RNA–Protein interactions for RNA: ENST00000637537.1

CLN5-219, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 4

Gene CLN5, Length 2,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-219ENST00000637537 NUCB1Q02818 461 aa23.5■■□□□ 1.35
CLN5-219ENST00000637537 MEIS3Q99687 375 aa23.5■■□□□ 1.35
CLN5-219ENST00000637537 TEFQ10587 303 aa23.49■■□□□ 1.35
CLN5-219ENST00000637537 AMOTQ4VCS5 1084 aa23.49■■□□□ 1.35
CLN5-219ENST00000637537 C1orf141Q5JVX7 400 aa23.49■■□□□ 1.35
CLN5-219ENST00000637537 CCDC30Q5VVM6 783 aa23.49■■□□□ 1.35
CLN5-219ENST00000637537 SPATA31A3Q5VYP0 1347 aa23.49■■□□□ 1.35
CLN5-219ENST00000637537 NCAPD2Q15021 1401 aa23.48■■□□□ 1.35
CLN5-219ENST00000637537 ANKRD45Q5TZF3 282 aa23.48■■□□□ 1.35
CLN5-219ENST00000637537 VIRMAQ69YN4 1812 aaKnown RBP23.48■■□□□ 1.35
CLN5-219ENST00000637537 FLIIQ13045 1269 aa23.48■■□□□ 1.35
CLN5-219ENST00000637537 NFKBIBQ15653 356 aa23.48■■□□□ 1.35
CLN5-219ENST00000637537 EIF2S2P20042 333 aaKnown RBP23.47■■□□□ 1.35
CLN5-219ENST00000637537 FKBP5Q13451 457 aaPredicted RBP23.47■■□□□ 1.35
CLN5-219ENST00000637537 CHD1LQ86WJ1 897 aa23.47■■□□□ 1.35
CLN5-219ENST00000637537 BTBD11A6QL63 1104 aa23.46■■□□□ 1.35
CLN5-219ENST00000637537 CSB-PGBD3P0DP91 1061 aa23.46■■□□□ 1.35
CLN5-219ENST00000637537 HDGFL1Q5TGJ6 251 aa23.46■■□□□ 1.35
CLN5-219ENST00000637537 BABAM1Q9NWV8 329 aa23.46■■□□□ 1.35
CLN5-219ENST00000637537 SLAIN2Q9P270 581 aa23.46■■□□□ 1.35
CLN5-219ENST00000637537 RNMTO43148 476 aaKnown RBP23.46■■□□□ 1.35
CLN5-219ENST00000637537 EIF4A1P60842 406 aaKnown RBP23.46■■□□□ 1.35
CLN5-219ENST00000637537 LMO7Q8WWI1 1683 aa23.45■■□□□ 1.34
CLN5-219ENST00000637537 FAM208AQ9UK61 1670 aaKnown RBP23.44■■□□□ 1.34
CLN5-219ENST00000637537 GCC1Q96CN9 775 aa23.43■■□□□ 1.34
CLN5-219ENST00000637537 PHAXQ9H814 394 aaKnown RBP23.43■■□□□ 1.34
CLN5-219ENST00000637537 CAMTA1Q9Y6Y1 1673 aa23.43■■□□□ 1.34
CLN5-219ENST00000637537 SLC4A3P48751 1232 aa23.42■■□□□ 1.34
CLN5-219ENST00000637537 RAPGEF4Q8WZA2 1011 aa23.42■■□□□ 1.34
CLN5-219ENST00000637537 ATP10DQ9P241 1426 aa23.41■■□□□ 1.34
CLN5-219ENST00000637537 CEP85Q6P2H3 762 aa23.41■■□□□ 1.34
CLN5-219ENST00000637537 COL18A1P39060 1754 aa23.41■■□□□ 1.34
CLN5-219ENST00000637537 ANXA1P04083 346 aa23.4■■□□□ 1.34
CLN5-219ENST00000637537 CCT4P50991 539 aaKnown RBP23.39■■□□□ 1.33
CLN5-219ENST00000637537 ANKRD44Q8N8A2 993 aa23.39■■□□□ 1.33
CLN5-219ENST00000637537 CHPF2Q9P2E5 772 aa23.39■■□□□ 1.33
CLN5-219ENST00000637537 KDM3BQ7LBC6 1761 aa23.38■■□□□ 1.33
CLN5-219ENST00000637537 MEGF6O75095 1541 aa23.38■■□□□ 1.33
CLN5-219ENST00000637537 PRAMEF22A3QJZ6 481 aa23.38■■□□□ 1.33
CLN5-219ENST00000637537 APBB1O00213 710 aa23.37■■□□□ 1.33
CLN5-219ENST00000637537 CRYBG1Q9Y4K1 1723 aa23.37■■□□□ 1.33
CLN5-219ENST00000637537 SOS1Q07889 1333 aaPredicted RBP23.37■■□□□ 1.33
CLN5-219ENST00000637537 TATP17735 454 aaPredicted RBP23.36■■□□□ 1.33
CLN5-219ENST00000637537 DCTPP1Q9H773 170 aa23.36■■□□□ 1.33
CLN5-219ENST00000637537 RPAP2Q8IXW5 612 aaPredicted RBP23.35■■□□□ 1.33
CLN5-219ENST00000637537 CACNA1FO60840 1977 aa23.35■■□□□ 1.33
CLN5-219ENST00000637537 SOS2Q07890 1332 aaPredicted RBP23.35■■□□□ 1.33
CLN5-219ENST00000637537 PRDM11Q9NQV5 511 aa23.34■■□□□ 1.33
CLN5-219ENST00000637537 SLC39A6Q13433 755 aa23.34■■□□□ 1.33
CLN5-219ENST00000637537 C16orf71Q8IYS4 520 aaPredicted RBP23.33■■□□□ 1.33
CLN5-219ENST00000637537 PHKG2P15735 406 aa23.32■■□□□ 1.32
CLN5-219ENST00000637537 CPDO75976 1380 aa23.32■■□□□ 1.32
CLN5-219ENST00000637537 SMARCA5O60264 1052 aaPredicted RBP23.31■■□□□ 1.32
CLN5-219ENST00000637537 GIGYF1O75420 1035 aaPredicted RBP23.31■■□□□ 1.32
CLN5-219ENST00000637537 NFATC2IPQ8NCF5 419 aa23.31■■□□□ 1.32
CLN5-219ENST00000637537 SPG7Q9UQ90 795 aa23.31■■□□□ 1.32
CLN5-219ENST00000637537 MFAP1P55081 439 aaKnown RBP23.31■■□□□ 1.32
CLN5-219ENST00000637537 KDM6AO15550 1401 aaPredicted RBP23.31■■□□□ 1.32
CLN5-219ENST00000637537 CYP27B1O15528 508 aa23.3■■□□□ 1.32
CLN5-219ENST00000637537 HOXB7P09629 217 aa23.3■■□□□ 1.32
CLN5-219ENST00000637537 PROSER3Q2NL68 480 aa23.3■■□□□ 1.32
CLN5-219ENST00000637537 GNAI2P04899 355 aa23.3■■□□□ 1.32
CLN5-219ENST00000637537 PI4KAP2A4QPH2 592 aa23.29■■□□□ 1.32
CLN5-219ENST00000637537 PI4KAP1Q8N8J0 262 aa23.29■■□□□ 1.32
CLN5-219ENST00000637537 UPF2Q9HAU5 1272 aaKnown RBP23.29■■□□□ 1.32
CLN5-219ENST00000637537 OTUD7AQ8TE49 926 aaPredicted RBP23.29■■□□□ 1.32
CLN5-219ENST00000637537 OVOS2A0A0G2JMS6 1433 aa23.29■■□□□ 1.32
CLN5-219ENST00000637537 FAM43AQ8N2R8 423 aa23.28■■□□□ 1.32
CLN5-219ENST00000637537 USP44Q9H0E7 712 aa23.28■■□□□ 1.32
CLN5-219ENST00000637537 SLC52A2Q9HAB3 445 aa23.28■■□□□ 1.32
CLN5-219ENST00000637537 IFNL2Q8IZJ0 200 aa23.28■■□□□ 1.32
CLN5-219ENST00000637537 SIPA1L3O60292 1781 aaPredicted RBP23.28■■□□□ 1.32
CLN5-219ENST00000637537 TOM1L2Q6ZVM7 507 aa23.27■■□□□ 1.32
CLN5-219ENST00000637537 TBC1D32Q96NH3 1257 aa23.27■■□□□ 1.32
CLN5-219ENST00000637537 EIF5BO60841 1220 aaKnown RBP23.27■■□□□ 1.32
CLN5-219ENST00000637537 BMP2KLQ5H9B9 411 aa23.27■■□□□ 1.32
CLN5-219ENST00000637537 LRRFIP2Q9Y608 721 aaKnown RBP23.27■■□□□ 1.32
CLN5-219ENST00000637537 PNMA6EA0A0J9YXQ4 647 aa23.26■■□□□ 1.31
CLN5-219ENST00000637537 ZNF790Q6PG37 636 aa23.26■■□□□ 1.31
CLN5-219ENST00000637537 PLEKHM2Q8IWE5 1019 aa23.26■■□□□ 1.31
CLN5-219ENST00000637537 DAXXQ9UER7 740 aaPredicted RBP23.26■■□□□ 1.31
CLN5-219ENST00000637537 GNAI3P08754 354 aa23.26■■□□□ 1.31
CLN5-219ENST00000637537 DBF4Q9UBU7 674 aaPredicted RBP23.26■■□□□ 1.31
CLN5-219ENST00000637537 HEG1Q9ULI3 1381 aa23.26■■□□□ 1.31
CLN5-219ENST00000637537 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.25■■□□□ 1.31
CLN5-219ENST00000637537 EXOC6BQ9Y2D4 811 aa23.25■■□□□ 1.31
CLN5-219ENST00000637537 STRN4Q9NRL3 753 aa23.25■■□□□ 1.31
CLN5-219ENST00000637537 ADAMTS7Q9UKP4 1686 aa23.25■■□□□ 1.31
CLN5-219ENST00000637537 SCN11AQ9UI33 1791 aa23.24■■□□□ 1.31
CLN5-219ENST00000637537 HMMRO75330 724 aa23.24■■□□□ 1.31
CLN5-219ENST00000637537 DNAAF4Q8WXU2 420 aa23.24■■□□□ 1.31
CLN5-219ENST00000637537 SRCIN1Q9C0H9 1055 aa23.24■■□□□ 1.31
CLN5-219ENST00000637537 WDR17Q8IZU2 1322 aa23.24■■□□□ 1.31
CLN5-219ENST00000637537 UBTFL1P0CB47 393 aaPredicted RBP23.23■■□□□ 1.31
CLN5-219ENST00000637537 GSPT1P15170 499 aaKnown RBP23.23■■□□□ 1.31
CLN5-219ENST00000637537 ADCY9O60503 1353 aa23.22■■□□□ 1.31
CLN5-219ENST00000637537 NBPF7P0C2Y1 421 aaPredicted RBP23.22■■□□□ 1.31
CLN5-219ENST00000637537 PXDNLA1KZ92 1463 aa23.22■■□□□ 1.31
CLN5-219ENST00000637537 ABCC6O95255 1503 aa23.22■■□□□ 1.31
CLN5-219ENST00000637537 BEND3Q5T5X7 828 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms