RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 PLEKHG2Q9H7P9 1386 aa13.91□□□□□ -0.18
CLN5-213ENST00000636681 SLC39A6Q13433 755 aa13.91□□□□□ -0.18
CLN5-213ENST00000636681 NGEFQ8N5V2 710 aa13.91□□□□□ -0.18
CLN5-213ENST00000636681 DCAF5Q96JK2 942 aa13.91□□□□□ -0.18
CLN5-213ENST00000636681 KCNQ2O43526 872 aa13.9□□□□□ -0.18
CLN5-213ENST00000636681 TEFQ10587 303 aa13.9□□□□□ -0.18
CLN5-213ENST00000636681 MRC1P22897 1456 aa13.9□□□□□ -0.18
CLN5-213ENST00000636681 CHL1O00533 1208 aa13.89□□□□□ -0.19
CLN5-213ENST00000636681 RXRBP28702 533 aa13.89□□□□□ -0.19
CLN5-213ENST00000636681 PDE3BQ13370 1112 aa13.89□□□□□ -0.19
CLN5-213ENST00000636681 CFAP44Q96MT7 982 aa13.89□□□□□ -0.19
CLN5-213ENST00000636681 SLC52A2Q9HAB3 445 aa13.89□□□□□ -0.19
CLN5-213ENST00000636681 E9PSI1 815 aa13.88□□□□□ -0.19
CLN5-213ENST00000636681 ELL2O00472 640 aaPredicted RBP13.88□□□□□ -0.19
CLN5-213ENST00000636681 PRIM1P49642 420 aaKnown RBP13.88□□□□□ -0.19
CLN5-213ENST00000636681 EXOSC9Q06265 439 aaKnown RBP13.88□□□□□ -0.19
CLN5-213ENST00000636681 TAF7Q15545 349 aaPredicted RBP13.88□□□□□ -0.19
CLN5-213ENST00000636681 TSPYL6Q8N831 410 aa13.88□□□□□ -0.19
CLN5-213ENST00000636681 SYTL4Q96C24 671 aaPredicted RBP13.88□□□□□ -0.19
CLN5-213ENST00000636681 IFT57Q9NWB7 429 aa13.88□□□□□ -0.19
CLN5-213ENST00000636681 TSPYL4Q9UJ04 414 aa13.88□□□□□ -0.19
CLN5-213ENST00000636681 IL16Q14005 1332 aa13.88□□□□□ -0.19
CLN5-213ENST00000636681 CABP4P57796 275 aa13.88□□□□□ -0.19
CLN5-213ENST00000636681 GNAI1P63096 354 aa13.88□□□□□ -0.19
CLN5-213ENST00000636681 C8orf58Q8NAV2 365 aa13.88□□□□□ -0.19
CLN5-213ENST00000636681 C5P01031 1676 aa13.88□□□□□ -0.19
CLN5-213ENST00000636681 PAPPAQ13219 1627 aa13.88□□□□□ -0.19
CLN5-213ENST00000636681 BTBD11A6QL63 1104 aa13.87□□□□□ -0.19
CLN5-213ENST00000636681 PIGBQ92521 554 aa13.87□□□□□ -0.19
CLN5-213ENST00000636681 BTAF1O14981 1849 aa13.87□□□□□ -0.19
CLN5-213ENST00000636681 UBR2Q8IWV8 1755 aa13.86□□□□□ -0.19
CLN5-213ENST00000636681 PRAMEF22A3QJZ6 481 aa13.86□□□□□ -0.19
CLN5-213ENST00000636681 HSP90AB1P08238 724 aaKnown RBP13.86□□□□□ -0.19
CLN5-213ENST00000636681 ASAP1Q9ULH1 1129 aa13.86□□□□□ -0.19
CLN5-213ENST00000636681 NHSQ6T4R5 1651 aa13.85□□□□□ -0.19
CLN5-213ENST00000636681 ERVV-2B6SEH9 535 aa13.85□□□□□ -0.19
CLN5-213ENST00000636681 TCERG1O14776 1098 aaKnown RBP13.85□□□□□ -0.19
CLN5-213ENST00000636681 KRT27Q7Z3Y8 459 aa13.85□□□□□ -0.19
CLN5-213ENST00000636681 MYH16Q9H6N6 1097 aa13.85□□□□□ -0.19
CLN5-213ENST00000636681 BCL9O00512 1426 aa13.84□□□□□ -0.19
CLN5-213ENST00000636681 CALD1Q05682 793 aaKnown RBP13.84□□□□□ -0.19
CLN5-213ENST00000636681 TMOD3Q9NYL9 352 aa13.84□□□□□ -0.19
CLN5-213ENST00000636681 EIF4A1P60842 406 aaKnown RBP13.83□□□□□ -0.2
CLN5-213ENST00000636681 NECTIN2Q92692 538 aa13.83□□□□□ -0.2
CLN5-213ENST00000636681 KCPQ6ZWJ8 1503 aa13.82□□□□□ -0.2
CLN5-213ENST00000636681 PTCD1O75127 700 aaKnown RBP13.82□□□□□ -0.2
CLN5-213ENST00000636681 CENPBP07199 599 aaPredicted RBP13.82□□□□□ -0.2
CLN5-213ENST00000636681 ZNF790Q6PG37 636 aa13.82□□□□□ -0.2
CLN5-213ENST00000636681 ZNF496Q96IT1 587 aaPredicted RBP13.82□□□□□ -0.2
CLN5-213ENST00000636681 BCL2L13Q9BXK5 485 aa13.82□□□□□ -0.2
CLN5-213ENST00000636681 ATG3Q9NT62 314 aa13.82□□□□□ -0.2
CLN5-213ENST00000636681 VAMP4O75379 141 aa13.81□□□□□ -0.2
CLN5-213ENST00000636681 KCNQ4P56696 695 aa13.81□□□□□ -0.2
CLN5-213ENST00000636681 SLC4A9Q96Q91 983 aa13.81□□□□□ -0.2
CLN5-213ENST00000636681 BCAR3O75815 825 aa13.8□□□□□ -0.2
CLN5-213ENST00000636681 TRIM37O94972 964 aa13.8□□□□□ -0.2
CLN5-213ENST00000636681 TWISTNBQ3B726 338 aaPredicted RBP13.8□□□□□ -0.2
CLN5-213ENST00000636681 TJP1Q07157 1748 aa13.79□□□□□ -0.2
CLN5-213ENST00000636681 HEG1Q9ULI3 1381 aa13.78□□□□□ -0.2
CLN5-213ENST00000636681 PIP4K2AP48426 406 aaPredicted RBP13.78□□□□□ -0.2
CLN5-213ENST00000636681 TTC5Q8N0Z6 440 aa13.78□□□□□ -0.2
CLN5-213ENST00000636681 RBM42Q9BTD8 480 aaKnown RBP13.78□□□□□ -0.2
CLN5-213ENST00000636681 RCAN3Q9UKA8 241 aa13.78□□□□□ -0.2
CLN5-213ENST00000636681 SUPT16HQ9Y5B9 1047 aaKnown RBP13.78□□□□□ -0.2
CLN5-213ENST00000636681 TNS1Q9HBL0 1735 aaKnown RBP13.77□□□□□ -0.2
CLN5-213ENST00000636681 LAMB4A4D0S4 1761 aa13.77□□□□□ -0.2
CLN5-213ENST00000636681 PLIN1O60240 522 aa13.77□□□□□ -0.21
CLN5-213ENST00000636681 GIGYF1O75420 1035 aaPredicted RBP13.77□□□□□ -0.21
CLN5-213ENST00000636681 ANXA1P04083 346 aa13.77□□□□□ -0.21
CLN5-213ENST00000636681 EIF2S2P20042 333 aaKnown RBP13.77□□□□□ -0.21
CLN5-213ENST00000636681 BABAM1Q9NWV8 329 aa13.77□□□□□ -0.21
CLN5-213ENST00000636681 TNNQ9UQP3 1299 aa13.77□□□□□ -0.21
CLN5-213ENST00000636681 USP16Q9Y5T5 823 aa13.77□□□□□ -0.21
CLN5-213ENST00000636681 LY75O60449 1722 aa13.77□□□□□ -0.21
CLN5-213ENST00000636681 MYH14Q7Z406 1995 aaKnown RBP13.76□□□□□ -0.21
CLN5-213ENST00000636681 RARSP54136 660 aaKnown RBP13.76□□□□□ -0.21
CLN5-213ENST00000636681 FAM196AQ6ZSG2 479 aa13.76□□□□□ -0.21
CLN5-213ENST00000636681 SSH1Q8WYL5 1049 aa13.76□□□□□ -0.21
CLN5-213ENST00000636681 TAF1LQ8IZX4 1826 aa13.75□□□□□ -0.21
CLN5-213ENST00000636681 FMNL2Q96PY5 1086 aa13.75□□□□□ -0.21
CLN5-213ENST00000636681 PALLDQ8WX93 1383 aa13.75□□□□□ -0.21
CLN5-213ENST00000636681 IRX6P78412 446 aaPredicted RBP13.74□□□□□ -0.21
CLN5-213ENST00000636681 PROSER3Q2NL68 480 aa13.74□□□□□ -0.21
CLN5-213ENST00000636681 DNAJC10Q8IXB1 793 aa13.74□□□□□ -0.21
CLN5-213ENST00000636681 CACNA1FO60840 1977 aa13.74□□□□□ -0.21
CLN5-213ENST00000636681 ITPK1Q13572 414 aa13.73□□□□□ -0.21
CLN5-213ENST00000636681 G2E3Q7L622 706 aa13.73□□□□□ -0.21
CLN5-213ENST00000636681 BCL11BQ9C0K0 894 aaPredicted RBP13.73□□□□□ -0.21
CLN5-213ENST00000636681 COL5A3P25940 1745 aaPredicted RBP13.73□□□□□ -0.21
CLN5-213ENST00000636681 HDGFL1Q5TGJ6 251 aa13.73□□□□□ -0.21
CLN5-213ENST00000636681 A1BGP04217 495 aa13.72□□□□□ -0.21
CLN5-213ENST00000636681 SNRPA1P09661 255 aaKnown RBP13.72□□□□□ -0.21
CLN5-213ENST00000636681 SMIM5Q71RC9 77 aa13.72□□□□□ -0.21
CLN5-213ENST00000636681 MRPL50Q8N5N7 158 aaKnown RBP13.72□□□□□ -0.21
CLN5-213ENST00000636681 SMC4Q9NTJ3 1288 aa13.72□□□□□ -0.21
CLN5-213ENST00000636681 CHPF2Q9P2E5 772 aa13.72□□□□□ -0.21
CLN5-213ENST00000636681 LOC102724428A0A0B4J2F2 783 aa13.71□□□□□ -0.21
CLN5-213ENST00000636681 SIK1P57059 783 aa13.71□□□□□ -0.21
CLN5-213ENST00000636681 PHAXQ9H814 394 aaKnown RBP13.71□□□□□ -0.21
CLN5-213ENST00000636681 ATP6V1AP38606 617 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms