00000638755 AIDAQ96BJ3 306 aa16.49■□□□□ 0.23
PAX6-238ENST00000638755 KDM6AO15550 1401 aaPredicted RBP16.48■□□□□ 0.23
PAX6-238ENST00000638755 POTECB2RU33 542 aa16.48■□□□□ 0.23
PAX6-238ENST00000638755 PHKG2P15735 406 aa16.48■□□□□ 0.23
PAX6-238ENST00000638755 CTCFP49711 727 aaPredicted RBP16.48■□□□□ 0.23
PAX6-238ENST00000638755 IFNL2Q8IZJ0 200 aa16.48■□□□□ 0.23
PAX6-238ENST00000638755 PPM1GO15355 546 aaPredicted RBP16.47■□□□□ 0.23
PAX6-238ENST00000638755 EMILIN1Q9Y6C2 1016 aa16.47■□□□□ 0.23
PAX6-238ENST00000638755 LBX1P52954 281 aa16.46■□□□□ 0.23
PAX6-238ENST00000638755 ABHD8Q96I13 439 aa16.46■□□□□ 0.23
PAX6-238ENST00000638755 COL5A3P25940 1745 aaPredicted RBP16.45■□□□□ 0.22
PAX6-238ENST00000638755 TIAM2Q8IVF5 1701 aa16.45■□□□□ 0.22
PAX6-238ENST00000638755 POLRMTO00411 1230 aaKnown RBP16.45■□□□□ 0.22
PAX6-238ENST00000638755 CHADLQ6NUI6 762 aa16.45■□□□□ 0.22
PAX6-238ENST00000638755 DPY19L2Q6NUT2 758 aa16.45■□□□□ 0.22
PAX6-238ENST00000638755 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.45■□□□□ 0.22
PAX6-238ENST00000638755 CNTNAP1P78357 1384 aa16.45■□□□□ 0.22
PAX6-238ENST00000638755 MYH14Q7Z406 1995 aaKnown RBP16.45■□□□□ 0.22
PAX6-238ENST00000638755 USP42Q9H9J4 1324 aaKnown RBP16.45■□□□□ 0.22
PAX6-238ENST00000638755 KIF24Q5T7B8 1368 aa16.44■□□□□ 0.22
PAX6-238ENST00000638755 CCDC88AQ3V6T2 1871 aa16.44■□□□□ 0.22
PAX6-238ENST00000638755 POTEIP0CG38 1075 aa16.43■□□□□ 0.22
PAX6-238ENST00000638755 POTEJP0CG39 1038 aa16.43■□□□□ 0.22
PAX6-238ENST00000638755 CRKLP46109 303 aaKnown RBP16.43■□□□□ 0.22
PAX6-238ENST00000638755 EYA1Q99502 592 aa16.43■□□□□ 0.22
PAX6-238ENST00000638755 NCAPD2Q15021 1401 aa16.43■□□□□ 0.22
PAX6-238ENST00000638755 PTCD1O75127 700 aaKnown RBP16.42■□□□□ 0.22
PAX6-238ENST00000638755 VEGFBP49765 207 aa16.42■□□□□ 0.22
PAX6-238ENST00000638755 MLLT1Q03111 559 aaPredicted RBP16.42■□□□□ 0.22
PAX6-238ENST00000638755 ZNF831Q5JPB2 1677 aa16.42■□□□□ 0.22
PAX6-238ENST00000638755 TONSLQ96HA7 1378 aa16.41■□□□□ 0.22
PAX6-238ENST00000638755 NFKBIEO00221 500 aa16.41■□□□□ 0.22
PAX6-238ENST00000638755 TM4SF1P30408 202 aa16.41■□□□□ 0.22
PAX6-238ENST00000638755 TTLL6Q8N841 843 aa16.41■□□□□ 0.22
PAX6-238ENST00000638755 TESK2Q96S53 571 aa16.41■□□□□ 0.22
PAX6-238ENST00000638755 CCDC85CA6NKD9 419 aa16.4■□□□□ 0.22
PAX6-238ENST00000638755 ERVV-2B6SEH9 535 aa16.4■□□□□ 0.22
PAX6-238ENST00000638755 WBP1LQ9NX94 342 aa16.4■□□□□ 0.22
PAX6-238ENST00000638755 ST20-MTHFSA0A0A6YYL1 179 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms