RNA–Protein interactions for RNA: ENST00000633813.1

LINC00254-202, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-202ENST00000633813 ZSCAN10Q96SZ4 725 aaPredicted RBP9.61□□□□□ -0.87
LINC00254-202ENST00000633813 VRTNQ9H8Y1 702 aa9.61□□□□□ -0.87
LINC00254-202ENST00000633813 EIF4G1Q04637 1599 aaKnown RBP9.61□□□□□ -0.87
LINC00254-202ENST00000633813 RASA1P20936 1047 aa9.6□□□□□ -0.87
LINC00254-202ENST00000633813 TLR1Q15399 786 aa9.6□□□□□ -0.87
LINC00254-202ENST00000633813 CFAP70Q5T0N1 1121 aa9.6□□□□□ -0.87
LINC00254-202ENST00000633813 LARP1Q6PKG0 1096 aaKnown RBP9.6□□□□□ -0.87
LINC00254-202ENST00000633813 PRICKLE2Q7Z3G6 844 aa9.6□□□□□ -0.87
LINC00254-202ENST00000633813 GRIP2Q9C0E4 1043 aa9.6□□□□□ -0.87
LINC00254-202ENST00000633813 NXF1Q9UBU9 619 aaKnown RBP9.6□□□□□ -0.87
LINC00254-202ENST00000633813 TIMELESSQ9UNS1 1208 aa9.6□□□□□ -0.87
LINC00254-202ENST00000633813 CLDN10P78369 228 aa9.59□□□□□ -0.87
LINC00254-202ENST00000633813 CCDC102BQ68D86 513 aa9.59□□□□□ -0.87
LINC00254-202ENST00000633813 TMEM214Q6NUQ4 689 aaKnown RBP9.59□□□□□ -0.87
LINC00254-202ENST00000633813 NPAS3Q8IXF0 933 aa9.59□□□□□ -0.87
LINC00254-202ENST00000633813 TPCN2Q8NHX9 752 aa9.59□□□□□ -0.87
LINC00254-202ENST00000633813 HRH3Q9Y5N1 445 aa9.59□□□□□ -0.87
LINC00254-202ENST00000633813 PEG3Q9GZU2 1588 aa9.58□□□□□ -0.88
LINC00254-202ENST00000633813 WIZO95785 1651 aa9.58□□□□□ -0.88
LINC00254-202ENST00000633813 TMEM229AB2RXF0 380 aa9.58□□□□□ -0.88
LINC00254-202ENST00000633813 STAU1O95793 577 aaKnown RBP9.58□□□□□ -0.88
LINC00254-202ENST00000633813 PTSQ03393 145 aa9.58□□□□□ -0.88
LINC00254-202ENST00000633813 GNASQ5JWF2 1037 aa9.58□□□□□ -0.88
LINC00254-202ENST00000633813 SPATA31C2B4DYI2 1134 aa9.57□□□□□ -0.88
LINC00254-202ENST00000633813 RFX1P22670 979 aa9.57□□□□□ -0.88
LINC00254-202ENST00000633813 SMTNP53814 917 aa9.57□□□□□ -0.88
LINC00254-202ENST00000633813 KANK4Q5T7N3 995 aaPredicted RBP9.57□□□□□ -0.88
LINC00254-202ENST00000633813 TAS1R3Q7RTX0 852 aa9.57□□□□□ -0.88
LINC00254-202ENST00000633813 SIX5Q8N196 739 aa9.57□□□□□ -0.88
LINC00254-202ENST00000633813 SLC16A10Q8TF71 515 aa9.57□□□□□ -0.88
LINC00254-202ENST00000633813 ZNF594Q96JF6 807 aaPredicted RBP9.57□□□□□ -0.88
LINC00254-202ENST00000633813 FHDC1Q9C0D6 1143 aaPredicted RBP9.57□□□□□ -0.88
LINC00254-202ENST00000633813 SERTAD1Q9UHV2 236 aa9.57□□□□□ -0.88
LINC00254-202ENST00000633813 ATAD2BQ9ULI0 1458 aa9.57□□□□□ -0.88
LINC00254-202ENST00000633813 SMARCA2P51531 1590 aa9.56□□□□□ -0.88
LINC00254-202ENST00000633813 FAM196BA6NMK8 535 aa9.56□□□□□ -0.88
LINC00254-202ENST00000633813 ZBTB7BO15156 539 aaPredicted RBP9.56□□□□□ -0.88
LINC00254-202ENST00000633813 WDR44Q5JSH3 913 aa9.56□□□□□ -0.88
LINC00254-202ENST00000633813 NBPF15Q8N660 670 aa9.56□□□□□ -0.88
LINC00254-202ENST00000633813 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.56□□□□□ -0.88
LINC00254-202ENST00000633813 ZNF775Q96BV0 537 aaPredicted RBP9.56□□□□□ -0.88
LINC00254-202ENST00000633813 SLC4A9Q96Q91 983 aa9.56□□□□□ -0.88
LINC00254-202ENST00000633813 ZNF358Q9NW07 568 aa9.56□□□□□ -0.88
LINC00254-202ENST00000633813 KIAA1024Q9UPX6 916 aa9.56□□□□□ -0.88
LINC00254-202ENST00000633813 TERTO14746 1132 aaKnown RBP9.55□□□□□ -0.88
LINC00254-202ENST00000633813 POU4F2Q12837 409 aa9.55□□□□□ -0.88
LINC00254-202ENST00000633813 NBPF10Q6P3W6 841 aaKnown RBP9.55□□□□□ -0.88
LINC00254-202ENST00000633813 CCDC82Q8N4S0 544 aa9.55□□□□□ -0.88
LINC00254-202ENST00000633813 RHBDD1Q8TEB9 315 aa9.55□□□□□ -0.88
LINC00254-202ENST00000633813 A6NJY4 79 aa9.54□□□□□ -0.88
LINC00254-202ENST00000633813 USP17L15C9J2P7 530 aa9.54□□□□□ -0.88
LINC00254-202ENST00000633813 USP17L10C9JJH3 530 aa9.54□□□□□ -0.88
LINC00254-202ENST00000633813 USP17L13C9JLJ4 530 aa9.54□□□□□ -0.88
LINC00254-202ENST00000633813 USP17L12C9JPN9 530 aa9.54□□□□□ -0.88
LINC00254-202ENST00000633813 USP17L11C9JVI0 530 aa9.54□□□□□ -0.88
LINC00254-202ENST00000633813 USP17L21D6R901 530 aa9.54□□□□□ -0.88
LINC00254-202ENST00000633813 USP17L18D6R9N7 530 aa9.54□□□□□ -0.88
LINC00254-202ENST00000633813 USP17L22D6RA61 530 aa9.54□□□□□ -0.88
LINC00254-202ENST00000633813 USP17L17D6RBQ6 530 aa9.54□□□□□ -0.88
LINC00254-202ENST00000633813 USP17L19D6RCP7 530 aa9.54□□□□□ -0.88
LINC00254-202ENST00000633813 USP17L20D6RJB6 530 aa9.54□□□□□ -0.88
LINC00254-202ENST00000633813 RHOQP17081 205 aa9.54□□□□□ -0.88
LINC00254-202ENST00000633813 USP17L24Q0WX57 530 aa9.54□□□□□ -0.88
LINC00254-202ENST00000633813 PPARGC1BQ86YN6 1023 aaKnown RBP9.54□□□□□ -0.88
LINC00254-202ENST00000633813 NCAPD3P42695 1498 aa9.53□□□□□ -0.88
LINC00254-202ENST00000633813 SLC35F4A4IF30 521 aa9.53□□□□□ -0.88
LINC00254-202ENST00000633813 M0R2N6 131 aa9.53□□□□□ -0.88
LINC00254-202ENST00000633813 SEC13P55735 322 aa9.53□□□□□ -0.88
LINC00254-202ENST00000633813 PTK7Q13308 1070 aa9.53□□□□□ -0.88
LINC00254-202ENST00000633813 MTFR1Q15390 333 aa9.53□□□□□ -0.88
LINC00254-202ENST00000633813 CRTC2Q53ET0 693 aaPredicted RBP9.53□□□□□ -0.88
LINC00254-202ENST00000633813 CCDC155Q8N6L0 562 aa9.53□□□□□ -0.88
LINC00254-202ENST00000633813 CDK2AP1O14519 115 aa9.52□□□□□ -0.89
LINC00254-202ENST00000633813 PPFIA3O75145 1194 aa9.52□□□□□ -0.89
LINC00254-202ENST00000633813 TIMMDC1Q9NPL8 285 aa9.52□□□□□ -0.89
LINC00254-202ENST00000633813 DYRK1BQ9Y463 629 aa9.52□□□□□ -0.89
LINC00254-202ENST00000633813 TOP2AP11388 1531 aaKnown RBP9.51□□□□□ -0.89
LINC00254-202ENST00000633813 ANKMY2Q8IV38 441 aa9.51□□□□□ -0.89
LINC00254-202ENST00000633813 NIFKQ9BYG3 293 aaKnown RBP9.51□□□□□ -0.89
LINC00254-202ENST00000633813 SENP3-EIF4A1A0A087X0R7 540 aa9.5□□□□□ -0.89
LINC00254-202ENST00000633813 H3BM21 787 aa9.5□□□□□ -0.89
LINC00254-202ENST00000633813 WFS1O76024 890 aa9.5□□□□□ -0.89
LINC00254-202ENST00000633813 C4orf17Q53FE4 359 aa9.5□□□□□ -0.89
LINC00254-202ENST00000633813 CDCA8Q53HL2 280 aa9.5□□□□□ -0.89
LINC00254-202ENST00000633813 PBXIP1Q96AQ6 731 aa9.5□□□□□ -0.89
LINC00254-202ENST00000633813 C1orf115Q9H7X2 142 aa9.5□□□□□ -0.89
LINC00254-202ENST00000633813 BAZ1BQ9UIG0 1483 aaKnown RBP9.5□□□□□ -0.89
LINC00254-202ENST00000633813 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.49□□□□□ -0.89
LINC00254-202ENST00000633813 A0A1B0GTH6 734 aa9.49□□□□□ -0.89
LINC00254-202ENST00000633813 SFI1A8K8P3 1242 aa9.49□□□□□ -0.89
LINC00254-202ENST00000633813 ITGA6P23229 1130 aa9.49□□□□□ -0.89
LINC00254-202ENST00000633813 PHKA2P46019 1235 aa9.49□□□□□ -0.89
LINC00254-202ENST00000633813 VEGFBP49765 207 aa9.49□□□□□ -0.89
LINC00254-202ENST00000633813 DPYDQ12882 1025 aa9.49□□□□□ -0.89
LINC00254-202ENST00000633813 NFX1Q12986 1120 aaKnown RBP9.49□□□□□ -0.89
LINC00254-202ENST00000633813 IRF7Q92985 503 aa9.49□□□□□ -0.89
LINC00254-202ENST00000633813 SCHIP1Q9P0W5 487 aaPredicted RBP9.49□□□□□ -0.89
LINC00254-202ENST00000633813 DKK1O94907 266 aa9.48□□□□□ -0.89
LINC00254-202ENST00000633813 TREML4Q6UXN2 200 aa9.48□□□□□ -0.89
LINC00254-202ENST00000633813 TNS4Q8IZW8 715 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms