RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 WDR17Q8IZU2 1322 aa15.52■□□□□ 0.08
CACNA1D-228ENST00000638120 INTS3Q68E01 1043 aaKnown RBP15.52■□□□□ 0.07
CACNA1D-228ENST00000638120 STK31Q9BXU1 1019 aa15.52■□□□□ 0.07
CACNA1D-228ENST00000638120 SPG7Q9UQ90 795 aa15.52■□□□□ 0.07
CACNA1D-228ENST00000638120 HOXB7P09629 217 aa15.51■□□□□ 0.07
CACNA1D-228ENST00000638120 EIF4A1P60842 406 aaKnown RBP15.51■□□□□ 0.07
CACNA1D-228ENST00000638120 COL22A1Q8NFW1 1626 aaPredicted RBP15.51■□□□□ 0.07
CACNA1D-228ENST00000638120 BTBD11A6QL63 1104 aa15.5■□□□□ 0.07
CACNA1D-228ENST00000638120 KDM6AO15550 1401 aaPredicted RBP15.5■□□□□ 0.07
CACNA1D-228ENST00000638120 PHKG2P15735 406 aa15.5■□□□□ 0.07
CACNA1D-228ENST00000638120 N4BP2Q86UW6 1770 aaPredicted RBP15.49■□□□□ 0.07
CACNA1D-228ENST00000638120 MRC1P22897 1456 aa15.49■□□□□ 0.07
CACNA1D-228ENST00000638120 RGS3P49796 1198 aa15.49■□□□□ 0.07
CACNA1D-228ENST00000638120 G2E3Q7L622 706 aa15.49■□□□□ 0.07
CACNA1D-228ENST00000638120 PDE4AP27815 886 aa15.48■□□□□ 0.07
CACNA1D-228ENST00000638120 IFNL2Q8IZJ0 200 aa15.48■□□□□ 0.07
CACNA1D-228ENST00000638120 HDGFL1Q5TGJ6 251 aa15.47■□□□□ 0.07
CACNA1D-228ENST00000638120 BACH2Q9BYV9 841 aa15.47■□□□□ 0.07
CACNA1D-228ENST00000638120 KCNQ3O43525 872 aa15.47■□□□□ 0.07
CACNA1D-228ENST00000638120 TOM1L2Q6ZVM7 507 aa15.47■□□□□ 0.07
CACNA1D-228ENST00000638120 CHMP4AQ9BY43 222 aa15.47■□□□□ 0.07
CACNA1D-228ENST00000638120 PDZRN3Q9UPQ7 1066 aa15.47■□□□□ 0.07
CACNA1D-228ENST00000638120 HEG1Q9ULI3 1381 aa15.46■□□□□ 0.07
CACNA1D-228ENST00000638120 FLIIQ13045 1269 aa15.46■□□□□ 0.07
CACNA1D-228ENST00000638120 SMC5Q8IY18 1101 aa15.46■□□□□ 0.07
CACNA1D-228ENST00000638120 PXDNLA1KZ92 1463 aa15.46■□□□□ 0.07
CACNA1D-228ENST00000638120 COL14A1Q05707 1796 aaKnown RBP15.46■□□□□ 0.06
CACNA1D-228ENST00000638120 CYP27B1O15528 508 aa15.45■□□□□ 0.06
CACNA1D-228ENST00000638120 NECTIN2Q92692 538 aa15.45■□□□□ 0.06
CACNA1D-228ENST00000638120 CARD10Q9BWT7 1032 aa15.45■□□□□ 0.06
CACNA1D-228ENST00000638120 COL16A1Q07092 1604 aaPredicted RBP15.45■□□□□ 0.06
CACNA1D-228ENST00000638120 C1orf115Q9H7X2 142 aa15.45■□□□□ 0.06
CACNA1D-228ENST00000638120 SLC52A2Q9HAB3 445 aa15.45■□□□□ 0.06
CACNA1D-228ENST00000638120 HSP90AB1P08238 724 aaKnown RBP15.44■□□□□ 0.06
CACNA1D-228ENST00000638120 CCT4P50991 539 aaKnown RBP15.44■□□□□ 0.06
CACNA1D-228ENST00000638120 DCAF5Q96JK2 942 aa15.44■□□□□ 0.06
CACNA1D-228ENST00000638120 SHANK3Q9BYB0 1731 aa15.44■□□□□ 0.06
CACNA1D-228ENST00000638120 ATP10DQ9P241 1426 aa15.43■□□□□ 0.06
CACNA1D-228ENST00000638120 FKBP5Q13451 457 aaPredicted RBP15.43■□□□□ 0.06
CACNA1D-228ENST00000638120 PHLPP1O60346 1717 aa15.43■□□□□ 0.06
CACNA1D-228ENST00000638120 F6X3S4 739 aa15.43■□□□□ 0.06
CACNA1D-228ENST00000638120 LARP1Q6PKG0 1096 aaKnown RBP15.43■□□□□ 0.06
CACNA1D-228ENST00000638120 PCDH11XQ9BZA7 1347 aa15.42■□□□□ 0.06
CACNA1D-228ENST00000638120 PCDH11YQ9BZA8 1340 aa15.42■□□□□ 0.06
CACNA1D-228ENST00000638120 GIGYF1O75420 1035 aaPredicted RBP15.42■□□□□ 0.06
CACNA1D-228ENST00000638120 EIF2S2P20042 333 aaKnown RBP15.42■□□□□ 0.06
CACNA1D-228ENST00000638120 FAM161AQ3B820 660 aa15.42■□□□□ 0.06
CACNA1D-228ENST00000638120 STRN4Q9NRL3 753 aa15.42■□□□□ 0.06
CACNA1D-228ENST00000638120 IL2RBP14784 551 aa15.41■□□□□ 0.06
CACNA1D-228ENST00000638120 C8orf34Q49A92 452 aa15.41■□□□□ 0.06
CACNA1D-228ENST00000638120 SLC4A10Q6U841 1118 aa15.41■□□□□ 0.06
CACNA1D-228ENST00000638120 SIRT2Q8IXJ6 389 aa15.41■□□□□ 0.06
CACNA1D-228ENST00000638120 CHPF2Q9P2E5 772 aa15.41■□□□□ 0.06
CACNA1D-228ENST00000638120 C5P01031 1676 aa15.41■□□□□ 0.06
CACNA1D-228ENST00000638120 EVA1CP58658 441 aa15.4■□□□□ 0.06
CACNA1D-228ENST00000638120 ZNF790Q6PG37 636 aa15.4■□□□□ 0.06
CACNA1D-228ENST00000638120 ZCRB1Q8TBF4 217 aaKnown RBP15.4■□□□□ 0.06
CACNA1D-228ENST00000638120 GCC1Q96CN9 775 aa15.4■□□□□ 0.06
CACNA1D-228ENST00000638120 MEIS3Q99687 375 aa15.4■□□□□ 0.06
CACNA1D-228ENST00000638120 PHAXQ9H814 394 aaKnown RBP15.4■□□□□ 0.06
CACNA1D-228ENST00000638120 PLCH1Q4KWH8 1693 aa15.4■□□□□ 0.06
CACNA1D-228ENST00000638120 NUCB1Q02818 461 aa15.39■□□□□ 0.05
CACNA1D-228ENST00000638120 NFATC2IPQ8NCF5 419 aa15.39■□□□□ 0.05
CACNA1D-228ENST00000638120 DBF4Q9UBU7 674 aaPredicted RBP15.39■□□□□ 0.05
CACNA1D-228ENST00000638120 ANKRD44Q8N8A2 993 aa15.38■□□□□ 0.05
CACNA1D-228ENST00000638120 BTG4Q9NY30 223 aa15.38■□□□□ 0.05
CACNA1D-228ENST00000638120 GLI3P10071 1580 aa15.38■□□□□ 0.05
CACNA1D-228ENST00000638120 SLC39A6Q13433 755 aa15.38■□□□□ 0.05
CACNA1D-228ENST00000638120 RPAP2Q8IXW5 612 aaPredicted RBP15.38■□□□□ 0.05
CACNA1D-228ENST00000638120 NKX1-1Q15270 411 aaPredicted RBP15.37■□□□□ 0.05
CACNA1D-228ENST00000638120 CEP85Q6P2H3 762 aa15.37■□□□□ 0.05
CACNA1D-228ENST00000638120 PAPPAQ13219 1627 aa15.36■□□□□ 0.05
CACNA1D-228ENST00000638120 PRAMEF22A3QJZ6 481 aa15.36■□□□□ 0.05
CACNA1D-228ENST00000638120 CABP4P57796 275 aa15.36■□□□□ 0.05
CACNA1D-228ENST00000638120 LAMB4A4D0S4 1761 aa15.36■□□□□ 0.05
CACNA1D-228ENST00000638120 DISP2A7MBM2 1401 aa15.36■□□□□ 0.05
CACNA1D-228ENST00000638120 TOM1O60784 492 aa15.36■□□□□ 0.05
CACNA1D-228ENST00000638120 CHD1LQ86WJ1 897 aa15.36■□□□□ 0.05
CACNA1D-228ENST00000638120 WNK3Q9BYP7 1800 aa15.36■□□□□ 0.05
CACNA1D-228ENST00000638120 UBR2Q8IWV8 1755 aa15.35■□□□□ 0.05
CACNA1D-228ENST00000638120 ANXA1P04083 346 aa15.35■□□□□ 0.05
CACNA1D-228ENST00000638120 GNAI3P08754 354 aa15.35■□□□□ 0.05
CACNA1D-228ENST00000638120 TTC5Q8N0Z6 440 aa15.35■□□□□ 0.05
CACNA1D-228ENST00000638120 ZNF496Q96IT1 587 aaPredicted RBP15.35■□□□□ 0.05
CACNA1D-228ENST00000638120 NRAPQ86VF7 1730 aa15.35■□□□□ 0.05
CACNA1D-228ENST00000638120 TOGARAM1Q9Y4F4 1720 aa15.35■□□□□ 0.05
CACNA1D-228ENST00000638120 ERVV-2B6SEH9 535 aa15.34■□□□□ 0.05
CACNA1D-228ENST00000638120 ANP32AP39687 249 aaKnown RBP15.34■□□□□ 0.05
CACNA1D-228ENST00000638120 ADCY9O60503 1353 aa15.34■□□□□ 0.05
CACNA1D-228ENST00000638120 GNAI2P04899 355 aa15.33■□□□□ 0.05
CACNA1D-228ENST00000638120 PROSER3Q2NL68 480 aa15.33■□□□□ 0.05
CACNA1D-228ENST00000638120 DNAAF4Q8WXU2 420 aa15.33■□□□□ 0.05
CACNA1D-228ENST00000638120 FMNL2Q96PY5 1086 aa15.33■□□□□ 0.05
CACNA1D-228ENST00000638120 LNPKQ9C0E8 428 aa15.33■□□□□ 0.05
CACNA1D-228ENST00000638120 DDX21Q9NR30 783 aaKnown RBP eCLIP15.33■□□□□ 0.05
CACNA1D-228ENST00000638120 HYPKQ9NX55 129 aa15.33■□□□□ 0.05
CACNA1D-228ENST00000638120 PI4KAP2A4QPH2 592 aa15.33■□□□□ 0.04
CACNA1D-228ENST00000638120 PI4KAP1Q8N8J0 262 aa15.33■□□□□ 0.04
CACNA1D-228ENST00000638120 DCTPP1Q9H773 170 aa15.33■□□□□ 0.04
CACNA1D-228ENST00000638120 SNRPA1P09661 255 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms