RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 AMOTQ4VCS5 1084 aa26.76■■□□□ 1.87
CLN6-224ENST00000638076 APBB1O00213 710 aa26.75■■□□□ 1.87
CLN6-224ENST00000638076 GNAI2P04899 355 aa26.75■■□□□ 1.87
CLN6-224ENST00000638076 NCAPD2Q15021 1401 aa26.75■■□□□ 1.87
CLN6-224ENST00000638076 EIF4A1P60842 406 aaKnown RBP26.74■■□□□ 1.87
CLN6-224ENST00000638076 ATF3P18847 181 aa26.74■■□□□ 1.87
CLN6-224ENST00000638076 MPRIPQ6WCQ1 1025 aa26.74■■□□□ 1.87
CLN6-224ENST00000638076 CACNA1FO60840 1977 aa26.74■■□□□ 1.87
CLN6-224ENST00000638076 SMARCA5O60264 1052 aaPredicted RBP26.73■■□□□ 1.87
CLN6-224ENST00000638076 TEFQ10587 303 aa26.73■■□□□ 1.87
CLN6-224ENST00000638076 LMO7Q8WWI1 1683 aa26.73■■□□□ 1.87
CLN6-224ENST00000638076 TMEM94Q12767 1356 aa26.73■■□□□ 1.87
CLN6-224ENST00000638076 TTC22Q5TAA0 569 aa26.72■■□□□ 1.87
CLN6-224ENST00000638076 OTUD7AQ8TE49 926 aaPredicted RBP26.72■■□□□ 1.87
CLN6-224ENST00000638076 CDC45O75419 566 aa26.72■■□□□ 1.87
CLN6-224ENST00000638076 GNAI3P08754 354 aa26.72■■□□□ 1.87
CLN6-224ENST00000638076 FRAT2O75474 233 aaPredicted RBP26.71■■□□□ 1.87
CLN6-224ENST00000638076 EIF2S2P20042 333 aaKnown RBP26.71■■□□□ 1.87
CLN6-224ENST00000638076 C1orf141Q5JVX7 400 aa26.71■■□□□ 1.87
CLN6-224ENST00000638076 ANTXR1Q9H6X2 564 aa26.71■■□□□ 1.87
CLN6-224ENST00000638076 PHAXQ9H814 394 aaKnown RBP26.71■■□□□ 1.87
CLN6-224ENST00000638076 PXDNQ92626 1479 aa26.71■■□□□ 1.87
CLN6-224ENST00000638076 MST1RQ04912 1400 aa26.71■■□□□ 1.87
CLN6-224ENST00000638076 BTBD11A6QL63 1104 aa26.71■■□□□ 1.87
CLN6-224ENST00000638076 KCNQ3O43525 872 aa26.71■■□□□ 1.87
CLN6-224ENST00000638076 DNAJC5Q9H3Z4 198 aa26.7■■□□□ 1.86
CLN6-224ENST00000638076 ZC3H6P61129 1189 aaKnown RBP26.7■■□□□ 1.86
CLN6-224ENST00000638076 KDM3BQ7LBC6 1761 aa26.69■■□□□ 1.86
CLN6-224ENST00000638076 RNMTO43148 476 aaKnown RBP26.69■■□□□ 1.86
CLN6-224ENST00000638076 HOXB7P09629 217 aa26.69■■□□□ 1.86
CLN6-224ENST00000638076 PXDNLA1KZ92 1463 aa26.69■■□□□ 1.86
CLN6-224ENST00000638076 DDX17Q92841 729 aaKnown RBP26.68■■□□□ 1.86
CLN6-224ENST00000638076 ALS2Q96Q42 1657 aa26.67■■□□□ 1.86
CLN6-224ENST00000638076 CAMTA1Q9Y6Y1 1673 aa26.67■■□□□ 1.86
CLN6-224ENST00000638076 ERBB3P21860 1342 aa26.66■■□□□ 1.86
CLN6-224ENST00000638076 SPRYD3Q8NCJ5 442 aa26.66■■□□□ 1.86
CLN6-224ENST00000638076 STRCP1A6NGW2 1772 aa26.66■■□□□ 1.86
CLN6-224ENST00000638076 HSCBQ8IWL3 235 aa26.65■■□□□ 1.86
CLN6-224ENST00000638076 CHPF2Q9P2E5 772 aa26.65■■□□□ 1.86
CLN6-224ENST00000638076 USP44Q9H0E7 712 aa26.65■■□□□ 1.86
CLN6-224ENST00000638076 EXOC6BQ9Y2D4 811 aa26.65■■□□□ 1.86
CLN6-224ENST00000638076 DCCP43146 1447 aa26.64■■□□□ 1.86
CLN6-224ENST00000638076 ATP8B2P98198 1209 aa26.64■■□□□ 1.86
CLN6-224ENST00000638076 CHMP4AQ9BY43 222 aa26.64■■□□□ 1.86
CLN6-224ENST00000638076 LRRFIP2Q9Y608 721 aaKnown RBP26.64■■□□□ 1.86
CLN6-224ENST00000638076 N4BP2Q86UW6 1770 aaPredicted RBP26.64■■□□□ 1.85
CLN6-224ENST00000638076 RGPD5Q99666 1765 aa26.64■■□□□ 1.85
CLN6-224ENST00000638076 PNMA6EA0A0J9YXQ4 647 aa26.64■■□□□ 1.85
CLN6-224ENST00000638076 OVOS2A0A0G2JMS6 1433 aa26.63■■□□□ 1.85
CLN6-224ENST00000638076 KIF2CQ99661 725 aa26.62■■□□□ 1.85
CLN6-224ENST00000638076 NCOA3Q9Y6Q9 1424 aa26.62■■□□□ 1.85
CLN6-224ENST00000638076 SDSP20132 328 aa26.61■■□□□ 1.85
CLN6-224ENST00000638076 UBTFL1P0CB47 393 aaPredicted RBP26.61■■□□□ 1.85
CLN6-224ENST00000638076 SNX21Q969T3 373 aa26.6■■□□□ 1.85
CLN6-224ENST00000638076 SRCIN1Q9C0H9 1055 aa26.6■■□□□ 1.85
CLN6-224ENST00000638076 CADPS2Q86UW7 1296 aa26.6■■□□□ 1.85
CLN6-224ENST00000638076 EIF5BO60841 1220 aaKnown RBP26.59■■□□□ 1.85
CLN6-224ENST00000638076 ANXA1P04083 346 aa26.59■■□□□ 1.85
CLN6-224ENST00000638076 HSPA2P54652 639 aa26.59■■□□□ 1.85
CLN6-224ENST00000638076 NPHP3Q7Z494 1330 aa26.59■■□□□ 1.85
CLN6-224ENST00000638076 LRRCC1Q9C099 1032 aa26.58■■□□□ 1.85
CLN6-224ENST00000638076 OSBPL3Q9H4L5 887 aa26.58■■□□□ 1.85
CLN6-224ENST00000638076 NLRP2Q9NX02 1062 aa26.58■■□□□ 1.85
CLN6-224ENST00000638076 PI4KAP2A4QPH2 592 aa26.57■■□□□ 1.84
CLN6-224ENST00000638076 PI4KAP1Q8N8J0 262 aa26.57■■□□□ 1.84
CLN6-224ENST00000638076 PDE1AP54750 535 aa26.57■■□□□ 1.84
CLN6-224ENST00000638076 DNAAF4Q8WXU2 420 aa26.57■■□□□ 1.84
CLN6-224ENST00000638076 GIGYF1O75420 1035 aaPredicted RBP26.56■■□□□ 1.84
CLN6-224ENST00000638076 CABLES1Q8TDN4 633 aa26.56■■□□□ 1.84
CLN6-224ENST00000638076 RAPGEF4Q8WZA2 1011 aa26.56■■□□□ 1.84
CLN6-224ENST00000638076 DBF4Q9UBU7 674 aaPredicted RBP26.56■■□□□ 1.84
CLN6-224ENST00000638076 IBTKQ9P2D0 1353 aaPredicted RBP26.55■■□□□ 1.84
CLN6-224ENST00000638076 BEND3Q5T5X7 828 aa26.55■■□□□ 1.84
CLN6-224ENST00000638076 CASC1Q6TDU7 716 aa26.54■■□□□ 1.84
CLN6-224ENST00000638076 HEG1Q9ULI3 1381 aa26.54■■□□□ 1.84
CLN6-224ENST00000638076 GSE1Q14687 1217 aa26.54■■□□□ 1.84
CLN6-224ENST00000638076 TNS3Q68CZ2 1445 aa26.54■■□□□ 1.84
CLN6-224ENST00000638076 LMTK3Q96Q04 1460 aa26.53■■□□□ 1.84
CLN6-224ENST00000638076 SALL3Q9BXA9 1300 aa26.53■■□□□ 1.84
CLN6-224ENST00000638076 ADCY9O60503 1353 aa26.52■■□□□ 1.84
CLN6-224ENST00000638076 PRAMEF22A3QJZ6 481 aa26.52■■□□□ 1.84
CLN6-224ENST00000638076 NBPF7P0C2Y1 421 aaPredicted RBP26.52■■□□□ 1.84
CLN6-224ENST00000638076 SSH3Q8TE77 659 aa26.52■■□□□ 1.84
CLN6-224ENST00000638076 RBM42Q9BTD8 480 aaKnown RBP26.51■■□□□ 1.84
CLN6-224ENST00000638076 CHMP5Q9NZZ3 219 aa26.51■■□□□ 1.84
CLN6-224ENST00000638076 CSB-PGBD3P0DP91 1061 aa26.51■■□□□ 1.83
CLN6-224ENST00000638076 TATP17735 454 aaPredicted RBP26.51■■□□□ 1.83
CLN6-224ENST00000638076 USP26Q9BXU7 913 aa26.51■■□□□ 1.83
CLN6-224ENST00000638076 ADAMTS7Q9UKP4 1686 aa26.51■■□□□ 1.83
CLN6-224ENST00000638076 SIPA1L3O60292 1781 aaPredicted RBP26.51■■□□□ 1.83
CLN6-224ENST00000638076 CHRNA2Q15822 529 aa26.5■■□□□ 1.83
CLN6-224ENST00000638076 TSHZ3Q63HK5 1081 aa26.5■■□□□ 1.83
CLN6-224ENST00000638076 PPP1R42Q7Z4L9 355 aa26.5■■□□□ 1.83
CLN6-224ENST00000638076 MX1P20591 662 aa26.5■■□□□ 1.83
CLN6-224ENST00000638076 PROSER3Q2NL68 480 aa26.5■■□□□ 1.83
CLN6-224ENST00000638076 COL18A1P39060 1754 aa26.49■■□□□ 1.83
CLN6-224ENST00000638076 CD2BP2O95400 341 aaKnown RBP26.49■■□□□ 1.83
CLN6-224ENST00000638076 HSP90AB1P08238 724 aaKnown RBP26.49■■□□□ 1.83
CLN6-224ENST00000638076 SPATA31A3Q5VYP0 1347 aa26.48■■□□□ 1.83
CLN6-224ENST00000638076 SPG7Q9UQ90 795 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms