RNA–Protein interactions for RNA: ENST00000632897.1

LIMS4-204, Transcript of LIM zinc finger domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS4, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-204ENST00000632897 TAF7Q15545 349 aaPredicted RBP18.08■□□□□ 0.49
LIMS4-204ENST00000632897 PTPRCP08575 1304 aa18.07■□□□□ 0.48
LIMS4-204ENST00000632897 ZNF530Q6P9A1 599 aaPredicted RBP18.07■□□□□ 0.48
LIMS4-204ENST00000632897 ZBTB40Q9NUA8 1239 aa18.07■□□□□ 0.48
LIMS4-204ENST00000632897 BCL9LQ86UU0 1499 aa18.06■□□□□ 0.48
LIMS4-204ENST00000632897 KRT24Q2M2I5 525 aa18.06■□□□□ 0.48
LIMS4-204ENST00000632897 MIS18AQ9NYP9 233 aa18.06■□□□□ 0.48
LIMS4-204ENST00000632897 NWD2Q9ULI1 1742 aa18.06■□□□□ 0.48
LIMS4-204ENST00000632897 HDAC1Q13547 482 aaPredicted RBP18.05■□□□□ 0.48
LIMS4-204ENST00000632897 C1orf141Q5JVX7 400 aa18.05■□□□□ 0.48
LIMS4-204ENST00000632897 UNC5CLQ8IV45 518 aa18.04■□□□□ 0.48
LIMS4-204ENST00000632897 GJD4Q96KN9 370 aaPredicted RBP18.04■□□□□ 0.48
LIMS4-204ENST00000632897 SLIT2O94813 1529 aa18.04■□□□□ 0.48
LIMS4-204ENST00000632897 ABCA3Q99758 1704 aa18.04■□□□□ 0.48
LIMS4-204ENST00000632897 CABLES1Q8TDN4 633 aa18.03■□□□□ 0.48
LIMS4-204ENST00000632897 KDM3BQ7LBC6 1761 aa18.03■□□□□ 0.48
LIMS4-204ENST00000632897 ADAMTS7Q9UKP4 1686 aa18.03■□□□□ 0.48
LIMS4-204ENST00000632897 CHMP4AQ9BY43 222 aa18.02■□□□□ 0.48
LIMS4-204ENST00000632897 PLCH1Q4KWH8 1693 aa18.02■□□□□ 0.47
LIMS4-204ENST00000632897 INTS3Q68E01 1043 aaKnown RBP18.01■□□□□ 0.47
LIMS4-204ENST00000632897 RAPGEF4Q8WZA2 1011 aa18.01■□□□□ 0.47
LIMS4-204ENST00000632897 NLRP2Q9NX02 1062 aa18.01■□□□□ 0.47
LIMS4-204ENST00000632897 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.01■□□□□ 0.47
LIMS4-204ENST00000632897 ZBTB7BO15156 539 aaPredicted RBP18.01■□□□□ 0.47
LIMS4-204ENST00000632897 HOXB7P09629 217 aa18.01■□□□□ 0.47
LIMS4-204ENST00000632897 PDE4AP27815 886 aa18.01■□□□□ 0.47
LIMS4-204ENST00000632897 CCDC30Q5VVM6 783 aa18.01■□□□□ 0.47
LIMS4-204ENST00000632897 CCDC125Q86Z20 511 aa18.01■□□□□ 0.47
LIMS4-204ENST00000632897 STK31Q9BXU1 1019 aa18.01■□□□□ 0.47
LIMS4-204ENST00000632897 BACH2Q9BYV9 841 aa18.01■□□□□ 0.47
LIMS4-204ENST00000632897 RNMTO43148 476 aaKnown RBP18■□□□□ 0.47
LIMS4-204ENST00000632897 CSB-PGBD3P0DP91 1061 aa18■□□□□ 0.47
LIMS4-204ENST00000632897 TATP17735 454 aaPredicted RBP18■□□□□ 0.47
LIMS4-204ENST00000632897 TEFQ10587 303 aa18■□□□□ 0.47
LIMS4-204ENST00000632897 CACNA1FO60840 1977 aa17.99■□□□□ 0.47
LIMS4-204ENST00000632897 SLC4A2P04920 1241 aa17.99■□□□□ 0.47
LIMS4-204ENST00000632897 LGR6Q9HBX8 967 aa17.99■□□□□ 0.47
LIMS4-204ENST00000632897 SPG7Q9UQ90 795 aa17.99■□□□□ 0.47
LIMS4-204ENST00000632897 VIRMAQ69YN4 1812 aaKnown RBP17.98■□□□□ 0.47
LIMS4-204ENST00000632897 CHRNA2Q15822 529 aa17.98■□□□□ 0.47
LIMS4-204ENST00000632897 SKAP1Q86WV1 359 aa17.98■□□□□ 0.47
LIMS4-204ENST00000632897 PKD1L3Q7Z443 1732 aa17.97■□□□□ 0.47
LIMS4-204ENST00000632897 SIPA1L3O60292 1781 aaPredicted RBP17.97■□□□□ 0.47
LIMS4-204ENST00000632897 MEGF6O75095 1541 aa17.97■□□□□ 0.47
LIMS4-204ENST00000632897 GLI3P10071 1580 aa17.96■□□□□ 0.47
LIMS4-204ENST00000632897 EIF4A1P60842 406 aaKnown RBP17.96■□□□□ 0.47
LIMS4-204ENST00000632897 VPS72Q15906 364 aa17.96■□□□□ 0.47
LIMS4-204ENST00000632897 MPRIPQ6WCQ1 1025 aa17.96■□□□□ 0.47
LIMS4-204ENST00000632897 PRDM11Q9NQV5 511 aa17.96■□□□□ 0.47
LIMS4-204ENST00000632897 BTBD11A6QL63 1104 aa17.95■□□□□ 0.46
LIMS4-204ENST00000632897 RGS3P49796 1198 aa17.95■□□□□ 0.46
LIMS4-204ENST00000632897 SMC5Q8IY18 1101 aa17.95■□□□□ 0.46
LIMS4-204ENST00000632897 PDZRN3Q9UPQ7 1066 aa17.95■□□□□ 0.46
LIMS4-204ENST00000632897 COL14A1Q05707 1796 aaKnown RBP17.95■□□□□ 0.46
LIMS4-204ENST00000632897 FAM161AQ3B820 660 aa17.95■□□□□ 0.46
LIMS4-204ENST00000632897 CCDC9Q9Y3X0 531 aaKnown RBP17.95■□□□□ 0.46
LIMS4-204ENST00000632897 WDR17Q8IZU2 1322 aa17.94■□□□□ 0.46
LIMS4-204ENST00000632897 PARP4Q9UKK3 1724 aaKnown RBP17.94■□□□□ 0.46
LIMS4-204ENST00000632897 COL5A2P05997 1499 aaPredicted RBP17.94■□□□□ 0.46
LIMS4-204ENST00000632897 SCN11AQ9UI33 1791 aa17.94■□□□□ 0.46
LIMS4-204ENST00000632897 PHKG2P15735 406 aa17.93■□□□□ 0.46
LIMS4-204ENST00000632897 CCT4P50991 539 aaKnown RBP17.93■□□□□ 0.46
LIMS4-204ENST00000632897 PXDNLA1KZ92 1463 aa17.93■□□□□ 0.46
LIMS4-204ENST00000632897 N4BP2Q86UW6 1770 aaPredicted RBP17.92■□□□□ 0.46
LIMS4-204ENST00000632897 HSP90AB1P08238 724 aaKnown RBP17.92■□□□□ 0.46
LIMS4-204ENST00000632897 HDGFL1Q5TGJ6 251 aa17.92■□□□□ 0.46
LIMS4-204ENST00000632897 IFNL2Q8IZJ0 200 aa17.92■□□□□ 0.46
LIMS4-204ENST00000632897 MRC1P22897 1456 aa17.92■□□□□ 0.46
LIMS4-204ENST00000632897 FLIIQ13045 1269 aa17.91■□□□□ 0.46
LIMS4-204ENST00000632897 G2E3Q7L622 706 aa17.91■□□□□ 0.46
LIMS4-204ENST00000632897 GCC1Q96CN9 775 aa17.91■□□□□ 0.46
LIMS4-204ENST00000632897 NRAPQ86VF7 1730 aa17.91■□□□□ 0.46
LIMS4-204ENST00000632897 BRWD3Q6RI45 1802 aa17.91■□□□□ 0.46
LIMS4-204ENST00000632897 KDM6AO15550 1401 aaPredicted RBP17.9■□□□□ 0.46
LIMS4-204ENST00000632897 SF3B2Q13435 895 aaKnown RBP17.9■□□□□ 0.46
LIMS4-204ENST00000632897 HEG1Q9ULI3 1381 aa17.9■□□□□ 0.46
LIMS4-204ENST00000632897 ANP32AP39687 249 aaKnown RBP17.88■□□□□ 0.45
LIMS4-204ENST00000632897 C8orf34Q49A92 452 aa17.88■□□□□ 0.45
LIMS4-204ENST00000632897 SEPT12Q8IYM1 358 aa17.88■□□□□ 0.45
LIMS4-204ENST00000632897 DCAF5Q96JK2 942 aa17.88■□□□□ 0.45
LIMS4-204ENST00000632897 CARD10Q9BWT7 1032 aa17.88■□□□□ 0.45
LIMS4-204ENST00000632897 SLC52A2Q9HAB3 445 aa17.88■□□□□ 0.45
LIMS4-204ENST00000632897 A0A0G2JS52 829 aa17.88■□□□□ 0.45
LIMS4-204ENST00000632897 MYT1Q01538 1121 aa17.88■□□□□ 0.45
LIMS4-204ENST00000632897 NUCB1Q02818 461 aa17.88■□□□□ 0.45
LIMS4-204ENST00000632897 FKBP5Q13451 457 aaPredicted RBP17.88■□□□□ 0.45
LIMS4-204ENST00000632897 TOM1L2Q6ZVM7 507 aa17.88■□□□□ 0.45
LIMS4-204ENST00000632897 KCNQ3O43525 872 aa17.87■□□□□ 0.45
LIMS4-204ENST00000632897 RPAP2Q8IXW5 612 aaPredicted RBP17.87■□□□□ 0.45
LIMS4-204ENST00000632897 C1orf115Q9H7X2 142 aa17.87■□□□□ 0.45
LIMS4-204ENST00000632897 BTG4Q9NY30 223 aa17.87■□□□□ 0.45
LIMS4-204ENST00000632897 ATP10DQ9P241 1426 aa17.87■□□□□ 0.45
LIMS4-204ENST00000632897 ONECUT3O60422 494 aaPredicted RBP17.86■□□□□ 0.45
LIMS4-204ENST00000632897 GIGYF1O75420 1035 aaPredicted RBP17.86■□□□□ 0.45
LIMS4-204ENST00000632897 ANKRD44Q8N8A2 993 aa17.86■□□□□ 0.45
LIMS4-204ENST00000632897 PCDH11XQ9BZA7 1347 aa17.85■□□□□ 0.45
LIMS4-204ENST00000632897 PCDH11YQ9BZA8 1340 aa17.85■□□□□ 0.45
LIMS4-204ENST00000632897 CYP27B1O15528 508 aa17.85■□□□□ 0.45
LIMS4-204ENST00000632897 SLC4A10Q6U841 1118 aa17.85■□□□□ 0.45
LIMS4-204ENST00000632897 KRT27Q7Z3Y8 459 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms