RNA–Protein interactions for RNA: ENST00000630868.1

CDRT1-208, CMT1A duplicated region transcript 1, humanhuman

BASIC

Gene CDRT1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-208ENST00000630868 TSNAXIP1Q2TAA8 658 aa7□□□□□ -1.29
CDRT1-208ENST00000630868 CCDC102BQ68D86 513 aa7□□□□□ -1.29
CDRT1-208ENST00000630868 ARMC2Q8NEN0 867 aa7□□□□□ -1.29
CDRT1-208ENST00000630868 LRCH3Q96II8 777 aa7□□□□□ -1.29
CDRT1-208ENST00000630868 NUDT12Q9BQG2 462 aa7□□□□□ -1.29
CDRT1-208ENST00000630868 SCUBE2Q9NQ36 999 aa7□□□□□ -1.29
CDRT1-208ENST00000630868 PRDM9Q9NQV7 894 aa7□□□□□ -1.29
CDRT1-208ENST00000630868 EVA1BQ9NVM1 165 aa7□□□□□ -1.29
CDRT1-208ENST00000630868 FKBP5Q13451 457 aaPredicted RBP6.99□□□□□ -1.29
CDRT1-208ENST00000630868 SH3BP5LQ7L8J4 393 aa6.99□□□□□ -1.29
CDRT1-208ENST00000630868 SP7Q8TDD2 431 aaPredicted RBP6.99□□□□□ -1.29
CDRT1-208ENST00000630868 PRR14Q9BWN1 585 aa6.99□□□□□ -1.29
CDRT1-208ENST00000630868 PCDHGA11Q9Y5H2 935 aa6.99□□□□□ -1.29
CDRT1-208ENST00000630868 PCF11O94913 1555 aaKnown RBP6.99□□□□□ -1.29
CDRT1-208ENST00000630868 NEO1Q92859 1461 aa6.98□□□□□ -1.29
CDRT1-208ENST00000630868 ABCA9Q8IUA7 1624 aa6.98□□□□□ -1.29
CDRT1-208ENST00000630868 CTTNBP2Q8WZ74 1663 aa6.98□□□□□ -1.29
CDRT1-208ENST00000630868 GIGYF1O75420 1035 aaPredicted RBP6.98□□□□□ -1.29
CDRT1-208ENST00000630868 MSS51Q4VC12 460 aa6.98□□□□□ -1.29
CDRT1-208ENST00000630868 NAALADL2Q58DX5 795 aa6.98□□□□□ -1.29
CDRT1-208ENST00000630868 VARS2Q5ST30 1063 aaKnown RBP6.98□□□□□ -1.29
CDRT1-208ENST00000630868 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.98□□□□□ -1.29
CDRT1-208ENST00000630868 ATP10BO94823 1461 aa6.98□□□□□ -1.29
CDRT1-208ENST00000630868 PRXQ9BXM0 1461 aa6.98□□□□□ -1.29
CDRT1-208ENST00000630868 P4HBP07237 508 aaKnown RBP6.97□□□□□ -1.29
CDRT1-208ENST00000630868 WEE1P30291 646 aa6.97□□□□□ -1.29
CDRT1-208ENST00000630868 PSME1Q06323 249 aa6.97□□□□□ -1.29
CDRT1-208ENST00000630868 BCORL1Q5H9F3 1711 aa6.97□□□□□ -1.29
CDRT1-208ENST00000630868 ZBTB33Q86T24 672 aa6.97□□□□□ -1.29
CDRT1-208ENST00000630868 DZIP3Q86Y13 1208 aaKnown RBP6.97□□□□□ -1.29
CDRT1-208ENST00000630868 RGL4Q8IZJ4 473 aa6.97□□□□□ -1.29
CDRT1-208ENST00000630868 FAM160A2Q8N612 972 aaPredicted RBP6.97□□□□□ -1.29
CDRT1-208ENST00000630868 GAS2L2Q8NHY3 880 aa6.97□□□□□ -1.29
CDRT1-208ENST00000630868 CARD14Q9BXL6 1004 aa6.97□□□□□ -1.29
CDRT1-208ENST00000630868 PCDHB3Q9Y5E6 796 aa6.97□□□□□ -1.29
CDRT1-208ENST00000630868 FRMPD1Q5SYB0 1578 aa6.96□□□□□ -1.29
CDRT1-208ENST00000630868 SNPHO15079 494 aa6.96□□□□□ -1.3
CDRT1-208ENST00000630868 NR1I2O75469 434 aa6.96□□□□□ -1.3
CDRT1-208ENST00000630868 MMP16P51512 607 aa6.96□□□□□ -1.3
CDRT1-208ENST00000630868 FKBP4Q02790 459 aaKnown RBP eCLIP6.96□□□□□ -1.3
CDRT1-208ENST00000630868 SF3B2Q13435 895 aaKnown RBP6.96□□□□□ -1.3
CDRT1-208ENST00000630868 MRPL58Q14197 206 aaKnown RBP6.96□□□□□ -1.3
CDRT1-208ENST00000630868 ZSCAN29Q8IWY8 852 aaPredicted RBP6.96□□□□□ -1.3
CDRT1-208ENST00000630868 TSEN2Q8NCE0 465 aaKnown RBP6.96□□□□□ -1.3
CDRT1-208ENST00000630868 RBM19Q9Y4C8 960 aaKnown RBP6.96□□□□□ -1.3
CDRT1-208ENST00000630868 MADDQ8WXG6 1647 aa6.95□□□□□ -1.3
CDRT1-208ENST00000630868 MAGEB6P1A0A0J9YX57 407 aa6.95□□□□□ -1.3
CDRT1-208ENST00000630868 RAPGEF3O95398 923 aa6.95□□□□□ -1.3
CDRT1-208ENST00000630868 HDLBPQ00341 1268 aaKnown RBP6.95□□□□□ -1.3
CDRT1-208ENST00000630868 COL19A1Q14993 1142 aa6.95□□□□□ -1.3
CDRT1-208ENST00000630868 EAPPQ56P03 285 aaPredicted RBP6.95□□□□□ -1.3
CDRT1-208ENST00000630868 SH3RF1Q7Z6J0 888 aa6.95□□□□□ -1.3
CDRT1-208ENST00000630868 HINFPQ9BQA5 517 aa6.95□□□□□ -1.3
CDRT1-208ENST00000630868 BACH2Q9BYV9 841 aa6.95□□□□□ -1.3
CDRT1-208ENST00000630868 ERCC5P28715 1186 aaPredicted RBP6.94□□□□□ -1.3
CDRT1-208ENST00000630868 PBX2P40425 430 aa6.94□□□□□ -1.3
CDRT1-208ENST00000630868 LDLRAD1Q5T700 205 aa6.94□□□□□ -1.3
CDRT1-208ENST00000630868 MRPL50Q8N5N7 158 aaKnown RBP6.94□□□□□ -1.3
CDRT1-208ENST00000630868 UBXN4Q92575 508 aa6.94□□□□□ -1.3
CDRT1-208ENST00000630868 UNC93B1Q9H1C4 597 aa6.94□□□□□ -1.3
CDRT1-208ENST00000630868 ARHGEF40Q8TER5 1519 aa6.94□□□□□ -1.3
CDRT1-208ENST00000630868 ERBB3P21860 1342 aa6.94□□□□□ -1.3
CDRT1-208ENST00000630868 FHOD3Q2V2M9 1422 aa6.93□□□□□ -1.3
CDRT1-208ENST00000630868 SMARCA5O60264 1052 aaPredicted RBP6.93□□□□□ -1.3
CDRT1-208ENST00000630868 ERFEQ4G0M1 354 aa6.93□□□□□ -1.3
CDRT1-208ENST00000630868 PTCRAQ6ISU1 281 aaPredicted RBP6.93□□□□□ -1.3
CDRT1-208ENST00000630868 MAMSTRQ6ZN01 415 aa6.93□□□□□ -1.3
CDRT1-208ENST00000630868 TMC7Q7Z402 723 aa6.93□□□□□ -1.3
CDRT1-208ENST00000630868 HELQQ8TDG4 1101 aa6.93□□□□□ -1.3
CDRT1-208ENST00000630868 PPP1R1BQ9UD71 204 aaPredicted RBP6.93□□□□□ -1.3
CDRT1-208ENST00000630868 HPS5Q9UPZ3 1129 aa6.93□□□□□ -1.3
CDRT1-208ENST00000630868 SPATA31D1Q6ZQQ2 1576 aa6.93□□□□□ -1.3
CDRT1-208ENST00000630868 BCAMP50895 628 aa6.92□□□□□ -1.3
CDRT1-208ENST00000630868 NAA30Q147X3 362 aaPredicted RBP6.92□□□□□ -1.3
CDRT1-208ENST00000630868 SF3A1Q15459 793 aaKnown RBP6.92□□□□□ -1.3
CDRT1-208ENST00000630868 C9orf131Q5VYM1 1079 aa6.92□□□□□ -1.3
CDRT1-208ENST00000630868 SPSB2Q99619 263 aa6.92□□□□□ -1.3
CDRT1-208ENST00000630868 PCDHB11Q9Y5F2 797 aa6.92□□□□□ -1.3
CDRT1-208ENST00000630868 ZMYM4Q5VZL5 1548 aa6.91□□□□□ -1.3
CDRT1-208ENST00000630868 SAMD9Q5K651 1589 aa6.91□□□□□ -1.3
CDRT1-208ENST00000630868 RICTORQ6R327 1708 aa6.91□□□□□ -1.3
CDRT1-208ENST00000630868 TLL1O43897 1013 aa6.91□□□□□ -1.3
CDRT1-208ENST00000630868 PTCD1O75127 700 aaKnown RBP6.91□□□□□ -1.3
CDRT1-208ENST00000630868 PPP4CP60510 307 aa6.91□□□□□ -1.3
CDRT1-208ENST00000630868 FMR1Q06787 632 aaKnown RBP eCLIP6.91□□□□□ -1.3
CDRT1-208ENST00000630868 RAD51AP2Q09MP3 1159 aa6.91□□□□□ -1.3
CDRT1-208ENST00000630868 C4orf48Q5BLP8 95 aa6.91□□□□□ -1.3
CDRT1-208ENST00000630868 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.91□□□□□ -1.3
CDRT1-208ENST00000630868 SPATA32Q96LK8 384 aa6.91□□□□□ -1.3
CDRT1-208ENST00000630868 RBCK1Q9BYM8 510 aa6.91□□□□□ -1.3
CDRT1-208ENST00000630868 DENND4BO75064 1496 aaPredicted RBP6.91□□□□□ -1.3
CDRT1-208ENST00000630868 NUP153P49790 1475 aaKnown RBP6.91□□□□□ -1.3
CDRT1-208ENST00000630868 RIMS1Q86UR5 1692 aaKnown RBP6.9□□□□□ -1.3
CDRT1-208ENST00000630868 ESPNB1AK53 854 aa6.9□□□□□ -1.3
CDRT1-208ENST00000630868 M0R2N6 131 aa6.9□□□□□ -1.3
CDRT1-208ENST00000630868 SCAMP3O14828 347 aaKnown RBP6.9□□□□□ -1.3
CDRT1-208ENST00000630868 NPR3P17342 541 aa6.9□□□□□ -1.3
CDRT1-208ENST00000630868 MPSTP25325 297 aa6.9□□□□□ -1.3
CDRT1-208ENST00000630868 FOXJ1Q92949 421 aa6.9□□□□□ -1.3
CDRT1-208ENST00000630868 COL26A1Q96A83 441 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms