RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 TOM1O60784 492 aa12.95□□□□□ -0.34
SOX2-OT-244ENST00000627738 MKRN3Q13064 507 aaKnown RBP12.95□□□□□ -0.34
SOX2-OT-244ENST00000627738 CDAN1Q8IWY9 1227 aa12.95□□□□□ -0.34
SOX2-OT-244ENST00000627738 LRRC59Q96AG4 307 aaKnown RBP12.95□□□□□ -0.34
SOX2-OT-244ENST00000627738 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.95□□□□□ -0.34
SOX2-OT-244ENST00000627738 RCAN3Q9UKA8 241 aa12.95□□□□□ -0.34
SOX2-OT-244ENST00000627738 CPDO75976 1380 aa12.94□□□□□ -0.34
SOX2-OT-244ENST00000627738 KIAA0232Q92628 1395 aa12.94□□□□□ -0.34
SOX2-OT-244ENST00000627738 LMOD3Q0VAK6 560 aa12.94□□□□□ -0.34
SOX2-OT-244ENST00000627738 CHRNA2Q15822 529 aa12.94□□□□□ -0.34
SOX2-OT-244ENST00000627738 MFRPQ9BY79 579 aa12.94□□□□□ -0.34
SOX2-OT-244ENST00000627738 COL18A1P39060 1754 aa12.94□□□□□ -0.34
SOX2-OT-244ENST00000627738 RGPD5Q99666 1765 aa12.94□□□□□ -0.34
SOX2-OT-244ENST00000627738 PIP4K2BP78356 416 aa12.93□□□□□ -0.34
SOX2-OT-244ENST00000627738 MTHFSDQ2M296 383 aaKnown RBP12.93□□□□□ -0.34
SOX2-OT-244ENST00000627738 MYH16Q9H6N6 1097 aa12.93□□□□□ -0.34
SOX2-OT-244ENST00000627738 RGPD2P0DJD1 1756 aa12.93□□□□□ -0.34
SOX2-OT-244ENST00000627738 DLG5Q8TDM6 1919 aa12.93□□□□□ -0.34
SOX2-OT-244ENST00000627738 ERBB3P21860 1342 aa12.92□□□□□ -0.34
SOX2-OT-244ENST00000627738 IL16Q14005 1332 aa12.92□□□□□ -0.34
SOX2-OT-244ENST00000627738 RNF123Q5XPI4 1314 aa12.92□□□□□ -0.34
SOX2-OT-244ENST00000627738 IRX6P78412 446 aaPredicted RBP12.92□□□□□ -0.34
SOX2-OT-244ENST00000627738 ABCA3Q99758 1704 aa12.92□□□□□ -0.34
SOX2-OT-244ENST00000627738 THUMPD2Q9BTF0 503 aaKnown RBP12.92□□□□□ -0.34
SOX2-OT-244ENST00000627738 ABCC6O95255 1503 aa12.92□□□□□ -0.34
SOX2-OT-244ENST00000627738 FAM83GA6ND36 823 aa12.91□□□□□ -0.34
SOX2-OT-244ENST00000627738 UBAP1LF5GYI3 381 aa12.91□□□□□ -0.34
SOX2-OT-244ENST00000627738 GAS2L2Q8NHY3 880 aa12.91□□□□□ -0.34
SOX2-OT-244ENST00000627738 PRDM11Q9NQV5 511 aa12.91□□□□□ -0.34
SOX2-OT-244ENST00000627738 NCAPD2Q15021 1401 aa12.9□□□□□ -0.34
SOX2-OT-244ENST00000627738 CSB-PGBD3P0DP91 1061 aa12.9□□□□□ -0.34
SOX2-OT-244ENST00000627738 CALD1Q05682 793 aaKnown RBP12.9□□□□□ -0.34
SOX2-OT-244ENST00000627738 DCTN1Q14203 1278 aa12.9□□□□□ -0.34
SOX2-OT-244ENST00000627738 TSR2Q969E8 191 aaKnown RBP12.9□□□□□ -0.34
SOX2-OT-244ENST00000627738 PHLPP1O60346 1717 aa12.9□□□□□ -0.34
SOX2-OT-244ENST00000627738 CAMTA1Q9Y6Y1 1673 aa12.89□□□□□ -0.35
SOX2-OT-244ENST00000627738 FANCIQ9NVI1 1328 aa12.89□□□□□ -0.35
SOX2-OT-244ENST00000627738 RRP1P56182 461 aaKnown RBP12.89□□□□□ -0.35
SOX2-OT-244ENST00000627738 PDCD7Q8N8D1 485 aaKnown RBP12.89□□□□□ -0.35
SOX2-OT-244ENST00000627738 NLRP2Q9NX02 1062 aa12.89□□□□□ -0.35
SOX2-OT-244ENST00000627738 COL16A1Q07092 1604 aaPredicted RBP12.88□□□□□ -0.35
SOX2-OT-244ENST00000627738 C3orf67Q6ZVT6 689 aa12.88□□□□□ -0.35
SOX2-OT-244ENST00000627738 MCM10Q7L590 875 aa12.88□□□□□ -0.35
SOX2-OT-244ENST00000627738 CERKQ8TCT0 537 aa12.88□□□□□ -0.35
SOX2-OT-244ENST00000627738 IFT57Q9NWB7 429 aa12.88□□□□□ -0.35
SOX2-OT-244ENST00000627738 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.88□□□□□ -0.35
SOX2-OT-244ENST00000627738 LAS1LQ9Y4W2 734 aaKnown RBP12.88□□□□□ -0.35
SOX2-OT-244ENST00000627738 LMO7Q8WWI1 1683 aa12.88□□□□□ -0.35
SOX2-OT-244ENST00000627738 GNAI1P63096 354 aa12.87□□□□□ -0.35
SOX2-OT-244ENST00000627738 RTF1Q92541 710 aaKnown RBP12.87□□□□□ -0.35
SOX2-OT-244ENST00000627738 COL22A1Q8NFW1 1626 aaPredicted RBP12.87□□□□□ -0.35
SOX2-OT-244ENST00000627738 GNAT3A8MTJ3 354 aa12.86□□□□□ -0.35
SOX2-OT-244ENST00000627738 HTATSF1O43719 755 aaKnown RBP12.86□□□□□ -0.35
SOX2-OT-244ENST00000627738 ZNF853P0CG23 659 aa12.86□□□□□ -0.35
SOX2-OT-244ENST00000627738 EXOSC9Q06265 439 aaKnown RBP12.86□□□□□ -0.35
SOX2-OT-244ENST00000627738 PLEKHO1Q53GL0 409 aaPredicted RBP12.86□□□□□ -0.35
SOX2-OT-244ENST00000627738 FAM208AQ9UK61 1670 aaKnown RBP12.86□□□□□ -0.35
SOX2-OT-244ENST00000627738 MAP3K5Q99683 1374 aa12.85□□□□□ -0.35
SOX2-OT-244ENST00000627738 AMOTQ4VCS5 1084 aa12.85□□□□□ -0.35
SOX2-OT-244ENST00000627738 WDR17Q8IZU2 1322 aa12.85□□□□□ -0.35
SOX2-OT-244ENST00000627738 COL5A2P05997 1499 aaPredicted RBP12.85□□□□□ -0.35
SOX2-OT-244ENST00000627738 PLIN1O60240 522 aa12.84□□□□□ -0.35
SOX2-OT-244ENST00000627738 RAPGEF4Q8WZA2 1011 aa12.84□□□□□ -0.35
SOX2-OT-244ENST00000627738 MBIPQ9NS73 344 aa12.84□□□□□ -0.35
SOX2-OT-244ENST00000627738 CRB1P82279 1406 aa12.84□□□□□ -0.35
SOX2-OT-244ENST00000627738 SNPHO15079 494 aa12.83□□□□□ -0.36
SOX2-OT-244ENST00000627738 BCAR3O75815 825 aa12.83□□□□□ -0.36
SOX2-OT-244ENST00000627738 CT47B1P0C2W7 299 aaPredicted RBP12.83□□□□□ -0.36
SOX2-OT-244ENST00000627738 TATP17735 454 aaPredicted RBP12.83□□□□□ -0.36
SOX2-OT-244ENST00000627738 EVA1CP58658 441 aa12.83□□□□□ -0.36
SOX2-OT-244ENST00000627738 ERICH6BQ5W0A0 696 aa12.83□□□□□ -0.36
SOX2-OT-244ENST00000627738 ZNF530Q6P9A1 599 aaPredicted RBP12.83□□□□□ -0.36
SOX2-OT-244ENST00000627738 TOM1L2Q6ZVM7 507 aa12.83□□□□□ -0.36
SOX2-OT-244ENST00000627738 FBXO22Q8NEZ5 403 aa12.83□□□□□ -0.36
SOX2-OT-244ENST00000627738 MARVELD3Q96A59 401 aa12.83□□□□□ -0.36
SOX2-OT-244ENST00000627738 STRN4Q9NRL3 753 aa12.83□□□□□ -0.36
SOX2-OT-244ENST00000627738 CHL1O00533 1208 aa12.82□□□□□ -0.36
SOX2-OT-244ENST00000627738 RARSP54136 660 aaKnown RBP12.82□□□□□ -0.36
SOX2-OT-244ENST00000627738 AKAP4Q5JQC9 854 aa12.82□□□□□ -0.36
SOX2-OT-244ENST00000627738 IL17REQ8NFR9 667 aa12.82□□□□□ -0.36
SOX2-OT-244ENST00000627738 L3MBTL3Q96JM7 780 aaPredicted RBP12.82□□□□□ -0.36
SOX2-OT-244ENST00000627738 BTG4Q9NY30 223 aa12.82□□□□□ -0.36
SOX2-OT-244ENST00000627738 MEGF6O75095 1541 aa12.82□□□□□ -0.36
SOX2-OT-244ENST00000627738 PPP1R37O75864 691 aa12.81□□□□□ -0.36
SOX2-OT-244ENST00000627738 C1orf141Q5JVX7 400 aa12.81□□□□□ -0.36
SOX2-OT-244ENST00000627738 LARP1Q6PKG0 1096 aaKnown RBP12.81□□□□□ -0.36
SOX2-OT-244ENST00000627738 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.81□□□□□ -0.36
SOX2-OT-244ENST00000627738 COL14A1Q05707 1796 aaKnown RBP12.81□□□□□ -0.36
SOX2-OT-244ENST00000627738 NUTM2BA6NNL0 878 aaPredicted RBP12.8□□□□□ -0.36
SOX2-OT-244ENST00000627738 NUTM2EB1AL46 878 aaPredicted RBP12.8□□□□□ -0.36
SOX2-OT-244ENST00000627738 ADAMTS2O95450 1211 aa12.8□□□□□ -0.36
SOX2-OT-244ENST00000627738 NUTM2AQ8IVF1 878 aaPredicted RBP12.8□□□□□ -0.36
SOX2-OT-244ENST00000627738 CARD10Q9BWT7 1032 aa12.8□□□□□ -0.36
SOX2-OT-244ENST00000627738 MIS18AQ9NYP9 233 aa12.8□□□□□ -0.36
SOX2-OT-244ENST00000627738 LRRC37A3O60309 1634 aa12.8□□□□□ -0.36
SOX2-OT-244ENST00000627738 MPRIPQ6WCQ1 1025 aa12.79□□□□□ -0.36
SOX2-OT-244ENST00000627738 BCL2L13Q9BXK5 485 aa12.79□□□□□ -0.36
SOX2-OT-244ENST00000627738 LGR6Q9HBX8 967 aa12.79□□□□□ -0.36
SOX2-OT-244ENST00000627738 SPG7Q9UQ90 795 aa12.79□□□□□ -0.36
SOX2-OT-244ENST00000627738 CEMIPQ8WUJ3 1361 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms