RNA–Protein interactions for RNA: ENST00000638531.1

KCNMA1-239, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-239ENST00000638531 KCNQ4P56696 695 aa19.46■□□□□ 0.71
KCNMA1-239ENST00000638531 MYH14Q7Z406 1995 aaKnown RBP19.46■□□□□ 0.71
KCNMA1-239ENST00000638531 MAP3K5Q99683 1374 aa19.45■□□□□ 0.7
KCNMA1-239ENST00000638531 ASAP1Q9ULH1 1129 aa19.45■□□□□ 0.7
KCNMA1-239ENST00000638531 C4AP0C0L4 1744 aa19.45■□□□□ 0.7
KCNMA1-239ENST00000638531 U2AF1L5P0DN76 240 aaPredicted RBP19.44■□□□□ 0.7
KCNMA1-239ENST00000638531 PRKAR2BP31323 418 aa19.44■□□□□ 0.7
KCNMA1-239ENST00000638531 CABP4P57796 275 aa19.44■□□□□ 0.7
KCNMA1-239ENST00000638531 U2AF1Q01081 240 aaKnown RBP eCLIP19.44■□□□□ 0.7
KCNMA1-239ENST00000638531 GAS2L2Q8NHY3 880 aa19.44■□□□□ 0.7
KCNMA1-239ENST00000638531 PDGFDQ9GZP0 370 aaPredicted RBP19.44■□□□□ 0.7
KCNMA1-239ENST00000638531 ATG3Q9NT62 314 aa19.44■□□□□ 0.7
KCNMA1-239ENST00000638531 MYBBP1AQ9BQG0 1328 aaKnown RBP19.44■□□□□ 0.7
KCNMA1-239ENST00000638531 LOC102724428A0A0B4J2F2 783 aa19.43■□□□□ 0.7
KCNMA1-239ENST00000638531 SIK1P57059 783 aa19.43■□□□□ 0.7
KCNMA1-239ENST00000638531 SPON1Q9HCB6 807 aa19.43■□□□□ 0.7
KCNMA1-239ENST00000638531 KCPQ6ZWJ8 1503 aa19.42■□□□□ 0.7
KCNMA1-239ENST00000638531 PNPLA7Q6ZV29 1317 aa19.42■□□□□ 0.7
KCNMA1-239ENST00000638531 RNMTO43148 476 aaKnown RBP19.41■□□□□ 0.7
KCNMA1-239ENST00000638531 FCHSD2O94868 740 aa19.41■□□□□ 0.7
KCNMA1-239ENST00000638531 SLC52A2Q9HAB3 445 aa19.41■□□□□ 0.7
KCNMA1-239ENST00000638531 MTFR1LQ9H019 292 aa19.4■□□□□ 0.7
KCNMA1-239ENST00000638531 TFCP2L1Q9NZI6 479 aa19.4■□□□□ 0.7
KCNMA1-239ENST00000638531 PPP1R1BQ9UD71 204 aaPredicted RBP19.4■□□□□ 0.7
KCNMA1-239ENST00000638531 NFATC2IPQ8NCF5 419 aa19.39■□□□□ 0.69
KCNMA1-239ENST00000638531 LGR6Q9HBX8 967 aa19.39■□□□□ 0.69
KCNMA1-239ENST00000638531 GNAT3A8MTJ3 354 aa19.38■□□□□ 0.69
KCNMA1-239ENST00000638531 ZBTB7AO95365 584 aa19.38■□□□□ 0.69
KCNMA1-239ENST00000638531 KDM3BQ7LBC6 1761 aa19.38■□□□□ 0.69
KCNMA1-239ENST00000638531 SLC16A10Q8TF71 515 aa19.38■□□□□ 0.69
KCNMA1-239ENST00000638531 CEMIPQ8WUJ3 1361 aa19.38■□□□□ 0.69
KCNMA1-239ENST00000638531 PHACTR3Q96KR7 559 aa19.38■□□□□ 0.69
KCNMA1-239ENST00000638531 ATP6V1AP38606 617 aa19.37■□□□□ 0.69
KCNMA1-239ENST00000638531 ITPK1Q13572 414 aa19.37■□□□□ 0.69
KCNMA1-239ENST00000638531 LINC00116Q8NCU8 138 aa19.37■□□□□ 0.69
KCNMA1-239ENST00000638531 PRKRIP1Q9H875 184 aaPredicted RBP19.37■□□□□ 0.69
KCNMA1-239ENST00000638531 ZNF316A6NFI3 1004 aaPredicted RBP19.36■□□□□ 0.69
KCNMA1-239ENST00000638531 AK7Q96M32 723 aa19.36■□□□□ 0.69
KCNMA1-239ENST00000638531 SLC4A9Q96Q91 983 aa19.36■□□□□ 0.69
KCNMA1-239ENST00000638531 LAMB4A4D0S4 1761 aa19.35■□□□□ 0.69
KCNMA1-239ENST00000638531 PTGER2P43116 358 aa19.35■□□□□ 0.69
KCNMA1-239ENST00000638531 RBM42Q9BTD8 480 aaKnown RBP19.35■□□□□ 0.69
KCNMA1-239ENST00000638531 FLAD1Q8NFF5 587 aa19.34■□□□□ 0.69
KCNMA1-239ENST00000638531 SGIP1Q9BQI5 828 aa19.34■□□□□ 0.69
KCNMA1-239ENST00000638531 CNTNAP4Q9C0A0 1308 aa19.33■□□□□ 0.69
KCNMA1-239ENST00000638531 IL17REQ8NFR9 667 aa19.33■□□□□ 0.68
KCNMA1-239ENST00000638531 ATF5Q9Y2D1 282 aaPredicted RBP19.33■□□□□ 0.68
KCNMA1-239ENST00000638531 NEFMP07197 916 aa19.32■□□□□ 0.68
KCNMA1-239ENST00000638531 SSFA2P28290 1259 aa19.32■□□□□ 0.68
KCNMA1-239ENST00000638531 TEFQ10587 303 aa19.32■□□□□ 0.68
KCNMA1-239ENST00000638531 COL23A1Q86Y22 540 aaPredicted RBP19.32■□□□□ 0.68
KCNMA1-239ENST00000638531 PLEKHF1Q96S99 279 aa19.32■□□□□ 0.68
KCNMA1-239ENST00000638531 PTCD1O75127 700 aaKnown RBP19.31■□□□□ 0.68
KCNMA1-239ENST00000638531 PNNQ9H307 717 aaKnown RBP19.31■□□□□ 0.68
KCNMA1-239ENST00000638531 GNPATO15228 680 aa19.3■□□□□ 0.68
KCNMA1-239ENST00000638531 HTATSF1O43719 755 aaKnown RBP19.3■□□□□ 0.68
KCNMA1-239ENST00000638531 RC3H1Q5TC82 1133 aaKnown RBP19.3■□□□□ 0.68
KCNMA1-239ENST00000638531 MAPK8IP3Q9UPT6 1336 aa19.29■□□□□ 0.68
KCNMA1-239ENST00000638531 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.29■□□□□ 0.68
KCNMA1-239ENST00000638531 AMIGO3Q86WK7 504 aa19.29■□□□□ 0.68
KCNMA1-239ENST00000638531 KIF13BQ9NQT8 1826 aa19.28■□□□□ 0.68
KCNMA1-239ENST00000638531 SLC39A6Q13433 755 aa19.28■□□□□ 0.68
KCNMA1-239ENST00000638531 RTF1Q92541 710 aaKnown RBP19.28■□□□□ 0.68
KCNMA1-239ENST00000638531 SCN7AQ01118 1682 aa19.27■□□□□ 0.68
KCNMA1-239ENST00000638531 MSH5O43196 834 aa19.27■□□□□ 0.68
KCNMA1-239ENST00000638531 PHF14O94880 888 aa19.27■□□□□ 0.68
KCNMA1-239ENST00000638531 ADRA2BP18089 450 aa19.26■□□□□ 0.67
KCNMA1-239ENST00000638531 POLD1P28340 1107 aa19.26■□□□□ 0.67
KCNMA1-239ENST00000638531 NFE2L2Q16236 605 aa19.26■□□□□ 0.67
KCNMA1-239ENST00000638531 TTC5Q8N0Z6 440 aa19.26■□□□□ 0.67
KCNMA1-239ENST00000638531 VSIG10Q8N0Z9 540 aa19.26■□□□□ 0.67
KCNMA1-239ENST00000638531 BCORQ6W2J9 1755 aa19.26■□□□□ 0.67
KCNMA1-239ENST00000638531 HEG1Q9ULI3 1381 aa19.25■□□□□ 0.67
KCNMA1-239ENST00000638531 CRKLP46109 303 aaKnown RBP19.25■□□□□ 0.67
KCNMA1-239ENST00000638531 ZNF790Q6PG37 636 aa19.25■□□□□ 0.67
KCNMA1-239ENST00000638531 MCM10Q7L590 875 aa19.25■□□□□ 0.67
KCNMA1-239ENST00000638531 ARXQ96QS3 562 aa19.25■□□□□ 0.67
KCNMA1-239ENST00000638531 RTCBQ9Y3I0 505 aaKnown RBP19.25■□□□□ 0.67
KCNMA1-239ENST00000638531 RPS6KA4O75676 772 aa19.24■□□□□ 0.67
KCNMA1-239ENST00000638531 WDR43Q15061 677 aaKnown RBP eCLIP19.24■□□□□ 0.67
KCNMA1-239ENST00000638531 DNAJC10Q8IXB1 793 aa19.24■□□□□ 0.67
KCNMA1-239ENST00000638531 DCTN1Q14203 1278 aa19.22■□□□□ 0.67
KCNMA1-239ENST00000638531 SMIM5Q71RC9 77 aa19.22■□□□□ 0.67
KCNMA1-239ENST00000638531 ZNF496Q96IT1 587 aaPredicted RBP19.22■□□□□ 0.67
KCNMA1-239ENST00000638531 BTBD11A6QL63 1104 aa19.21■□□□□ 0.67
KCNMA1-239ENST00000638531 CYP19A1P11511 503 aaPredicted RBP19.21■□□□□ 0.67
KCNMA1-239ENST00000638531 MSL1Q68DK7 614 aa19.21■□□□□ 0.67
KCNMA1-239ENST00000638531 FHDC1Q9C0D6 1143 aaPredicted RBP19.21■□□□□ 0.67
KCNMA1-239ENST00000638531 KIAA1551Q9HCM1 1747 aa19.21■□□□□ 0.67
KCNMA1-239ENST00000638531 CCDC87Q9NVE4 849 aa19.21■□□□□ 0.67
KCNMA1-239ENST00000638531 AFDNP55196 1824 aaKnown RBP19.21■□□□□ 0.67
KCNMA1-239ENST00000638531 CHD4Q14839 1912 aa19.2■□□□□ 0.66
KCNMA1-239ENST00000638531 TRAPPC3LQ5T215 181 aa19.2■□□□□ 0.66
KCNMA1-239ENST00000638531 INTS5Q6P9B9 1019 aaKnown RBP19.2■□□□□ 0.66
KCNMA1-239ENST00000638531 FMNL2Q96PY5 1086 aa19.2■□□□□ 0.66
KCNMA1-239ENST00000638531 SOS1Q07889 1333 aaPredicted RBP19.2■□□□□ 0.66
KCNMA1-239ENST00000638531 COL15A1P39059 1388 aa19.19■□□□□ 0.66
KCNMA1-239ENST00000638531 NRXN2Q9P2S2 1712 aa19.18■□□□□ 0.66
KCNMA1-239ENST00000638531 SENP3-EIF4A1A0A087X0R7 540 aa19.18■□□□□ 0.66
KCNMA1-239ENST00000638531 ARHGEF1Q92888 912 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms