RNA–Protein interactions for RNA: ENST00000627714.2

PTBP1-220, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 2,201 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-220ENST00000627714 KLHL40Q2TBA0 621 aa23.56■■□□□ 1.36
PTBP1-220ENST00000627714 PXDNLA1KZ92 1463 aa23.56■■□□□ 1.36
PTBP1-220ENST00000627714 RGPD8O14715 1765 aaPredicted RBP23.56■■□□□ 1.36
PTBP1-220ENST00000627714 XRN1Q8IZH2 1706 aaKnown RBP23.56■■□□□ 1.36
PTBP1-220ENST00000627714 GNAT3A8MTJ3 354 aa23.55■■□□□ 1.36
PTBP1-220ENST00000627714 F6X3S4 739 aa23.55■■□□□ 1.36
PTBP1-220ENST00000627714 CYP2E1P05181 493 aaPredicted RBP23.54■■□□□ 1.36
PTBP1-220ENST00000627714 FLIIQ13045 1269 aa23.54■■□□□ 1.36
PTBP1-220ENST00000627714 LRRCC1Q9C099 1032 aa23.53■■□□□ 1.36
PTBP1-220ENST00000627714 MAP3K5Q99683 1374 aa23.52■■□□□ 1.36
PTBP1-220ENST00000627714 SALL3Q9BXA9 1300 aa23.52■■□□□ 1.36
PTBP1-220ENST00000627714 TUBGCP6Q96RT7 1819 aa23.52■■□□□ 1.36
PTBP1-220ENST00000627714 CLCN1P35523 988 aa23.51■■□□□ 1.35
PTBP1-220ENST00000627714 NLRP6P59044 892 aa23.51■■□□□ 1.35
PTBP1-220ENST00000627714 FKBP5Q13451 457 aaPredicted RBP23.51■■□□□ 1.35
PTBP1-220ENST00000627714 NWD1Q149M9 1564 aa23.51■■□□□ 1.35
PTBP1-220ENST00000627714 HOXC9P31274 260 aa23.51■■□□□ 1.35
PTBP1-220ENST00000627714 ATP8B2P98198 1209 aa23.51■■□□□ 1.35
PTBP1-220ENST00000627714 SRCIN1Q9C0H9 1055 aa23.51■■□□□ 1.35
PTBP1-220ENST00000627714 MARF1Q9Y4F3 1742 aaKnown RBP23.5■■□□□ 1.35
PTBP1-220ENST00000627714 THEMISQ8N1K5 641 aaPredicted RBP23.5■■□□□ 1.35
PTBP1-220ENST00000627714 DDX49Q9Y6V7 483 aaKnown RBP23.5■■□□□ 1.35
PTBP1-220ENST00000627714 MCM2P49736 904 aa23.49■■□□□ 1.35
PTBP1-220ENST00000627714 GAS2L3Q86XJ1 694 aa23.49■■□□□ 1.35
PTBP1-220ENST00000627714 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.49■■□□□ 1.35
PTBP1-220ENST00000627714 MX1P20591 662 aa23.48■■□□□ 1.35
PTBP1-220ENST00000627714 AOX1Q06278 1338 aa23.48■■□□□ 1.35
PTBP1-220ENST00000627714 MCCP23508 829 aa23.48■■□□□ 1.35
PTBP1-220ENST00000627714 TAF7Q15545 349 aaPredicted RBP23.48■■□□□ 1.35
PTBP1-220ENST00000627714 EXOC6BQ9Y2D4 811 aa23.48■■□□□ 1.35
PTBP1-220ENST00000627714 CEBPAP49715 358 aaPredicted RBP23.47■■□□□ 1.35
PTBP1-220ENST00000627714 STAP2Q9UGK3 403 aa23.47■■□□□ 1.35
PTBP1-220ENST00000627714 ANAPC15P60006 121 aa23.46■■□□□ 1.35
PTBP1-220ENST00000627714 ESYT1Q9BSJ8 1104 aa23.46■■□□□ 1.35
PTBP1-220ENST00000627714 EPB41L2O43491 1005 aaKnown RBP23.45■■□□□ 1.34
PTBP1-220ENST00000627714 MCTP1Q6DN14 999 aa23.45■■□□□ 1.34
PTBP1-220ENST00000627714 TRIM44Q96DX7 344 aaPredicted RBP23.45■■□□□ 1.34
PTBP1-220ENST00000627714 CHMP4AQ9BY43 222 aa23.45■■□□□ 1.34
PTBP1-220ENST00000627714 AK9Q5TCS8 1911 aa23.45■■□□□ 1.34
PTBP1-220ENST00000627714 ZNF445P59923 1031 aa23.44■■□□□ 1.34
PTBP1-220ENST00000627714 IL17REQ8NFR9 667 aa23.44■■□□□ 1.34
PTBP1-220ENST00000627714 FER1L4A9Z1Z3 1794 aa23.43■■□□□ 1.34
PTBP1-220ENST00000627714 PNMA6EA0A0J9YXQ4 647 aa23.43■■□□□ 1.34
PTBP1-220ENST00000627714 IL17RAQ96F46 866 aa23.43■■□□□ 1.34
PTBP1-220ENST00000627714 LMBRD1Q9NUN5 540 aa23.43■■□□□ 1.34
PTBP1-220ENST00000627714 CCDC173Q0VFZ6 552 aa23.42■■□□□ 1.34
PTBP1-220ENST00000627714 UBTFL1P0CB47 393 aaPredicted RBP23.41■■□□□ 1.34
PTBP1-220ENST00000627714 ANP32BQ92688 251 aaKnown RBP23.41■■□□□ 1.34
PTBP1-220ENST00000627714 ESPNB1AK53 854 aa23.41■■□□□ 1.34
PTBP1-220ENST00000627714 LRRFIP2Q9Y608 721 aaKnown RBP23.41■■□□□ 1.34
PTBP1-220ENST00000627714 RAB11FIP3O75154 756 aa23.4■■□□□ 1.34
PTBP1-220ENST00000627714 CHMLP26374 656 aa23.4■■□□□ 1.34
PTBP1-220ENST00000627714 NEK4P51957 841 aa23.4■■□□□ 1.34
PTBP1-220ENST00000627714 ZGPATQ8N5A5 531 aaKnown RBP23.4■■□□□ 1.34
PTBP1-220ENST00000627714 ABTB2Q8N961 1025 aa23.4■■□□□ 1.34
PTBP1-220ENST00000627714 NASPP49321 788 aaPredicted RBP23.4■■□□□ 1.34
PTBP1-220ENST00000627714 USP44Q9H0E7 712 aa23.4■■□□□ 1.34
PTBP1-220ENST00000627714 HOXB7P09629 217 aa23.39■■□□□ 1.34
PTBP1-220ENST00000627714 HDGFL1Q5TGJ6 251 aa23.39■■□□□ 1.34
PTBP1-220ENST00000627714 SSH3Q8TE77 659 aa23.39■■□□□ 1.34
PTBP1-220ENST00000627714 PKP1Q13835 747 aa23.39■■□□□ 1.33
PTBP1-220ENST00000627714 PPP1R9BQ96SB3 815 aa23.39■■□□□ 1.33
PTBP1-220ENST00000627714 CEMIPQ8WUJ3 1361 aa23.39■■□□□ 1.33
PTBP1-220ENST00000627714 MED1Q15648 1581 aaPredicted RBP23.38■■□□□ 1.33
PTBP1-220ENST00000627714 TRIM6-TRIM34B2RNG4 842 aa23.38■■□□□ 1.33
PTBP1-220ENST00000627714 INTS4Q96HW7 963 aaKnown RBP23.38■■□□□ 1.33
PTBP1-220ENST00000627714 CUL4AQ13619 759 aa23.37■■□□□ 1.33
PTBP1-220ENST00000627714 PLPPR3Q6T4P5 718 aa23.37■■□□□ 1.33
PTBP1-220ENST00000627714 TMX3Q96JJ7 454 aa23.37■■□□□ 1.33
PTBP1-220ENST00000627714 KCNA6P17658 529 aa23.37■■□□□ 1.33
PTBP1-220ENST00000627714 NECTIN2Q92692 538 aa23.37■■□□□ 1.33
PTBP1-220ENST00000627714 RILPL2Q969X0 211 aa23.37■■□□□ 1.33
PTBP1-220ENST00000627714 LTN1O94822 1766 aa23.37■■□□□ 1.33
PTBP1-220ENST00000627714 ZDHHC9Q9Y397 364 aa23.36■■□□□ 1.33
PTBP1-220ENST00000627714 TSHZ3Q63HK5 1081 aa23.36■■□□□ 1.33
PTBP1-220ENST00000627714 ANO2Q9NQ90 1003 aa23.36■■□□□ 1.33
PTBP1-220ENST00000627714 ZSCAN23Q3MJ62 389 aa23.35■■□□□ 1.33
PTBP1-220ENST00000627714 POLA2Q14181 598 aa23.35■■□□□ 1.33
PTBP1-220ENST00000627714 CAVIN1Q6NZI2 390 aaKnown RBP23.35■■□□□ 1.33
PTBP1-220ENST00000627714 NUTM2GQ5VZR2 741 aa23.34■■□□□ 1.33
PTBP1-220ENST00000627714 IP6K1Q92551 441 aa23.34■■□□□ 1.33
PTBP1-220ENST00000627714 KDM3BQ7LBC6 1761 aa23.34■■□□□ 1.33
PTBP1-220ENST00000627714 LTV1Q96GA3 475 aaPredicted RBP23.33■■□□□ 1.33
PTBP1-220ENST00000627714 NCLP19338 710 aaKnown RBP23.33■■□□□ 1.33
PTBP1-220ENST00000627714 ADGRL3Q9HAR2 1447 aa23.32■■□□□ 1.32
PTBP1-220ENST00000627714 PRPF40AO75400 957 aaKnown RBP23.32■■□□□ 1.32
PTBP1-220ENST00000627714 NFAT5O94916 1531 aa23.32■■□□□ 1.32
PTBP1-220ENST00000627714 PHRF1Q9P1Y6 1649 aaKnown RBP23.32■■□□□ 1.32
PTBP1-220ENST00000627714 MBD3O95983 291 aa23.31■■□□□ 1.32
PTBP1-220ENST00000627714 HSP90AB4PQ58FF6 505 aa23.31■■□□□ 1.32
PTBP1-220ENST00000627714 PHF8Q9UPP1 1060 aa23.31■■□□□ 1.32
PTBP1-220ENST00000627714 BRD1O95696 1058 aa23.31■■□□□ 1.32
PTBP1-220ENST00000627714 PPP1R42Q7Z4L9 355 aa23.31■■□□□ 1.32
PTBP1-220ENST00000627714 KIF1BPQ96EK5 621 aa23.31■■□□□ 1.32
PTBP1-220ENST00000627714 PALD1Q9ULE6 856 aa23.31■■□□□ 1.32
PTBP1-220ENST00000627714 EIF4A1P60842 406 aaKnown RBP23.3■■□□□ 1.32
PTBP1-220ENST00000627714 PHAXQ9H814 394 aaKnown RBP23.3■■□□□ 1.32
PTBP1-220ENST00000627714 LMO7Q8WWI1 1683 aa23.3■■□□□ 1.32
PTBP1-220ENST00000627714 ERBB4Q15303 1308 aa23.29■■□□□ 1.32
PTBP1-220ENST00000627714 SURF6O75683 361 aaKnown RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms