RNA–Protein interactions for RNA: ENST00000637671.1

SYNGAP1-223, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-223ENST00000637671 ARHGAP27Q6ZUM4 889 aa16.32■□□□□ 0.2
SYNGAP1-223ENST00000637671 IFNL2Q8IZJ0 200 aa16.32■□□□□ 0.2
SYNGAP1-223ENST00000637671 NLGN1Q8N2Q7 840 aa16.32■□□□□ 0.2
SYNGAP1-223ENST00000637671 RTCBQ9Y3I0 505 aaKnown RBP16.32■□□□□ 0.2
SYNGAP1-223ENST00000637671 MAP2P11137 1827 aaKnown RBP16.31■□□□□ 0.2
SYNGAP1-223ENST00000637671 PHKG2P15735 406 aa16.31■□□□□ 0.2
SYNGAP1-223ENST00000637671 CCDC87Q9NVE4 849 aa16.31■□□□□ 0.2
SYNGAP1-223ENST00000637671 C10orf71Q711Q0 1435 aa16.3■□□□□ 0.2
SYNGAP1-223ENST00000637671 A0A0G2JLW4 131 aa16.3■□□□□ 0.2
SYNGAP1-223ENST00000637671 ADRA2BP18089 450 aa16.3■□□□□ 0.2
SYNGAP1-223ENST00000637671 WASHC2AQ641Q2 1341 aa16.29■□□□□ 0.2
SYNGAP1-223ENST00000637671 FCHSD2O94868 740 aa16.29■□□□□ 0.2
SYNGAP1-223ENST00000637671 C16orf71Q8IYS4 520 aaPredicted RBP16.29■□□□□ 0.2
SYNGAP1-223ENST00000637671 EYA1Q99502 592 aa16.29■□□□□ 0.2
SYNGAP1-223ENST00000637671 ATG3Q9NT62 314 aa16.29■□□□□ 0.2
SYNGAP1-223ENST00000637671 NMRK2Q9NPI5 230 aa16.28■□□□□ 0.2
SYNGAP1-223ENST00000637671 PARP3Q9Y6F1 533 aa16.28■□□□□ 0.2
SYNGAP1-223ENST00000637671 KDRP35968 1356 aa16.27■□□□□ 0.2
SYNGAP1-223ENST00000637671 PLEKHG2Q9H7P9 1386 aa16.27■□□□□ 0.2
SYNGAP1-223ENST00000637671 KIF13BQ9NQT8 1826 aa16.27■□□□□ 0.2
SYNGAP1-223ENST00000637671 DPEP1P16444 411 aa16.27■□□□□ 0.2
SYNGAP1-223ENST00000637671 RFC4P35249 363 aa16.27■□□□□ 0.2
SYNGAP1-223ENST00000637671 DNAJC5GQ8N7S2 189 aa16.27■□□□□ 0.2
SYNGAP1-223ENST00000637671 CARD14Q9BXL6 1004 aa16.27■□□□□ 0.2
SYNGAP1-223ENST00000637671 ANKRD26Q9UPS8 1709 aa16.26■□□□□ 0.19
SYNGAP1-223ENST00000637671 RC3H1Q5TC82 1133 aaKnown RBP16.26■□□□□ 0.19
SYNGAP1-223ENST00000637671 RBM46Q8TBY0 533 aaKnown RBP16.26■□□□□ 0.19
SYNGAP1-223ENST00000637671 RBM42Q9BTD8 480 aaKnown RBP16.26■□□□□ 0.19
SYNGAP1-223ENST00000637671 CNTNAP4Q9C0A0 1308 aa16.25■□□□□ 0.19
SYNGAP1-223ENST00000637671 ERVV-2B6SEH9 535 aa16.25■□□□□ 0.19
SYNGAP1-223ENST00000637671 HSP90AB1P08238 724 aaKnown RBP16.25■□□□□ 0.19
SYNGAP1-223ENST00000637671 C9orf131Q5VYM1 1079 aa16.25■□□□□ 0.19
SYNGAP1-223ENST00000637671 ARHGEF1Q92888 912 aaKnown RBP16.25■□□□□ 0.19
SYNGAP1-223ENST00000637671 KDM2BQ8NHM5 1336 aa16.24■□□□□ 0.19
SYNGAP1-223ENST00000637671 N4BP2Q86UW6 1770 aaPredicted RBP16.24■□□□□ 0.19
SYNGAP1-223ENST00000637671 GYS1P13807 737 aa16.24■□□□□ 0.19
SYNGAP1-223ENST00000637671 C4AP0C0L4 1744 aa16.24■□□□□ 0.19
SYNGAP1-223ENST00000637671 KIAA1551Q9HCM1 1747 aa16.24■□□□□ 0.19
SYNGAP1-223ENST00000637671 RPS6KA4O75676 772 aa16.23■□□□□ 0.19
SYNGAP1-223ENST00000637671 FSTL1Q12841 308 aa16.23■□□□□ 0.19
SYNGAP1-223ENST00000637671 DCAF5Q96JK2 942 aa16.23■□□□□ 0.19
SYNGAP1-223ENST00000637671 PIM2Q9P1W9 311 aa16.23■□□□□ 0.19
SYNGAP1-223ENST00000637671 DALRD3Q5D0E6 543 aaKnown RBP16.22■□□□□ 0.19
SYNGAP1-223ENST00000637671 POLKQ9UBT6 870 aa16.22■□□□□ 0.19
SYNGAP1-223ENST00000637671 ZNF831Q5JPB2 1677 aa16.21■□□□□ 0.19
SYNGAP1-223ENST00000637671 CABP4P57796 275 aa16.21■□□□□ 0.19
SYNGAP1-223ENST00000637671 EIF4A2Q14240 407 aaKnown RBP16.21■□□□□ 0.19
SYNGAP1-223ENST00000637671 KLRG1Q96E93 195 aa16.21■□□□□ 0.19
SYNGAP1-223ENST00000637671 SLC4A9Q96Q91 983 aa16.21■□□□□ 0.19
SYNGAP1-223ENST00000637671 WDR90Q96KV7 1748 aa16.2■□□□□ 0.18
SYNGAP1-223ENST00000637671 PLEKHO1Q53GL0 409 aaPredicted RBP16.2■□□□□ 0.18
SYNGAP1-223ENST00000637671 RNF181Q9P0P0 153 aa16.2■□□□□ 0.18
SYNGAP1-223ENST00000637671 TNNT2P45379 298 aaPredicted RBP16.19■□□□□ 0.18
SYNGAP1-223ENST00000637671 ZNF530Q6P9A1 599 aaPredicted RBP16.19■□□□□ 0.18
SYNGAP1-223ENST00000637671 KCNA3P22001 575 aa16.18■□□□□ 0.18
SYNGAP1-223ENST00000637671 AMOTQ4VCS5 1084 aa16.18■□□□□ 0.18
SYNGAP1-223ENST00000637671 COL5A3P25940 1745 aaPredicted RBP16.18■□□□□ 0.18
SYNGAP1-223ENST00000637671 KCPQ6ZWJ8 1503 aa16.18■□□□□ 0.18
SYNGAP1-223ENST00000637671 PTCD1O75127 700 aaKnown RBP16.17■□□□□ 0.18
SYNGAP1-223ENST00000637671 CRKLP46109 303 aaKnown RBP16.17■□□□□ 0.18
SYNGAP1-223ENST00000637671 HTRA3P83110 453 aa16.17■□□□□ 0.18
SYNGAP1-223ENST00000637671 JMYQ8N9B5 988 aa16.17■□□□□ 0.18
SYNGAP1-223ENST00000637671 BRCA1P38398 1863 aaKnown RBP16.16■□□□□ 0.18
SYNGAP1-223ENST00000637671 MTHFSP49914 203 aa16.16■□□□□ 0.18
SYNGAP1-223ENST00000637671 C1orf141Q5JVX7 400 aa16.16■□□□□ 0.18
SYNGAP1-223ENST00000637671 SMC1BQ8NDV3 1235 aa16.16■□□□□ 0.18
SYNGAP1-223ENST00000637671 ARFGEF1Q9Y6D6 1849 aa16.16■□□□□ 0.18
SYNGAP1-223ENST00000637671 KDM6AO15550 1401 aaPredicted RBP16.16■□□□□ 0.18
SYNGAP1-223ENST00000637671 USP42Q9H9J4 1324 aaKnown RBP16.16■□□□□ 0.18
SYNGAP1-223ENST00000637671 FKBP8Q14318 412 aa16.15■□□□□ 0.18
SYNGAP1-223ENST00000637671 RRAGCQ9HB90 399 aa16.15■□□□□ 0.18
SYNGAP1-223ENST00000637671 SRP68Q9UHB9 627 aaKnown RBP16.15■□□□□ 0.18
SYNGAP1-223ENST00000637671 DDR1Q08345 913 aa16.14■□□□□ 0.17
SYNGAP1-223ENST00000637671 COL13A1Q5TAT6 717 aaPredicted RBP16.14■□□□□ 0.17
SYNGAP1-223ENST00000637671 POLR3GLQ9BT43 218 aa16.14■□□□□ 0.17
SYNGAP1-223ENST00000637671 ZC3H4Q9UPT8 1303 aaKnown RBP16.14■□□□□ 0.17
SYNGAP1-223ENST00000637671 PCNTO95613 3336 aa16.13■□□□□ 0.17
SYNGAP1-223ENST00000637671 CHRNA5P30532 468 aa16.13■□□□□ 0.17
SYNGAP1-223ENST00000637671 TNS4Q8IZW8 715 aa16.13■□□□□ 0.17
SYNGAP1-223ENST00000637671 TNRC6CQ9HCJ0 1690 aaKnown RBP16.13■□□□□ 0.17
SYNGAP1-223ENST00000637671 ZPR1O75312 459 aa16.12■□□□□ 0.17
SYNGAP1-223ENST00000637671 CAPN15O75808 1086 aa16.12■□□□□ 0.17
SYNGAP1-223ENST00000637671 POLRMTO00411 1230 aaKnown RBP16.11■□□□□ 0.17
SYNGAP1-223ENST00000637671 NFATC2IPQ8NCF5 419 aa16.11■□□□□ 0.17
SYNGAP1-223ENST00000637671 MYH14Q7Z406 1995 aaKnown RBP16.1■□□□□ 0.17
SYNGAP1-223ENST00000637671 LMNB1P20700 586 aa16.09■□□□□ 0.17
SYNGAP1-223ENST00000637671 INTS5Q6P9B9 1019 aaKnown RBP16.09■□□□□ 0.17
SYNGAP1-223ENST00000637671 VEGFAP15692 232 aaPredicted RBP16.08■□□□□ 0.16
SYNGAP1-223ENST00000637671 TM4SF1P30408 202 aa16.08■□□□□ 0.16
SYNGAP1-223ENST00000637671 RASSF7Q02833 373 aa16.08■□□□□ 0.16
SYNGAP1-223ENST00000637671 USPL1Q5W0Q7 1092 aa16.08■□□□□ 0.16
SYNGAP1-223ENST00000637671 AEBP1Q8IUX7 1158 aa16.08■□□□□ 0.16
SYNGAP1-223ENST00000637671 PRELPP51888 382 aa16.07■□□□□ 0.16
SYNGAP1-223ENST00000637671 TJP1Q07157 1748 aa16.07■□□□□ 0.16
SYNGAP1-223ENST00000637671 SOS1Q07889 1333 aaPredicted RBP16.06■□□□□ 0.16
SYNGAP1-223ENST00000637671 GLTPD2A6NH11 291 aa16.06■□□□□ 0.16
SYNGAP1-223ENST00000637671 SULT6B1Q6IMI4 303 aa16.06■□□□□ 0.16
SYNGAP1-223ENST00000637671 DNAJC10Q8IXB1 793 aa16.05■□□□□ 0.16
SYNGAP1-223ENST00000637671 TTLL6Q8N841 843 aa16.05■□□□□ 0.16
SYNGAP1-223ENST00000637671 COL15A1P39059 1388 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms