RNA–Protein interactions for RNA: ENST00000637368.1

NRXN1-256, Transcript of neurexin 1, human

TSL 5

Gene NRXN1, Length 736 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-256	ENST00000637368	CLN3	Q13286	438 aa		7.4	□□□□□ -1.22
NRXN1-256	ENST00000637368	RTL5	Q5HYW3	569 aa	Predicted RBP	7.4	□□□□□ -1.22
NRXN1-256	ENST00000637368	NLRP3	Q96P20	1036 aa		7.4	□□□□□ -1.22
NRXN1-256	ENST00000637368	C2CD2L	O14523	706 aa		7.39	□□□□□ -1.23
NRXN1-256	ENST00000637368	PRSS36	Q5K4E3	855 aa		7.39	□□□□□ -1.23
NRXN1-256	ENST00000637368	DZIP3	Q86Y13	1208 aa	Known RBP	7.39	□□□□□ -1.23
NRXN1-256	ENST00000637368		A0A1B0GTH6	734 aa		7.38	□□□□□ -1.23
NRXN1-256	ENST00000637368	CHSY3	Q70JA7	882 aa		7.38	□□□□□ -1.23
NRXN1-256	ENST00000637368	CCDC125	Q86Z20	511 aa		7.38	□□□□□ -1.23
NRXN1-256	ENST00000637368	PARP9	Q8IXQ6	854 aa		7.38	□□□□□ -1.23
NRXN1-256	ENST00000637368	COBL	O75128	1261 aa		7.37	□□□□□ -1.23
NRXN1-256	ENST00000637368	FGFR3	P22607	806 aa		7.37	□□□□□ -1.23
NRXN1-256	ENST00000637368	CTDSPL2	Q05D32	466 aa		7.37	□□□□□ -1.23
NRXN1-256	ENST00000637368	TRIM11	Q96F44	468 aa		7.36	□□□□□ -1.23
NRXN1-256	ENST00000637368	NDFIP2	Q9NV92	336 aa		7.36	□□□□□ -1.23
NRXN1-256	ENST00000637368	YBX3	P16989	372 aa	Known RBP eCLIP	7.35	□□□□□ -1.23
NRXN1-256	ENST00000637368	ERVK-9	P63128	1117 aa		7.35	□□□□□ -1.23
NRXN1-256	ENST00000637368	MCTP1	Q6DN14	999 aa		7.35	□□□□□ -1.23
NRXN1-256	ENST00000637368	BARGIN	Q6ZT62	677 aa		7.35	□□□□□ -1.23
NRXN1-256	ENST00000637368	GPAM	Q9HCL2	828 aa		7.35	□□□□□ -1.23
NRXN1-256	ENST00000637368	SPDYE3	A6NKU9	549 aa		7.34	□□□□□ -1.23
NRXN1-256	ENST00000637368	HYAL3	O43820	417 aa	Predicted RBP	7.34	□□□□□ -1.23
NRXN1-256	ENST00000637368	NR6A1	Q15406	480 aa		7.34	□□□□□ -1.23
NRXN1-256	ENST00000637368	CYP2U1	Q7Z449	544 aa		7.34	□□□□□ -1.23
NRXN1-256	ENST00000637368	PLVAP	Q9BX97	442 aa		7.34	□□□□□ -1.23
NRXN1-256	ENST00000637368	NEURL1B	A8MQ27	555 aa		7.33	□□□□□ -1.24
NRXN1-256	ENST00000637368	CSB-PGBD3	P0DP91	1061 aa		7.33	□□□□□ -1.24
NRXN1-256	ENST00000637368	EFHC2	Q5JST6	749 aa		7.33	□□□□□ -1.24
NRXN1-256	ENST00000637368	CC2D2B	Q6DHV5	1058 aa		7.33	□□□□□ -1.24
NRXN1-256	ENST00000637368	PGBD3	Q8N328	593 aa		7.33	□□□□□ -1.24
NRXN1-256	ENST00000637368	PNMA1	Q8ND90	353 aa		7.33	□□□□□ -1.24
NRXN1-256	ENST00000637368	LRRN4	Q8WUT4	740 aa		7.33	□□□□□ -1.24
NRXN1-256	ENST00000637368	ABHD17A	Q96GS6	310 aa		7.33	□□□□□ -1.24
NRXN1-256	ENST00000637368	RTN4	Q9NQC3	1192 aa	Known RBP	7.33	□□□□□ -1.24
NRXN1-256	ENST00000637368	AVEN	Q9NQS1	362 aa	Predicted RBP	7.33	□□□□□ -1.24
NRXN1-256	ENST00000637368	H2AFB1	P0C5Y9	115 aa		7.32	□□□□□ -1.24
NRXN1-256	ENST00000637368	H2AFB2	P0C5Z0	115 aa		7.32	□□□□□ -1.24
NRXN1-256	ENST00000637368	TXK	P42681	527 aa		7.32	□□□□□ -1.24
NRXN1-256	ENST00000637368	CLK2	P49760	499 aa	Known RBP	7.32	□□□□□ -1.24
NRXN1-256	ENST00000637368	CTBS	Q01459	385 aa		7.32	□□□□□ -1.24
NRXN1-256	ENST00000637368	PAX4	O43316	350 aa		7.31	□□□□□ -1.24
NRXN1-256	ENST00000637368	BNIP3L	O60238	219 aa		7.31	□□□□□ -1.24
NRXN1-256	ENST00000637368	APBA3	O96018	575 aa		7.31	□□□□□ -1.24
NRXN1-256	ENST00000637368	ADH6	P28332	368 aa		7.31	□□□□□ -1.24
NRXN1-256	ENST00000637368	PRRT3	Q5FWE3	981 aa		7.3	□□□□□ -1.24
NRXN1-256	ENST00000637368	NACC1	Q96RE7	527 aa		7.3	□□□□□ -1.24
NRXN1-256	ENST00000637368	ZMYND10	O75800	440 aa		7.29	□□□□□ -1.24
NRXN1-256	ENST00000637368	FMNL2	Q96PY5	1086 aa		7.29	□□□□□ -1.24
NRXN1-256	ENST00000637368	KRTAP4-9	Q9BYQ8	210 aa		7.29	□□□□□ -1.24
NRXN1-256	ENST00000637368	FIGNL1	Q6PIW4	674 aa		7.28	□□□□□ -1.24
NRXN1-256	ENST00000637368	CRISPLD1	Q9H336	500 aa		7.28	□□□□□ -1.24
NRXN1-256	ENST00000637368	RUBCNL	Q9H714	662 aa		7.28	□□□□□ -1.24
NRXN1-256	ENST00000637368	ARHGEF10L	Q9HCE6	1279 aa		7.28	□□□□□ -1.24
NRXN1-256	ENST00000637368	FAM182B	Q5T319	152 aa		7.27	□□□□□ -1.25
NRXN1-256	ENST00000637368	FCHSD1	Q86WN1	690 aa		7.27	□□□□□ -1.25
NRXN1-256	ENST00000637368	COL17A1	Q9UMD9	1497 aa	Predicted RBP	7.27	□□□□□ -1.25
NRXN1-256	ENST00000637368	ESYT1	Q9BSJ8	1104 aa		7.26	□□□□□ -1.25
NRXN1-256	ENST00000637368	TRAK2	O60296	914 aa		7.25	□□□□□ -1.25
NRXN1-256	ENST00000637368	MSX1	P28360	303 aa		7.25	□□□□□ -1.25
NRXN1-256	ENST00000637368	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	7.25	□□□□□ -1.25
NRXN1-256	ENST00000637368	PHKA2	P46019	1235 aa		7.24	□□□□□ -1.25
NRXN1-256	ENST00000637368	GNAS	Q5JWF2	1037 aa		7.24	□□□□□ -1.25
NRXN1-256	ENST00000637368	RNF20	Q5VTR2	975 aa		7.24	□□□□□ -1.25
NRXN1-256	ENST00000637368	KLF15	Q9UIH9	416 aa		7.24	□□□□□ -1.25
NRXN1-256	ENST00000637368	PCDHGC4	Q9Y5F7	938 aa		7.24	□□□□□ -1.25
NRXN1-256	ENST00000637368	GIGYF1	O75420	1035 aa	Predicted RBP	7.23	□□□□□ -1.25
NRXN1-256	ENST00000637368	GNRH1	P01148	92 aa		7.23	□□□□□ -1.25
NRXN1-256	ENST00000637368	ELN	P15502	786 aa		7.23	□□□□□ -1.25
NRXN1-256	ENST00000637368	CENPC	Q03188	943 aa		7.23	□□□□□ -1.25
NRXN1-256	ENST00000637368	CNKSR1	Q969H4	720 aa		7.23	□□□□□ -1.25
NRXN1-256	ENST00000637368	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	7.23	□□□□□ -1.25
NRXN1-256	ENST00000637368	RSPH6A	Q9H0K4	717 aa		7.23	□□□□□ -1.25
NRXN1-256	ENST00000637368	OSBPL3	Q9H4L5	887 aa		7.23	□□□□□ -1.25
NRXN1-256	ENST00000637368	TRIM66	O15016	1216 aa		7.22	□□□□□ -1.25
NRXN1-256	ENST00000637368	GTF2E1	P29083	439 aa	Predicted RBP	7.22	□□□□□ -1.25
NRXN1-256	ENST00000637368	DNAAF2	Q9NVR5	837 aa	Known RBP	7.22	□□□□□ -1.25
NRXN1-256	ENST00000637368	HRH3	Q9Y5N1	445 aa		7.22	□□□□□ -1.25
NRXN1-256	ENST00000637368	ARID1B	Q8NFD5	2236 aa	Predicted RBP	7.21	□□□□□ -1.25
NRXN1-256	ENST00000637368	SCTR	P47872	440 aa		7.21	□□□□□ -1.26
NRXN1-256	ENST00000637368	C4orf17	Q53FE4	359 aa		7.21	□□□□□ -1.26
NRXN1-256	ENST00000637368	IL2RA	P01589	272 aa		7.2	□□□□□ -1.26
NRXN1-256	ENST00000637368	ZNF468	Q5VIY5	522 aa	Predicted RBP	7.2	□□□□□ -1.26
NRXN1-256	ENST00000637368	NLRP8	Q86W28	1048 aa		7.2	□□□□□ -1.26
NRXN1-256	ENST00000637368	KRTAP4-2	Q9BYR5	136 aa		7.2	□□□□□ -1.26
NRXN1-256	ENST00000637368	TMEM214	Q6NUQ4	689 aa	Known RBP	7.19	□□□□□ -1.26
NRXN1-256	ENST00000637368	ZCCHC2	Q9C0B9	1178 aa	Known RBP	7.19	□□□□□ -1.26
NRXN1-256	ENST00000637368	FHDC1	Q9C0D6	1143 aa	Predicted RBP	7.19	□□□□□ -1.26
NRXN1-256	ENST00000637368	PRDM6	Q9NQX0	595 aa		7.19	□□□□□ -1.26
NRXN1-256	ENST00000637368	RAB6B	Q9NRW1	208 aa		7.19	□□□□□ -1.26
NRXN1-256	ENST00000637368	ELOA3C	A0A087WX78	387 aa	Predicted RBP	7.18	□□□□□ -1.26
NRXN1-256	ENST00000637368	ELOA3D	A6NLF2	546 aa	Predicted RBP	7.18	□□□□□ -1.26
NRXN1-256	ENST00000637368	FZD5	Q13467	585 aa		7.18	□□□□□ -1.26
NRXN1-256	ENST00000637368	ELOA3B	Q3SY89	546 aa		7.18	□□□□□ -1.26
NRXN1-256	ENST00000637368	ELOA3	Q8NG57	546 aa		7.18	□□□□□ -1.26
NRXN1-256	ENST00000637368	C1orf216	Q8TAB5	229 aa		7.18	□□□□□ -1.26
NRXN1-256	ENST00000637368	EPS8L1	Q8TE68	723 aa		7.18	□□□□□ -1.26
NRXN1-256	ENST00000637368	RNF112	Q9ULX5	631 aa		7.18	□□□□□ -1.26
NRXN1-256	ENST00000637368	C9orf172	C9J069	976 aa		7.17	□□□□□ -1.26
NRXN1-256	ENST00000637368	TRIM28	Q13263	835 aa	Known RBP	7.17	□□□□□ -1.26
NRXN1-256	ENST00000637368	ADGRE1	Q14246	886 aa		7.17	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms