RNA–Protein interactions for RNA: ENST00000634363.1

SNRNP48-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-203ENST00000634363 EIF4A2Q14240 407 aaKnown RBP21.32■■□□□ 1
SNRNP48-203ENST00000634363 IGSF1Q8N6C5 1336 aa21.31■■□□□ 1
SNRNP48-203ENST00000634363 ZNF526Q8TF50 670 aaPredicted RBP21.31■■□□□ 1
SNRNP48-203ENST00000634363 ATG3Q9NT62 314 aa21.31■■□□□ 1
SNRNP48-203ENST00000634363 ATP10DQ9P241 1426 aa21.29■■□□□ 1
SNRNP48-203ENST00000634363 RBM42Q9BTD8 480 aaKnown RBP21.29■■□□□ 1
SNRNP48-203ENST00000634363 GPBP1L1Q9HC44 474 aaPredicted RBP21.29■■□□□ 1
SNRNP48-203ENST00000634363 PANK3Q9H999 370 aa21.26■□□□□ 0.99
SNRNP48-203ENST00000634363 MMP10P09238 476 aa21.25■□□□□ 0.99
SNRNP48-203ENST00000634363 PLEKHO1Q53GL0 409 aaPredicted RBP21.25■□□□□ 0.99
SNRNP48-203ENST00000634363 TRAPPC3LQ5T215 181 aa21.25■□□□□ 0.99
SNRNP48-203ENST00000634363 RTCBQ9Y3I0 505 aaKnown RBP21.25■□□□□ 0.99
SNRNP48-203ENST00000634363 ERVV-2B6SEH9 535 aa21.23■□□□□ 0.99
SNRNP48-203ENST00000634363 ZEB1P37275 1124 aaPredicted RBP21.23■□□□□ 0.99
SNRNP48-203ENST00000634363 DCAF5Q96JK2 942 aa21.23■□□□□ 0.99
SNRNP48-203ENST00000634363 HSP90AB1P08238 724 aaKnown RBP21.22■□□□□ 0.99
SNRNP48-203ENST00000634363 CABP4P57796 275 aa21.22■□□□□ 0.99
SNRNP48-203ENST00000634363 ZNF530Q6P9A1 599 aaPredicted RBP21.22■□□□□ 0.99
SNRNP48-203ENST00000634363 SLC4A9Q96Q91 983 aa21.22■□□□□ 0.99
SNRNP48-203ENST00000634363 MORC1Q86VD1 984 aa21.2■□□□□ 0.98
SNRNP48-203ENST00000634363 NLGN1Q8N2Q7 840 aa21.2■□□□□ 0.98
SNRNP48-203ENST00000634363 ARHGEF1Q92888 912 aaKnown RBP21.2■□□□□ 0.98
SNRNP48-203ENST00000634363 KIF7Q2M1P5 1343 aa21.2■□□□□ 0.98
SNRNP48-203ENST00000634363 N4BP2Q86UW6 1770 aaPredicted RBP21.19■□□□□ 0.98
SNRNP48-203ENST00000634363 A0A0G2JLW4 131 aa21.19■□□□□ 0.98
SNRNP48-203ENST00000634363 PTCD1O75127 700 aaKnown RBP21.19■□□□□ 0.98
SNRNP48-203ENST00000634363 RFC4P35249 363 aa21.19■□□□□ 0.98
SNRNP48-203ENST00000634363 MTHFSP49914 203 aa21.19■□□□□ 0.98
SNRNP48-203ENST00000634363 AMOTQ4VCS5 1084 aa21.18■□□□□ 0.98
SNRNP48-203ENST00000634363 C1orf141Q5JVX7 400 aa21.18■□□□□ 0.98
SNRNP48-203ENST00000634363 RC3H1Q5TC82 1133 aaKnown RBP21.18■□□□□ 0.98
SNRNP48-203ENST00000634363 BCS1LQ9Y276 419 aa21.18■□□□□ 0.98
SNRNP48-203ENST00000634363 ADCY9O60503 1353 aa21.18■□□□□ 0.98
SNRNP48-203ENST00000634363 AEBP1Q8IUX7 1158 aa21.17■□□□□ 0.98
SNRNP48-203ENST00000634363 KDRP35968 1356 aa21.17■□□□□ 0.98
SNRNP48-203ENST00000634363 RPS6KA4O75676 772 aa21.16■□□□□ 0.98
SNRNP48-203ENST00000634363 TGFB2P61812 414 aa21.16■□□□□ 0.98
SNRNP48-203ENST00000634363 NFATC2IPQ8NCF5 419 aa21.16■□□□□ 0.98
SNRNP48-203ENST00000634363 CICQ96RK0 1608 aaPredicted RBP21.15■□□□□ 0.98
SNRNP48-203ENST00000634363 GYS1P13807 737 aa21.15■□□□□ 0.98
SNRNP48-203ENST00000634363 ADRA2BP18089 450 aa21.15■□□□□ 0.98
SNRNP48-203ENST00000634363 SULT6B1Q6IMI4 303 aa21.15■□□□□ 0.98
SNRNP48-203ENST00000634363 ARHGAP27Q6ZUM4 889 aa21.15■□□□□ 0.98
SNRNP48-203ENST00000634363 CCDC87Q9NVE4 849 aa21.15■□□□□ 0.98
SNRNP48-203ENST00000634363 PARP3Q9Y6F1 533 aa21.15■□□□□ 0.98
SNRNP48-203ENST00000634363 KDM6AO15550 1401 aaPredicted RBP21.14■□□□□ 0.98
SNRNP48-203ENST00000634363 KNSTRNQ9Y448 316 aa21.14■□□□□ 0.97
SNRNP48-203ENST00000634363 PXDNLA1KZ92 1463 aa21.13■□□□□ 0.97
SNRNP48-203ENST00000634363 PLEKHG2Q9H7P9 1386 aa21.13■□□□□ 0.97
SNRNP48-203ENST00000634363 COL5A3P25940 1745 aaPredicted RBP21.13■□□□□ 0.97
SNRNP48-203ENST00000634363 CNTNAP4Q9C0A0 1308 aa21.13■□□□□ 0.97
SNRNP48-203ENST00000634363 HSPA6P17066 643 aa21.13■□□□□ 0.97
SNRNP48-203ENST00000634363 MYH14Q7Z406 1995 aaKnown RBP21.13■□□□□ 0.97
SNRNP48-203ENST00000634363 KIF13BQ9NQT8 1826 aa21.13■□□□□ 0.97
SNRNP48-203ENST00000634363 ZNF831Q5JPB2 1677 aa21.12■□□□□ 0.97
SNRNP48-203ENST00000634363 FCHSD2O94868 740 aa21.12■□□□□ 0.97
SNRNP48-203ENST00000634363 DPEP1P16444 411 aa21.12■□□□□ 0.97
SNRNP48-203ENST00000634363 CRKLP46109 303 aaKnown RBP21.11■□□□□ 0.97
SNRNP48-203ENST00000634363 SRP68Q9UHB9 627 aaKnown RBP21.1■□□□□ 0.97
SNRNP48-203ENST00000634363 C4AP0C0L4 1744 aa21.09■□□□□ 0.97
SNRNP48-203ENST00000634363 KIAA1551Q9HCM1 1747 aa21.09■□□□□ 0.97
SNRNP48-203ENST00000634363 KIF3CO14782 793 aa21.09■□□□□ 0.97
SNRNP48-203ENST00000634363 C10orf71Q711Q0 1435 aa21.08■□□□□ 0.97
SNRNP48-203ENST00000634363 IL13P35225 146 aa21.07■□□□□ 0.96
SNRNP48-203ENST00000634363 FKBP8Q14318 412 aa21.07■□□□□ 0.96
SNRNP48-203ENST00000634363 KCNA3P22001 575 aa21.05■□□□□ 0.96
SNRNP48-203ENST00000634363 LGR6Q9HBX8 967 aa21.05■□□□□ 0.96
SNRNP48-203ENST00000634363 PIM2Q9P1W9 311 aa21.05■□□□□ 0.96
SNRNP48-203ENST00000634363 SCN11AQ9UI33 1791 aa21.05■□□□□ 0.96
SNRNP48-203ENST00000634363 HMOX1P09601 288 aa21.04■□□□□ 0.96
SNRNP48-203ENST00000634363 AKAP4Q5JQC9 854 aa21.04■□□□□ 0.96
SNRNP48-203ENST00000634363 USP42Q9H9J4 1324 aaKnown RBP21.04■□□□□ 0.96
SNRNP48-203ENST00000634363 IFFO2Q5TF58 517 aa21.03■□□□□ 0.96
SNRNP48-203ENST00000634363 INTS5Q6P9B9 1019 aaKnown RBP21.03■□□□□ 0.96
SNRNP48-203ENST00000634363 DNAJC10Q8IXB1 793 aa21.03■□□□□ 0.96
SNRNP48-203ENST00000634363 BRCA1P38398 1863 aaKnown RBP21.03■□□□□ 0.96
SNRNP48-203ENST00000634363 TJP1Q07157 1748 aa21.02■□□□□ 0.96
SNRNP48-203ENST00000634363 ZPR1O75312 459 aa21.02■□□□□ 0.96
SNRNP48-203ENST00000634363 DDR1Q08345 913 aa21.02■□□□□ 0.96
SNRNP48-203ENST00000634363 SLC39A6Q13433 755 aa21.02■□□□□ 0.96
SNRNP48-203ENST00000634363 SLC52A2Q9HAB3 445 aa21.02■□□□□ 0.96
SNRNP48-203ENST00000634363 TOMM70O94826 608 aa21.01■□□□□ 0.95
SNRNP48-203ENST00000634363 CHRNA5P30532 468 aa21.01■□□□□ 0.95
SNRNP48-203ENST00000634363 DALRD3Q5D0E6 543 aaKnown RBP21.01■□□□□ 0.95
SNRNP48-203ENST00000634363 C9orf131Q5VYM1 1079 aa21.01■□□□□ 0.95
SNRNP48-203ENST00000634363 NMRK2Q9NPI5 230 aa21.01■□□□□ 0.95
SNRNP48-203ENST00000634363 RNMTO43148 476 aaKnown RBP21■□□□□ 0.95
SNRNP48-203ENST00000634363 AMER1Q5JTC6 1135 aaPredicted RBP21■□□□□ 0.95
SNRNP48-203ENST00000634363 USPL1Q5W0Q7 1092 aa21■□□□□ 0.95
SNRNP48-203ENST00000634363 CNGB1Q14028 1251 aaPredicted RBP20.99■□□□□ 0.95
SNRNP48-203ENST00000634363 VIRMAQ69YN4 1812 aaKnown RBP20.99■□□□□ 0.95
SNRNP48-203ENST00000634363 ARFGEF1Q9Y6D6 1849 aa20.99■□□□□ 0.95
SNRNP48-203ENST00000634363 TM4SF1P30408 202 aa20.98■□□□□ 0.95
SNRNP48-203ENST00000634363 CEP350Q5VT06 3117 aa20.98■□□□□ 0.95
SNRNP48-203ENST00000634363 POLRMTO00411 1230 aaKnown RBP20.97■□□□□ 0.95
SNRNP48-203ENST00000634363 CYP19A1P11511 503 aaPredicted RBP20.97■□□□□ 0.95
SNRNP48-203ENST00000634363 APLP1P51693 650 aa20.97■□□□□ 0.95
SNRNP48-203ENST00000634363 CC2D1BQ5T0F9 858 aaKnown RBP20.97■□□□□ 0.95
SNRNP48-203ENST00000634363 C16orf71Q8IYS4 520 aaPredicted RBP20.97■□□□□ 0.95
SNRNP48-203ENST00000634363 MTHFSDQ2M296 383 aaKnown RBP20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms