RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 CCP110O43303 1012 aa18.74■□□□□ 0.59
CLN5-218ENST00000637397 STK11IPQ8N1F8 1099 aa18.74■□□□□ 0.59
CLN5-218ENST00000637397 ANKRD44Q8N8A2 993 aa18.74■□□□□ 0.59
CLN5-218ENST00000637397 WASLO00401 505 aaPredicted RBP18.74■□□□□ 0.59
CLN5-218ENST00000637397 BRPF1P55201 1214 aaPredicted RBP18.74■□□□□ 0.59
CLN5-218ENST00000637397 VPS37DQ86XT2 251 aa18.74■□□□□ 0.59
CLN5-218ENST00000637397 CCDC47Q96A33 483 aaKnown RBP18.74■□□□□ 0.59
CLN5-218ENST00000637397 ZMYND15Q9H091 742 aa18.74■□□□□ 0.59
CLN5-218ENST00000637397 ITSN2Q9NZM3 1697 aa18.74■□□□□ 0.59
CLN5-218ENST00000637397 WDR62O43379 1518 aa18.74■□□□□ 0.59
CLN5-218ENST00000637397 JMYQ8N9B5 988 aa18.74■□□□□ 0.59
CLN5-218ENST00000637397 ZNF830Q96NB3 372 aaPredicted RBP18.74■□□□□ 0.59
CLN5-218ENST00000637397 TFIP11Q9UBB9 837 aaKnown RBP18.74■□□□□ 0.59
CLN5-218ENST00000637397 PDE1AP54750 535 aa18.73■□□□□ 0.59
CLN5-218ENST00000637397 VPS53Q5VIR6 699 aa18.72■□□□□ 0.59
CLN5-218ENST00000637397 ZGPATQ8N5A5 531 aaKnown RBP18.72■□□□□ 0.59
CLN5-218ENST00000637397 VAMP4O75379 141 aa18.72■□□□□ 0.59
CLN5-218ENST00000637397 RRP12Q5JTH9 1297 aaKnown RBP18.72■□□□□ 0.59
CLN5-218ENST00000637397 C16orf45Q96MC5 204 aaPredicted RBP18.72■□□□□ 0.59
CLN5-218ENST00000637397 CCDC8Q9H0W5 538 aaPredicted RBP18.72■□□□□ 0.59
CLN5-218ENST00000637397 SYCP2Q9BX26 1530 aa18.72■□□□□ 0.59
CLN5-218ENST00000637397 ACBD3Q9H3P7 528 aa18.72■□□□□ 0.59
CLN5-218ENST00000637397 GJB2P29033 226 aa18.72■□□□□ 0.59
CLN5-218ENST00000637397 FKBP4Q02790 459 aaKnown RBP eCLIP18.72■□□□□ 0.59
CLN5-218ENST00000637397 CCDC158Q5M9N0 1113 aa18.72■□□□□ 0.59
CLN5-218ENST00000637397 TBC1D2BQ9UPU7 963 aa18.71■□□□□ 0.59
CLN5-218ENST00000637397 GIMAP6Q6P9H5 292 aa18.71■□□□□ 0.59
CLN5-218ENST00000637397 DNMT1P26358 1616 aaKnown RBP18.71■□□□□ 0.59
CLN5-218ENST00000637397 PTPN14Q15678 1187 aa18.71■□□□□ 0.59
CLN5-218ENST00000637397 USHBP1Q8N6Y0 703 aa18.7■□□□□ 0.58
CLN5-218ENST00000637397 BLMP54132 1417 aaPredicted RBP18.7■□□□□ 0.58
CLN5-218ENST00000637397 DYNC1I1O14576 645 aa18.7■□□□□ 0.58
CLN5-218ENST00000637397 UBE2HP62256 183 aa18.7■□□□□ 0.58
CLN5-218ENST00000637397 XBP1P17861 261 aa18.7■□□□□ 0.58
CLN5-218ENST00000637397 SART3Q15020 963 aaKnown RBP18.7■□□□□ 0.58
CLN5-218ENST00000637397 TTC39AQ5SRH9 613 aa18.7■□□□□ 0.58
CLN5-218ENST00000637397 ZKSCAN5Q9Y2L8 839 aa18.7■□□□□ 0.58
CLN5-218ENST00000637397 PPP1R42Q7Z4L9 355 aa18.69■□□□□ 0.58
CLN5-218ENST00000637397 DNAAF4Q8WXU2 420 aa18.69■□□□□ 0.58
CLN5-218ENST00000637397 DCTPP1Q9H773 170 aa18.69■□□□□ 0.58
CLN5-218ENST00000637397 CLIP2Q9UDT6 1046 aa18.69■□□□□ 0.58
CLN5-218ENST00000637397 A2MP01023 1474 aa18.69■□□□□ 0.58
CLN5-218ENST00000637397 SETQ01105 290 aaPredicted RBP18.69■□□□□ 0.58
CLN5-218ENST00000637397 PLEKHM2Q8IWE5 1019 aa18.69■□□□□ 0.58
CLN5-218ENST00000637397 TNNT1P13805 278 aa18.68■□□□□ 0.58
CLN5-218ENST00000637397 ESYT1Q9BSJ8 1104 aa18.68■□□□□ 0.58
CLN5-218ENST00000637397 RBM25P49756 843 aaKnown RBP18.68■□□□□ 0.58
CLN5-218ENST00000637397 FILIP1LQ4L180 1135 aa18.68■□□□□ 0.58
CLN5-218ENST00000637397 KDM5BQ9UGL1 1544 aa18.68■□□□□ 0.58
CLN5-218ENST00000637397 DUOX2Q9NRD8 1548 aa18.68■□□□□ 0.58
CLN5-218ENST00000637397 USP48Q86UV5 1035 aa18.68■□□□□ 0.58
CLN5-218ENST00000637397 PHACTR3Q96KR7 559 aa18.68■□□□□ 0.58
CLN5-218ENST00000637397 NAP1L1P55209 391 aaKnown RBP18.67■□□□□ 0.58
CLN5-218ENST00000637397 BRMS1Q9HCU9 246 aa18.67■□□□□ 0.58
CLN5-218ENST00000637397 POLKQ9UBT6 870 aa18.67■□□□□ 0.58
CLN5-218ENST00000637397 TATP17735 454 aaPredicted RBP18.67■□□□□ 0.58
CLN5-218ENST00000637397 UVSSAQ2YD98 709 aa18.67■□□□□ 0.58
CLN5-218ENST00000637397 CNPY2Q9Y2B0 182 aa18.67■□□□□ 0.58
CLN5-218ENST00000637397 ECHDC1Q9NTX5 307 aa18.67■□□□□ 0.58
CLN5-218ENST00000637397 GUCY1B3Q02153 619 aa18.67■□□□□ 0.58
CLN5-218ENST00000637397 DHX8Q14562 1220 aaKnown RBP18.67■□□□□ 0.58
CLN5-218ENST00000637397 RUFY1Q96T51 708 aa18.67■□□□□ 0.58
CLN5-218ENST00000637397 FANCAO15360 1455 aa18.67■□□□□ 0.58
CLN5-218ENST00000637397 KRT24Q2M2I5 525 aa18.66■□□□□ 0.58
CLN5-218ENST00000637397 CD109Q6YHK3 1445 aa18.66■□□□□ 0.58
CLN5-218ENST00000637397 ZSCAN22P10073 491 aaPredicted RBP18.66■□□□□ 0.58
CLN5-218ENST00000637397 TRMT1Q9NXH9 659 aaKnown RBP18.66■□□□□ 0.58
CLN5-218ENST00000637397 EIF2AK4Q9P2K8 1649 aaKnown RBP18.66■□□□□ 0.58
CLN5-218ENST00000637397 ZBTB7BO15156 539 aaPredicted RBP18.66■□□□□ 0.58
CLN5-218ENST00000637397 TTC12Q9H892 705 aaPredicted RBP18.66■□□□□ 0.58
CLN5-218ENST00000637397 FAM177BA6PVY3 158 aa18.66■□□□□ 0.58
CLN5-218ENST00000637397 SFPQP23246 707 aaKnown RBP eCLIP18.66■□□□□ 0.58
CLN5-218ENST00000637397 UBXN4Q92575 508 aa18.66■□□□□ 0.58
CLN5-218ENST00000637397 CWC15Q9P013 229 aaKnown RBP18.66■□□□□ 0.58
CLN5-218ENST00000637397 ERICH4A6NGS2 130 aa18.65■□□□□ 0.58
CLN5-218ENST00000637397 ZNF165P49910 485 aa18.65■□□□□ 0.58
CLN5-218ENST00000637397 CFAP100Q494V2 611 aa18.65■□□□□ 0.58
CLN5-218ENST00000637397 PPP4R3BQ5MIZ7 849 aa18.65■□□□□ 0.58
CLN5-218ENST00000637397 CAGE1Q8TC20 777 aa18.65■□□□□ 0.58
CLN5-218ENST00000637397 CEP89Q96ST8 783 aa18.65■□□□□ 0.58
CLN5-218ENST00000637397 MTMR7Q9Y216 660 aa18.65■□□□□ 0.58
CLN5-218ENST00000637397 NOLC1Q14978 699 aaKnown RBP eCLIP18.65■□□□□ 0.58
CLN5-218ENST00000637397 HSP90AB2PQ58FF8 381 aa18.65■□□□□ 0.58
CLN5-218ENST00000637397 AMOTL1Q8IY63 956 aa18.65■□□□□ 0.58
CLN5-218ENST00000637397 ANO10Q9NW15 660 aa18.65■□□□□ 0.58
CLN5-218ENST00000637397 DDX19AQ9NUU7 478 aaKnown RBP18.65■□□□□ 0.58
CLN5-218ENST00000637397 CEP126Q9P2H0 1117 aa18.65■□□□□ 0.58
CLN5-218ENST00000637397 KIF18AQ8NI77 898 aa18.64■□□□□ 0.58
CLN5-218ENST00000637397 USP26Q9BXU7 913 aa18.64■□□□□ 0.58
CLN5-218ENST00000637397 NPC1L1Q9UHC9 1359 aa18.64■□□□□ 0.58
CLN5-218ENST00000637397 OFD1O75665 1012 aa18.64■□□□□ 0.57
CLN5-218ENST00000637397 NOM1Q5C9Z4 860 aaKnown RBP18.64■□□□□ 0.57
CLN5-218ENST00000637397 NECAB1Q8N987 351 aa18.64■□□□□ 0.57
CLN5-218ENST00000637397 RHPN1Q8TCX5 695 aa18.64■□□□□ 0.57
CLN5-218ENST00000637397 SMARCE1Q969G3 411 aa18.64■□□□□ 0.57
CLN5-218ENST00000637397 CNNM1Q9NRU3 951 aa18.64■□□□□ 0.57
CLN5-218ENST00000637397 CEP85Q6P2H3 762 aa18.64■□□□□ 0.57
CLN5-218ENST00000637397 PI4KAP2A4QPH2 592 aa18.64■□□□□ 0.57
CLN5-218ENST00000637397 CBFA2T2O43439 604 aa18.64■□□□□ 0.57
CLN5-218ENST00000637397 PPFIBP1Q86W92 1011 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms