RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 SUPT5HO00267 1087 aaKnown RBP5.22□□□□□ -1.57
PSPC1-208ENST00000635562 WASLO00401 505 aaPredicted RBP5.22□□□□□ -1.57
PSPC1-208ENST00000635562 PIK3R2O00459 728 aa5.22□□□□□ -1.57
PSPC1-208ENST00000635562 TRAK2O60296 914 aa5.22□□□□□ -1.57
PSPC1-208ENST00000635562 UBTFP17480 764 aaKnown RBP5.22□□□□□ -1.57
PSPC1-208ENST00000635562 GTPBP3Q969Y2 492 aaKnown RBP5.22□□□□□ -1.57
PSPC1-208ENST00000635562 POM121Q96HA1 1249 aa5.22□□□□□ -1.57
PSPC1-208ENST00000635562 COG6Q9Y2V7 657 aa5.22□□□□□ -1.57
PSPC1-208ENST00000635562 PCDHB11Q9Y5F2 797 aa5.22□□□□□ -1.57
PSPC1-208ENST00000635562 A0A1B0GTH6 734 aa5.21□□□□□ -1.58
PSPC1-208ENST00000635562 MSTNO14793 375 aa5.21□□□□□ -1.58
PSPC1-208ENST00000635562 POU4F2Q12837 409 aa5.21□□□□□ -1.58
PSPC1-208ENST00000635562 ESCO1Q5FWF5 840 aa5.21□□□□□ -1.58
PSPC1-208ENST00000635562 ESYT1Q9BSJ8 1104 aa5.21□□□□□ -1.58
PSPC1-208ENST00000635562 C1orf115Q9H7X2 142 aa5.21□□□□□ -1.58
PSPC1-208ENST00000635562 ARHGEF10LQ9HCE6 1279 aa5.21□□□□□ -1.58
PSPC1-208ENST00000635562 GDF2Q9UK05 429 aaPredicted RBP5.21□□□□□ -1.58
PSPC1-208ENST00000635562 GPR25O00155 361 aa5.2□□□□□ -1.58
PSPC1-208ENST00000635562 OIP5O43482 229 aa5.2□□□□□ -1.58
PSPC1-208ENST00000635562 GNASQ5JWF2 1037 aa5.2□□□□□ -1.58
PSPC1-208ENST00000635562 DCAF5Q96JK2 942 aa5.2□□□□□ -1.58
PSPC1-208ENST00000635562 OXCT2Q9BYC2 517 aaPredicted RBP5.2□□□□□ -1.58
PSPC1-208ENST00000635562 OSBPL3Q9H4L5 887 aa5.2□□□□□ -1.58
PSPC1-208ENST00000635562 PRM3Q9NNZ6 103 aa5.2□□□□□ -1.58
PSPC1-208ENST00000635562 GPR37L1O60883 481 aa5.19□□□□□ -1.58
PSPC1-208ENST00000635562 CSB-PGBD3P0DP91 1061 aa5.19□□□□□ -1.58
PSPC1-208ENST00000635562 SCTRP47872 440 aa5.19□□□□□ -1.58
PSPC1-208ENST00000635562 PROSER2Q86WR7 435 aaPredicted RBP5.19□□□□□ -1.58
PSPC1-208ENST00000635562 PGBD3Q8N328 593 aa5.19□□□□□ -1.58
PSPC1-208ENST00000635562 CNKSR1Q969H4 720 aa5.19□□□□□ -1.58
PSPC1-208ENST00000635562 ACDQ96AP0 544 aa5.19□□□□□ -1.58
PSPC1-208ENST00000635562 SIRT1Q96EB6 747 aa5.19□□□□□ -1.58
PSPC1-208ENST00000635562 MKL2Q9ULH7 1088 aa5.19□□□□□ -1.58
PSPC1-208ENST00000635562 PLA2G4EQ3MJ16 856 aa5.18□□□□□ -1.58
PSPC1-208ENST00000635562 GOLGA6L1Q8N7Z2 621 aa5.18□□□□□ -1.58
PSPC1-208ENST00000635562 GALNT6Q8NCL4 622 aa5.18□□□□□ -1.58
PSPC1-208ENST00000635562 ZSCAN10Q96SZ4 725 aaPredicted RBP5.18□□□□□ -1.58
PSPC1-208ENST00000635562 ATXN7L1Q9ULK2 861 aaPredicted RBP5.18□□□□□ -1.58
PSPC1-208ENST00000635562 CNTNAP5Q8WYK1 1306 aa5.18□□□□□ -1.58
PSPC1-208ENST00000635562 RAD21O60216 631 aa5.17□□□□□ -1.58
PSPC1-208ENST00000635562 EIF4G2P78344 907 aaKnown RBP eCLIP5.17□□□□□ -1.58
PSPC1-208ENST00000635562 CENPCQ03188 943 aa5.17□□□□□ -1.58
PSPC1-208ENST00000635562 EFHC2Q5JST6 749 aa5.17□□□□□ -1.58
PSPC1-208ENST00000635562 TMEM214Q6NUQ4 689 aaKnown RBP5.17□□□□□ -1.58
PSPC1-208ENST00000635562 SPOCK3Q9BQ16 436 aa5.17□□□□□ -1.58
PSPC1-208ENST00000635562 ADAM23O75077 832 aa5.16□□□□□ -1.58
PSPC1-208ENST00000635562 USP4Q13107 963 aa5.16□□□□□ -1.58
PSPC1-208ENST00000635562 FIGNL1Q6PIW4 674 aa5.16□□□□□ -1.58
PSPC1-208ENST00000635562 HOMEZQ8IX15 550 aa5.16□□□□□ -1.58
PSPC1-208ENST00000635562 C1orf216Q8TAB5 229 aa5.16□□□□□ -1.58
PSPC1-208ENST00000635562 RHBDD1Q8TEB9 315 aa5.16□□□□□ -1.58
PSPC1-208ENST00000635562 XAGE2Q96GT9 111 aa5.16□□□□□ -1.58
PSPC1-208ENST00000635562 GDPD2Q9HCC8 539 aa5.16□□□□□ -1.58
PSPC1-208ENST00000635562 CEP126Q9P2H0 1117 aa5.16□□□□□ -1.58
PSPC1-208ENST00000635562 TBC1D2BQ9UPU7 963 aa5.16□□□□□ -1.58
PSPC1-208ENST00000635562 IL2RAP01589 272 aa5.15□□□□□ -1.59
PSPC1-208ENST00000635562 IRF5Q13568 498 aa5.15□□□□□ -1.59
PSPC1-208ENST00000635562 RAB6BQ9NRW1 208 aa5.15□□□□□ -1.59
PSPC1-208ENST00000635562 HRH3Q9Y5N1 445 aa5.15□□□□□ -1.59
PSPC1-208ENST00000635562 ARID3CA6NKF2 412 aa5.14□□□□□ -1.59
PSPC1-208ENST00000635562 SLFNL1Q499Z3 407 aa5.14□□□□□ -1.59
PSPC1-208ENST00000635562 SLCO4C1Q6ZQN7 724 aa5.14□□□□□ -1.59
PSPC1-208ENST00000635562 KLRG1Q96E93 195 aa5.14□□□□□ -1.59
PSPC1-208ENST00000635562 FHDC1Q9C0D6 1143 aaPredicted RBP5.14□□□□□ -1.59
PSPC1-208ENST00000635562 CRISPLD1Q9H336 500 aa5.14□□□□□ -1.59
PSPC1-208ENST00000635562 GPAMQ9HCL2 828 aa5.14□□□□□ -1.59
PSPC1-208ENST00000635562 DOLKQ9UPQ8 538 aa5.14□□□□□ -1.59
PSPC1-208ENST00000635562 PROCP04070 461 aa5.13□□□□□ -1.59
PSPC1-208ENST00000635562 BMP4P12644 408 aa5.13□□□□□ -1.59
PSPC1-208ENST00000635562 C4orf17Q53FE4 359 aa5.13□□□□□ -1.59
PSPC1-208ENST00000635562 PPARGC1BQ86YN6 1023 aaKnown RBP5.13□□□□□ -1.59
PSPC1-208ENST00000635562 EDARADDQ8WWZ3 215 aa5.13□□□□□ -1.59
PSPC1-208ENST00000635562 RRAGCQ9HB90 399 aa5.13□□□□□ -1.59
PSPC1-208ENST00000635562 NOP53Q9NZM5 478 aaKnown RBP5.13□□□□□ -1.59
PSPC1-208ENST00000635562 GNB5O14775 395 aa5.12□□□□□ -1.59
PSPC1-208ENST00000635562 MSX1P28360 303 aa5.12□□□□□ -1.59
PSPC1-208ENST00000635562 PHKA2P46019 1235 aa5.12□□□□□ -1.59
PSPC1-208ENST00000635562 RANGAP1P46060 587 aaPredicted RBP5.12□□□□□ -1.59
PSPC1-208ENST00000635562 TBC1D9Q6ZT07 1266 aa5.12□□□□□ -1.59
PSPC1-208ENST00000635562 NLRP8Q86W28 1048 aa5.12□□□□□ -1.59
PSPC1-208ENST00000635562 CCDC85AQ96PX6 553 aaPredicted RBP5.12□□□□□ -1.59
PSPC1-208ENST00000635562 ZNF777Q9ULD5 760 aaPredicted RBP5.12□□□□□ -1.59
PSPC1-208ENST00000635562 SHISA8B8ZZ34 492 aa5.11□□□□□ -1.59
PSPC1-208ENST00000635562 K7ELQ4 463 aaPredicted RBP5.11□□□□□ -1.59
PSPC1-208ENST00000635562 ARAFP10398 606 aa5.11□□□□□ -1.59
PSPC1-208ENST00000635562 FGFR3P22607 806 aa5.11□□□□□ -1.59
PSPC1-208ENST00000635562 AMPD1P23109 780 aa5.11□□□□□ -1.59
PSPC1-208ENST00000635562 ABL2P42684 1182 aa5.11□□□□□ -1.59
PSPC1-208ENST00000635562 SNRPNP63162 240 aaKnown RBP5.11□□□□□ -1.59
PSPC1-208ENST00000635562 UBAP2LQ14157 1087 aaKnown RBP5.11□□□□□ -1.59
PSPC1-208ENST00000635562 TLR1Q15399 786 aa5.11□□□□□ -1.59
PSPC1-208ENST00000635562 MAP7D1Q3KQU3 841 aa5.11□□□□□ -1.59
PSPC1-208ENST00000635562 RNF135Q8IUD6 432 aa5.11□□□□□ -1.59
PSPC1-208ENST00000635562 RUBCNLQ9H714 662 aa5.11□□□□□ -1.59
PSPC1-208ENST00000635562 AVENQ9NQS1 362 aaPredicted RBP5.11□□□□□ -1.59
PSPC1-208ENST00000635562 POM121CA8CG34 1229 aa5.1□□□□□ -1.59
PSPC1-208ENST00000635562 ITGB2P05107 769 aa5.1□□□□□ -1.59
PSPC1-208ENST00000635562 THBS1P07996 1170 aa5.1□□□□□ -1.59
PSPC1-208ENST00000635562 NBPF1Q3BBV0 1214 aa5.1□□□□□ -1.59
PSPC1-208ENST00000635562 CCDC82Q8N4S0 544 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms