RNA–Protein interactions for RNA: ENST00000625364.1

PPA1-206, Transcript of pyrophosphatase (inorganic) 1, human

TSL 5 BASIC

Gene PPA1, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPA1-206	ENST00000625364	ATP6V1A	P38606	617 aa		20.17	■□□□□ 0.82
PPA1-206	ENST00000625364	ARHGAP27	Q6ZUM4	889 aa		20.17	■□□□□ 0.82
PPA1-206	ENST00000625364	SPG7	Q9UQ90	795 aa		20.17	■□□□□ 0.82
PPA1-206	ENST00000625364	BRCA1	P38398	1863 aa	Known RBP	20.17	■□□□□ 0.82
PPA1-206	ENST00000625364		A0A0G2JLW4	131 aa		20.16	■□□□□ 0.82
PPA1-206	ENST00000625364	ASAP1	Q9ULH1	1129 aa		20.16	■□□□□ 0.82
PPA1-206	ENST00000625364	RBM46	Q8TBY0	533 aa	Known RBP	20.15	■□□□□ 0.82
PPA1-206	ENST00000625364	C4A	P0C0L4	1744 aa		20.14	■□□□□ 0.81
PPA1-206	ENST00000625364	C16orf71	Q8IYS4	520 aa	Predicted RBP	20.14	■□□□□ 0.81
PPA1-206	ENST00000625364	EMILIN1	Q9Y6C2	1016 aa		20.14	■□□□□ 0.81
PPA1-206	ENST00000625364	ARFGEF1	Q9Y6D6	1849 aa		20.13	■□□□□ 0.81
PPA1-206	ENST00000625364	PLEKHG2	Q9H7P9	1386 aa		20.13	■□□□□ 0.81
PPA1-206	ENST00000625364	FCHSD2	O94868	740 aa		20.13	■□□□□ 0.81
PPA1-206	ENST00000625364	NLGN1	Q8N2Q7	840 aa		20.13	■□□□□ 0.81
PPA1-206	ENST00000625364	KLRG1	Q96E93	195 aa		20.13	■□□□□ 0.81
PPA1-206	ENST00000625364	CCDC87	Q9NVE4	849 aa		20.13	■□□□□ 0.81
PPA1-206	ENST00000625364	DPEP1	P16444	411 aa		20.12	■□□□□ 0.81
PPA1-206	ENST00000625364	TMF1	P82094	1093 aa		20.12	■□□□□ 0.81
PPA1-206	ENST00000625364	TRAPPC3L	Q5T215	181 aa		20.12	■□□□□ 0.81
PPA1-206	ENST00000625364	RTCB	Q9Y3I0	505 aa	Known RBP	20.12	■□□□□ 0.81
PPA1-206	ENST00000625364	ANKRD26	Q9UPS8	1709 aa		20.12	■□□□□ 0.81
PPA1-206	ENST00000625364	KDR	P35968	1356 aa		20.11	■□□□□ 0.81
PPA1-206	ENST00000625364	HTRA3	P83110	453 aa		20.11	■□□□□ 0.81
PPA1-206	ENST00000625364	C9orf131	Q5VYM1	1079 aa		20.11	■□□□□ 0.81
PPA1-206	ENST00000625364	ATG3	Q9NT62	314 aa		20.11	■□□□□ 0.81
PPA1-206	ENST00000625364	COL13A1	Q5TAT6	717 aa	Predicted RBP	20.1	■□□□□ 0.81
PPA1-206	ENST00000625364	IFNL2	Q8IZJ0	200 aa		20.1	■□□□□ 0.81
PPA1-206	ENST00000625364	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	20.1	■□□□□ 0.81	2e-6	■■□□□ 14.5
PPA1-206	ENST00000625364	ZNF831	Q5JPB2	1677 aa		20.1	■□□□□ 0.81
PPA1-206	ENST00000625364	PPM1G	O15355	546 aa	Predicted RBP	20.09	■□□□□ 0.81
PPA1-206	ENST00000625364	PHKG2	P15735	406 aa		20.09	■□□□□ 0.81
PPA1-206	ENST00000625364	ADRA2B	P18089	450 aa		20.09	■□□□□ 0.81
PPA1-206	ENST00000625364	FSTL1	Q12841	308 aa		20.09	■□□□□ 0.81
PPA1-206	ENST00000625364	JMY	Q8N9B5	988 aa		20.09	■□□□□ 0.81
PPA1-206	ENST00000625364	COL5A3	P25940	1745 aa	Predicted RBP	20.09	■□□□□ 0.81
PPA1-206	ENST00000625364	KCP	Q6ZWJ8	1503 aa		20.08	■□□□□ 0.81
PPA1-206	ENST00000625364	EYA1	Q99502	592 aa		20.08	■□□□□ 0.81
PPA1-206	ENST00000625364	PARP3	Q9Y6F1	533 aa		20.08	■□□□□ 0.81
PPA1-206	ENST00000625364	KDM2B	Q8NHM5	1336 aa		20.07	■□□□□ 0.8
PPA1-206	ENST00000625364	CAPN15	O75808	1086 aa		20.07	■□□□□ 0.8
PPA1-206	ENST00000625364	GYS1	P13807	737 aa		20.07	■□□□□ 0.8
PPA1-206	ENST00000625364	ARHGEF1	Q92888	912 aa	Known RBP	20.07	■□□□□ 0.8
PPA1-206	ENST00000625364	TNRC6C	Q9HCJ0	1690 aa	Known RBP	20.07	■□□□□ 0.8
PPA1-206	ENST00000625364	RFC4	P35249	363 aa		20.06	■□□□□ 0.8
PPA1-206	ENST00000625364	WASHC2A	Q641Q2	1341 aa		20.05	■□□□□ 0.8
PPA1-206	ENST00000625364	CNTNAP4	Q9C0A0	1308 aa		20.05	■□□□□ 0.8
PPA1-206	ENST00000625364	MYH14	Q7Z406	1995 aa	Known RBP	20.05	■□□□□ 0.8
PPA1-206	ENST00000625364	RC3H1	Q5TC82	1133 aa	Known RBP	20.05	■□□□□ 0.8
PPA1-206	ENST00000625364	SLC4A9	Q96Q91	983 aa		20.05	■□□□□ 0.8
PPA1-206	ENST00000625364	RBM42	Q9BTD8	480 aa	Known RBP	20.05	■□□□□ 0.8
PPA1-206	ENST00000625364	KCNA3	P22001	575 aa		20.04	■□□□□ 0.8
PPA1-206	ENST00000625364	TNS4	Q8IZW8	715 aa		20.04	■□□□□ 0.8
PPA1-206	ENST00000625364	RNF181	Q9P0P0	153 aa		20.04	■□□□□ 0.8
PPA1-206	ENST00000625364	PIM2	Q9P1W9	311 aa		20.04	■□□□□ 0.8
PPA1-206	ENST00000625364	RPS6KA4	O75676	772 aa		20.03	■□□□□ 0.8
PPA1-206	ENST00000625364	CDCA8	Q53HL2	280 aa		20.03	■□□□□ 0.8
PPA1-206	ENST00000625364	DCAF5	Q96JK2	942 aa		20.03	■□□□□ 0.8
PPA1-206	ENST00000625364	SBF1	O95248	1867 aa		20.03	■□□□□ 0.8
PPA1-206	ENST00000625364	DALRD3	Q5D0E6	543 aa	Known RBP	20.02	■□□□□ 0.8
PPA1-206	ENST00000625364	CARD14	Q9BXL6	1004 aa		20.02	■□□□□ 0.8
PPA1-206	ENST00000625364	RRAGC	Q9HB90	399 aa		20.01	■□□□□ 0.79
PPA1-206	ENST00000625364	ERVV-2	B6SEH9	535 aa		20	■□□□□ 0.79
PPA1-206	ENST00000625364	PRELP	P51888	382 aa		19.99	■□□□□ 0.79
PPA1-206	ENST00000625364	SMC1B	Q8NDV3	1235 aa		19.99	■□□□□ 0.79
PPA1-206	ENST00000625364	HSP90AB1	P08238	724 aa	Known RBP	19.97	■□□□□ 0.79
PPA1-206	ENST00000625364	CHRNA5	P30532	468 aa		19.96	■□□□□ 0.79
PPA1-206	ENST00000625364	DDR1	Q08345	913 aa		19.96	■□□□□ 0.79
PPA1-206	ENST00000625364	EIF4A2	Q14240	407 aa	Known RBP	19.96	■□□□□ 0.79
PPA1-206	ENST00000625364	FKBP8	Q14318	412 aa		19.96	■□□□□ 0.79
PPA1-206	ENST00000625364	POLK	Q9UBT6	870 aa		19.96	■□□□□ 0.79
PPA1-206	ENST00000625364	SRP68	Q9UHB9	627 aa	Known RBP	19.96	■□□□□ 0.79
PPA1-206	ENST00000625364	USP42	Q9H9J4	1324 aa	Known RBP	19.96	■□□□□ 0.79
PPA1-206	ENST00000625364	KDM6A	O15550	1401 aa	Predicted RBP	19.95	■□□□□ 0.78
PPA1-206	ENST00000625364	CRKL	P46109	303 aa	Known RBP	19.94	■□□□□ 0.78
PPA1-206	ENST00000625364	CABP4	P57796	275 aa		19.94	■□□□□ 0.78
PPA1-206	ENST00000625364	ZC3H4	Q9UPT8	1303 aa	Known RBP	19.94	■□□□□ 0.78
PPA1-206	ENST00000625364	TJP1	Q07157	1748 aa		19.93	■□□□□ 0.78
PPA1-206	ENST00000625364	PTCD1	O75127	700 aa	Known RBP	19.92	■□□□□ 0.78
PPA1-206	ENST00000625364	HSPA1A	P0DMV8	641 aa	Known RBP	19.92	■□□□□ 0.78
PPA1-206	ENST00000625364	HSPA1B	P0DMV9	641 aa	Known RBP	19.92	■□□□□ 0.78
PPA1-206	ENST00000625364	RASSF7	Q02833	373 aa		19.92	■□□□□ 0.78
PPA1-206	ENST00000625364	ZNF530	Q6P9A1	599 aa	Predicted RBP	19.92	■□□□□ 0.78
PPA1-206	ENST00000625364	POLRMT	O00411	1230 aa	Known RBP	19.91	■□□□□ 0.78
PPA1-206	ENST00000625364	PLEKHO1	Q53GL0	409 aa	Predicted RBP	19.91	■□□□□ 0.78
PPA1-206	ENST00000625364	ADAMTS7	Q9UKP4	1686 aa		19.9	■□□□□ 0.78
PPA1-206	ENST00000625364	TIAM2	Q8IVF5	1701 aa		19.9	■□□□□ 0.78
PPA1-206	ENST00000625364	TNNT2	P45379	298 aa	Predicted RBP	19.89	■□□□□ 0.77
PPA1-206	ENST00000625364	CCDC88A	Q3V6T2	1871 aa		19.88	■□□□□ 0.77
PPA1-206	ENST00000625364	AFDN	P55196	1824 aa	Known RBP	19.88	■□□□□ 0.77
PPA1-206	ENST00000625364	DLEC1	Q9Y238	1755 aa		19.88	■□□□□ 0.77
PPA1-206	ENST00000625364	VEGFA	P15692	232 aa	Predicted RBP	19.88	■□□□□ 0.77
PPA1-206	ENST00000625364	LMNB1	P20700	586 aa		19.88	■□□□□ 0.77
PPA1-206	ENST00000625364	MTHFS	P49914	203 aa		19.88	■□□□□ 0.77
PPA1-206	ENST00000625364	AMOT	Q4VCS5	1084 aa		19.88	■□□□□ 0.77
PPA1-206	ENST00000625364	GLTPD2	A6NH11	291 aa		19.87	■□□□□ 0.77
PPA1-206	ENST00000625364	TM4SF1	P30408	202 aa		19.87	■□□□□ 0.77
PPA1-206	ENST00000625364	ZPR1	O75312	459 aa		19.86	■□□□□ 0.77
PPA1-206	ENST00000625364	C1orf141	Q5JVX7	400 aa		19.86	■□□□□ 0.77
PPA1-206	ENST00000625364	USPL1	Q5W0Q7	1092 aa		19.85	■□□□□ 0.77
PPA1-206	ENST00000625364	INTS5	Q6P9B9	1019 aa	Known RBP	19.85	■□□□□ 0.77

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms