RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 DIAPH1O60610 1272 aaKnown RBP20.29■□□□□ 0.84
CACNA1A-230ENST00000636768 PHF14O94880 888 aa20.29■□□□□ 0.84
CACNA1A-230ENST00000636768 HMOX1P09601 288 aa20.29■□□□□ 0.84
CACNA1A-230ENST00000636768 LINC00116Q8NCU8 138 aa20.29■□□□□ 0.84
CACNA1A-230ENST00000636768 C4BP0C0L5 1744 aa20.28■□□□□ 0.84
CACNA1A-230ENST00000636768 YY1P25490 414 aa20.28■□□□□ 0.84
CACNA1A-230ENST00000636768 ITPK1Q13572 414 aa20.27■□□□□ 0.84
CACNA1A-230ENST00000636768 RBM42Q9BTD8 480 aaKnown RBP20.27■□□□□ 0.84
CACNA1A-230ENST00000636768 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.26■□□□□ 0.83
CACNA1A-230ENST00000636768 GNPATO15228 680 aa20.25■□□□□ 0.83
CACNA1A-230ENST00000636768 SSFA2P28290 1259 aa20.25■□□□□ 0.83
CACNA1A-230ENST00000636768 AMIGO3Q86WK7 504 aa20.25■□□□□ 0.83
CACNA1A-230ENST00000636768 AKAP4Q5JQC9 854 aa20.24■□□□□ 0.83
CACNA1A-230ENST00000636768 SMIM5Q71RC9 77 aa20.24■□□□□ 0.83
CACNA1A-230ENST00000636768 TAF1LQ8IZX4 1826 aa20.24■□□□□ 0.83
CACNA1A-230ENST00000636768 U2SURPO15042 1029 aaKnown RBP20.23■□□□□ 0.83
CACNA1A-230ENST00000636768 NFATC2IPQ8NCF5 419 aa20.23■□□□□ 0.83
CACNA1A-230ENST00000636768 COL24A1Q17RW2 1714 aa20.22■□□□□ 0.83
CACNA1A-230ENST00000636768 PTCD1O75127 700 aaKnown RBP20.21■□□□□ 0.83
CACNA1A-230ENST00000636768 GPR162Q16538 588 aa20.21■□□□□ 0.83
CACNA1A-230ENST00000636768 PELP1Q8IZL8 1130 aaKnown RBP20.21■□□□□ 0.83
CACNA1A-230ENST00000636768 SLC4A9Q96Q91 983 aa20.21■□□□□ 0.83
CACNA1A-230ENST00000636768 COL3A1P02461 1466 aaPredicted RBP20.2■□□□□ 0.82
CACNA1A-230ENST00000636768 NLGN2Q8NFZ4 835 aa20.2■□□□□ 0.82
CACNA1A-230ENST00000636768 CFAP53Q96M91 514 aa20.2■□□□□ 0.82
CACNA1A-230ENST00000636768 MTHFSDQ2M296 383 aaKnown RBP20.19■□□□□ 0.82
CACNA1A-230ENST00000636768 RTCBQ9Y3I0 505 aaKnown RBP20.19■□□□□ 0.82
CACNA1A-230ENST00000636768 SLC52A2Q9HAB3 445 aa20.18■□□□□ 0.82
CACNA1A-230ENST00000636768 RNMTO43148 476 aaKnown RBP20.17■□□□□ 0.82
CACNA1A-230ENST00000636768 LGR6Q9HBX8 967 aa20.17■□□□□ 0.82
CACNA1A-230ENST00000636768 CNTNAP4Q9C0A0 1308 aa20.17■□□□□ 0.82
CACNA1A-230ENST00000636768 UBR3Q6ZT12 1888 aa20.17■□□□□ 0.82
CACNA1A-230ENST00000636768 TRAPPC3LQ5T215 181 aa20.16■□□□□ 0.82
CACNA1A-230ENST00000636768 RC3H1Q5TC82 1133 aaKnown RBP20.16■□□□□ 0.82
CACNA1A-230ENST00000636768 ADRA2BP18089 450 aa20.14■□□□□ 0.81
CACNA1A-230ENST00000636768 NUDCQ9Y266 331 aa20.14■□□□□ 0.81
CACNA1A-230ENST00000636768 CD2APQ9Y5K6 639 aa20.14■□□□□ 0.81
CACNA1A-230ENST00000636768 ZNF831Q5JPB2 1677 aa20.13■□□□□ 0.81
CACNA1A-230ENST00000636768 MRC1P22897 1456 aa20.13■□□□□ 0.81
CACNA1A-230ENST00000636768 RPS6KA4O75676 772 aa20.13■□□□□ 0.81
CACNA1A-230ENST00000636768 PPP2R1AP30153 589 aa20.13■□□□□ 0.81
CACNA1A-230ENST00000636768 GAS2L2Q8NHY3 880 aa20.13■□□□□ 0.81
CACNA1A-230ENST00000636768 RFC4P35249 363 aa20.12■□□□□ 0.81
CACNA1A-230ENST00000636768 CRKLP46109 303 aaKnown RBP20.12■□□□□ 0.81
CACNA1A-230ENST00000636768 SLC39A6Q13433 755 aa20.11■□□□□ 0.81
CACNA1A-230ENST00000636768 ARHGEF1Q92888 912 aaKnown RBP20.11■□□□□ 0.81
CACNA1A-230ENST00000636768 SCN11AQ9UI33 1791 aa20.11■□□□□ 0.81
CACNA1A-230ENST00000636768 GNAT3A8MTJ3 354 aa20.1■□□□□ 0.81
CACNA1A-230ENST00000636768 MMP10P09238 476 aa20.1■□□□□ 0.81
CACNA1A-230ENST00000636768 PRKAR2BP31323 418 aa20.1■□□□□ 0.81
CACNA1A-230ENST00000636768 U2AF1L5P0DN76 240 aaPredicted RBP20.09■□□□□ 0.81
CACNA1A-230ENST00000636768 U2AF1Q01081 240 aaKnown RBP eCLIP20.09■□□□□ 0.81
CACNA1A-230ENST00000636768 DNAJC10Q8IXB1 793 aa20.09■□□□□ 0.81
CACNA1A-230ENST00000636768 NLGN1Q8N2Q7 840 aa20.09■□□□□ 0.81
CACNA1A-230ENST00000636768 UTRNP46939 3433 aa20.08■□□□□ 0.81
CACNA1A-230ENST00000636768 COL5A3P25940 1745 aaPredicted RBP20.08■□□□□ 0.81
CACNA1A-230ENST00000636768 YBX3P16989 372 aaKnown RBP eCLIP20.08■□□□□ 0.81
CACNA1A-230ENST00000636768 TEFQ10587 303 aa20.08■□□□□ 0.81
CACNA1A-230ENST00000636768 RSPH6AQ9H0K4 717 aa20.08■□□□□ 0.81
CACNA1A-230ENST00000636768 GRIN3BO60391 1043 aa20.07■□□□□ 0.8
CACNA1A-230ENST00000636768 TTC5Q8N0Z6 440 aa20.07■□□□□ 0.8
CACNA1A-230ENST00000636768 GYS1P13807 737 aa20.06■□□□□ 0.8
CACNA1A-230ENST00000636768 PHACTR3Q96KR7 559 aa20.06■□□□□ 0.8
CACNA1A-230ENST00000636768 CCDC87Q9NVE4 849 aa20.06■□□□□ 0.8
CACNA1A-230ENST00000636768 INTS5Q6P9B9 1019 aaKnown RBP20.05■□□□□ 0.8
CACNA1A-230ENST00000636768 ZNF784Q8NCA9 323 aaPredicted RBP20.05■□□□□ 0.8
CACNA1A-230ENST00000636768 ADAMTS7Q9UKP4 1686 aa20.05■□□□□ 0.8
CACNA1A-230ENST00000636768 KCPQ6ZWJ8 1503 aa20.05■□□□□ 0.8
CACNA1A-230ENST00000636768 TJP1Q07157 1748 aa20.05■□□□□ 0.8
CACNA1A-230ENST00000636768 IL17REQ8NFR9 667 aa20.04■□□□□ 0.8
CACNA1A-230ENST00000636768 CICQ96RK0 1608 aaPredicted RBP20.04■□□□□ 0.8
CACNA1A-230ENST00000636768 USP42Q9H9J4 1324 aaKnown RBP20.03■□□□□ 0.8
CACNA1A-230ENST00000636768 CYP19A1P11511 503 aaPredicted RBP20.03■□□□□ 0.8
CACNA1A-230ENST00000636768 VSIG10Q8N0Z9 540 aa20.03■□□□□ 0.8
CACNA1A-230ENST00000636768 SRP68Q9UHB9 627 aaKnown RBP20.03■□□□□ 0.8
CACNA1A-230ENST00000636768 WWC3Q9ULE0 1092 aa20.03■□□□□ 0.8
CACNA1A-230ENST00000636768 PARP3Q9Y6F1 533 aa20.03■□□□□ 0.8
CACNA1A-230ENST00000636768 FCHSD2O94868 740 aa20.02■□□□□ 0.8
CACNA1A-230ENST00000636768 GOLGB1Q14789 3259 aaKnown RBP20.01■□□□□ 0.79
CACNA1A-230ENST00000636768 SOS1Q07889 1333 aaPredicted RBP20.01■□□□□ 0.79
CACNA1A-230ENST00000636768 CEMIPQ8WUJ3 1361 aa20■□□□□ 0.79
CACNA1A-230ENST00000636768 ZPR1O75312 459 aa20■□□□□ 0.79
CACNA1A-230ENST00000636768 ZNF790Q6PG37 636 aa20■□□□□ 0.79
CACNA1A-230ENST00000636768 RTF1Q92541 710 aaKnown RBP20■□□□□ 0.79
CACNA1A-230ENST00000636768 ZBTB1Q9Y2K1 713 aa20■□□□□ 0.79
CACNA1A-230ENST00000636768 MYH14Q7Z406 1995 aaKnown RBP20■□□□□ 0.79
CACNA1A-230ENST00000636768 STARD3NLO95772 234 aa19.99■□□□□ 0.79
CACNA1A-230ENST00000636768 FKBP8Q14318 412 aa19.99■□□□□ 0.79
CACNA1A-230ENST00000636768 ZNF496Q96IT1 587 aaPredicted RBP19.99■□□□□ 0.79
CACNA1A-230ENST00000636768 C4AP0C0L4 1744 aa19.99■□□□□ 0.79
CACNA1A-230ENST00000636768 COL15A1P39059 1388 aa19.98■□□□□ 0.79
CACNA1A-230ENST00000636768 BTBD11A6QL63 1104 aa19.98■□□□□ 0.79
CACNA1A-230ENST00000636768 NEFMP07197 916 aa19.98■□□□□ 0.79
CACNA1A-230ENST00000636768 C10orf71Q711Q0 1435 aa19.98■□□□□ 0.79
CACNA1A-230ENST00000636768 HEG1Q9ULI3 1381 aa19.97■□□□□ 0.79
CACNA1A-230ENST00000636768 CANXP27824 592 aaKnown RBP19.97■□□□□ 0.79
CACNA1A-230ENST00000636768 TGFB2P61812 414 aa19.97■□□□□ 0.79
CACNA1A-230ENST00000636768 USPL1Q5W0Q7 1092 aa19.97■□□□□ 0.79
CACNA1A-230ENST00000636768 FMNL2Q96PY5 1086 aa19.97■□□□□ 0.79
CACNA1A-230ENST00000636768 PXDNLA1KZ92 1463 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms