RNA–Protein interactions for RNA: ENST00000634338.1

SMARCA2-220, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-220ENST00000634338 ATAD2Q6PL18 1390 aa10.43□□□□□ -0.74
SMARCA2-220ENST00000634338 NDUFB5O43674 189 aa10.43□□□□□ -0.74
SMARCA2-220ENST00000634338 TNS4Q8IZW8 715 aa10.43□□□□□ -0.74
SMARCA2-220ENST00000634338 NKX2-3Q8TAU0 364 aa10.43□□□□□ -0.74
SMARCA2-220ENST00000634338 VTI1AQ96AJ9 217 aa10.43□□□□□ -0.74
SMARCA2-220ENST00000634338 P4HBP07237 508 aaKnown RBP10.42□□□□□ -0.74
SMARCA2-220ENST00000634338 MPSTP25325 297 aa10.42□□□□□ -0.74
SMARCA2-220ENST00000634338 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.42□□□□□ -0.74
SMARCA2-220ENST00000634338 ZBTB24O43167 697 aaPredicted RBP10.41□□□□□ -0.74
SMARCA2-220ENST00000634338 INHAP05111 366 aa10.41□□□□□ -0.74
SMARCA2-220ENST00000634338 WNT7BP56706 349 aa10.41□□□□□ -0.74
SMARCA2-220ENST00000634338 ZC3H6P61129 1189 aaKnown RBP10.41□□□□□ -0.74
SMARCA2-220ENST00000634338 TRIM32Q13049 653 aa10.41□□□□□ -0.74
SMARCA2-220ENST00000634338 C16orf46Q6P387 395 aa10.41□□□□□ -0.74
SMARCA2-220ENST00000634338 CITED4Q96RK1 184 aa10.41□□□□□ -0.74
SMARCA2-220ENST00000634338 KRTAP3-3Q9BYR6 98 aa10.41□□□□□ -0.74
SMARCA2-220ENST00000634338 KRTAP3-2Q9BYR7 98 aa10.41□□□□□ -0.74
SMARCA2-220ENST00000634338 TSPAN10Q9H1Z9 355 aaPredicted RBP10.41□□□□□ -0.74
SMARCA2-220ENST00000634338 TREHO43280 583 aa10.4□□□□□ -0.74
SMARCA2-220ENST00000634338 FMR1Q06787 632 aaKnown RBP eCLIP10.4□□□□□ -0.74
SMARCA2-220ENST00000634338 DHX9Q08211 1270 aaKnown RBP10.4□□□□□ -0.74
SMARCA2-220ENST00000634338 MRPL58Q14197 206 aaKnown RBP10.4□□□□□ -0.74
SMARCA2-220ENST00000634338 TSNAXIP1Q2TAA8 658 aa10.4□□□□□ -0.74
SMARCA2-220ENST00000634338 SLC4A9Q96Q91 983 aa10.4□□□□□ -0.74
SMARCA2-220ENST00000634338 BRPF3Q9ULD4 1205 aa10.4□□□□□ -0.74
SMARCA2-220ENST00000634338 STAG2Q8N3U4 1231 aa10.39□□□□□ -0.75
SMARCA2-220ENST00000634338 SREK1Q8WXA9 508 aaKnown RBP10.39□□□□□ -0.75
SMARCA2-220ENST00000634338 ETNK1Q9HBU6 452 aa10.39□□□□□ -0.75
SMARCA2-220ENST00000634338 STAU1O95793 577 aaKnown RBP10.38□□□□□ -0.75
SMARCA2-220ENST00000634338 SKOR1P84550 965 aa10.38□□□□□ -0.75
SMARCA2-220ENST00000634338 FGD1P98174 961 aa10.38□□□□□ -0.75
SMARCA2-220ENST00000634338 ALKBH2Q6NS38 261 aa10.38□□□□□ -0.75
SMARCA2-220ENST00000634338 CDK15Q96Q40 435 aa10.38□□□□□ -0.75
SMARCA2-220ENST00000634338 SAP130Q9H0E3 1048 aa10.38□□□□□ -0.75
SMARCA2-220ENST00000634338 CYLDQ9NQC7 956 aa10.38□□□□□ -0.75
SMARCA2-220ENST00000634338 PPP1R12BO60237 982 aaPredicted RBP10.37□□□□□ -0.75
SMARCA2-220ENST00000634338 PTPN5P54829 565 aa10.37□□□□□ -0.75
SMARCA2-220ENST00000634338 FOXK2Q01167 660 aa10.37□□□□□ -0.75
SMARCA2-220ENST00000634338 CYP2U1Q7Z449 544 aa10.37□□□□□ -0.75
SMARCA2-220ENST00000634338 CHMP7Q8WUX9 453 aaPredicted RBP10.37□□□□□ -0.75
SMARCA2-220ENST00000634338 DRC1Q96MC2 740 aa10.37□□□□□ -0.75
SMARCA2-220ENST00000634338 SERTAD1Q9UHV2 236 aa10.37□□□□□ -0.75
SMARCA2-220ENST00000634338 A0A1W2PRU2 124 aa10.36□□□□□ -0.75
SMARCA2-220ENST00000634338 FSHRP23945 695 aa10.36□□□□□ -0.75
SMARCA2-220ENST00000634338 EIF1AXP47813 144 aaKnown RBP10.36□□□□□ -0.75
SMARCA2-220ENST00000634338 DMRTB1Q96MA1 342 aa10.36□□□□□ -0.75
SMARCA2-220ENST00000634338 BACH2Q9BYV9 841 aa10.36□□□□□ -0.75
SMARCA2-220ENST00000634338 PRKD2Q9BZL6 878 aa10.36□□□□□ -0.75
SMARCA2-220ENST00000634338 TMPRSS4Q9NRS4 437 aa10.36□□□□□ -0.75
SMARCA2-220ENST00000634338 PPEF1O14829 653 aaPredicted RBP10.35□□□□□ -0.75
SMARCA2-220ENST00000634338 GNRH1P01148 92 aa10.35□□□□□ -0.75
SMARCA2-220ENST00000634338 DSC3Q14574 896 aa10.35□□□□□ -0.75
SMARCA2-220ENST00000634338 ESCO1Q5FWF5 840 aa10.35□□□□□ -0.75
SMARCA2-220ENST00000634338 SLC9A9Q8IVB4 645 aa10.35□□□□□ -0.75
SMARCA2-220ENST00000634338 ZNF784Q8NCA9 323 aaPredicted RBP10.35□□□□□ -0.75
SMARCA2-220ENST00000634338 C2orf49Q9BVC5 232 aaPredicted RBP10.35□□□□□ -0.75
SMARCA2-220ENST00000634338 SCHIP1Q9P0W5 487 aaPredicted RBP10.35□□□□□ -0.75
SMARCA2-220ENST00000634338 STIM2Q9P246 746 aa10.35□□□□□ -0.75
SMARCA2-220ENST00000634338 TNFRSF10BO14763 440 aa10.34□□□□□ -0.75
SMARCA2-220ENST00000634338 SCAMP3O14828 347 aaKnown RBP10.34□□□□□ -0.75
SMARCA2-220ENST00000634338 FZD6O60353 706 aa10.34□□□□□ -0.75
SMARCA2-220ENST00000634338 MTFR1Q15390 333 aa10.34□□□□□ -0.75
SMARCA2-220ENST00000634338 MPNDQ8N594 471 aa10.34□□□□□ -0.75
SMARCA2-220ENST00000634338 ANKLE1Q8NAG6 615 aa10.34□□□□□ -0.75
SMARCA2-220ENST00000634338 EHBP1Q8NDI1 1231 aa10.34□□□□□ -0.75
SMARCA2-220ENST00000634338 FAM129BQ96TA1 746 aa10.34□□□□□ -0.75
SMARCA2-220ENST00000634338 A6NJY4 79 aa10.33□□□□□ -0.76
SMARCA2-220ENST00000634338 PRPF40AO75400 957 aaKnown RBP10.33□□□□□ -0.76
SMARCA2-220ENST00000634338 IGHA2P01877 340 aa10.33□□□□□ -0.76
SMARCA2-220ENST00000634338 ITGAEP38570 1179 aa10.33□□□□□ -0.76
SMARCA2-220ENST00000634338 PSMA6P60900 246 aaKnown RBP10.33□□□□□ -0.76
SMARCA2-220ENST00000634338 ARID5BQ14865 1188 aa10.33□□□□□ -0.76
SMARCA2-220ENST00000634338 COX20Q5RI15 118 aa10.33□□□□□ -0.76
SMARCA2-220ENST00000634338 ABTB2Q8N961 1025 aa10.33□□□□□ -0.76
SMARCA2-220ENST00000634338 TMC1Q8TDI8 760 aa10.33□□□□□ -0.76
SMARCA2-220ENST00000634338 RNF223E7ERA6 249 aa10.32□□□□□ -0.76
SMARCA2-220ENST00000634338 LILRA1O75019 489 aa10.32□□□□□ -0.76
SMARCA2-220ENST00000634338 GRM5P41594 1212 aa10.32□□□□□ -0.76
SMARCA2-220ENST00000634338 SMTNP53814 917 aa10.32□□□□□ -0.76
SMARCA2-220ENST00000634338 MYT1Q01538 1121 aa10.32□□□□□ -0.76
SMARCA2-220ENST00000634338 PLCB3Q01970 1234 aa10.32□□□□□ -0.76
SMARCA2-220ENST00000634338 EHHADHQ08426 723 aa10.32□□□□□ -0.76
SMARCA2-220ENST00000634338 PDE3BQ13370 1112 aa10.32□□□□□ -0.76
SMARCA2-220ENST00000634338 NAALADL2Q58DX5 795 aa10.32□□□□□ -0.76
SMARCA2-220ENST00000634338 PLA2G2CQ5R387 149 aa10.32□□□□□ -0.76
SMARCA2-220ENST00000634338 ALKBH8Q96BT7 664 aaKnown RBP10.32□□□□□ -0.76
SMARCA2-220ENST00000634338 MYO19Q96H55 970 aa10.32□□□□□ -0.76
SMARCA2-220ENST00000634338 CCDC87Q9NVE4 849 aa10.32□□□□□ -0.76
SMARCA2-220ENST00000634338 LDHBP07195 334 aaKnown RBP10.31□□□□□ -0.76
SMARCA2-220ENST00000634338 ERCC5P28715 1186 aaPredicted RBP10.31□□□□□ -0.76
SMARCA2-220ENST00000634338 RPIAP49247 311 aa10.31□□□□□ -0.76
SMARCA2-220ENST00000634338 XPCQ01831 940 aaPredicted RBP10.31□□□□□ -0.76
SMARCA2-220ENST00000634338 POTEAQ6S8J7 498 aa10.31□□□□□ -0.76
SMARCA2-220ENST00000634338 CCDC116Q8IYX3 515 aa10.31□□□□□ -0.76
SMARCA2-220ENST00000634338 QTRT2Q9H974 415 aaKnown RBP10.31□□□□□ -0.76
SMARCA2-220ENST00000634338 MAPK8P45983 427 aa10.3□□□□□ -0.76
SMARCA2-220ENST00000634338 HDLBPQ00341 1268 aaKnown RBP10.3□□□□□ -0.76
SMARCA2-220ENST00000634338 AAMPQ13685 434 aa10.3□□□□□ -0.76
SMARCA2-220ENST00000634338 SF3A1Q15459 793 aaKnown RBP10.3□□□□□ -0.76
SMARCA2-220ENST00000634338 TBCELQ5QJ74 424 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms