RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 SARNPP82979 210 aaKnown RBP11.11□□□□□ -0.63
USB1-216ENST00000624720 C11orf91Q3C1V1 193 aa11.11□□□□□ -0.63
USB1-216ENST00000624720 SWT1Q5T5J6 900 aaKnown RBP11.11□□□□□ -0.63
USB1-216ENST00000624720 PMFBP1Q8TBY8 1022 aa11.11□□□□□ -0.63
USB1-216ENST00000624720 ARHGAP31Q2M1Z3 1444 aa11.11□□□□□ -0.63
USB1-216ENST00000624720 MYOM2P54296 1465 aa11.11□□□□□ -0.63
USB1-216ENST00000624720 UVSSAQ2YD98 709 aa11.1□□□□□ -0.63
USB1-216ENST00000624720 CCDC173Q0VFZ6 552 aa11.1□□□□□ -0.63
USB1-216ENST00000624720 PIAS4Q8N2W9 510 aaPredicted RBP11.1□□□□□ -0.63
USB1-216ENST00000624720 FEZ1Q99689 392 aa11.1□□□□□ -0.63
USB1-216ENST00000624720 DDX49Q9Y6V7 483 aaKnown RBP11.1□□□□□ -0.63
USB1-216ENST00000624720 A2ML1A8K2U0 1454 aa11.1□□□□□ -0.63
USB1-216ENST00000624720 NEXMIFQ5QGS0 1516 aa11.1□□□□□ -0.63
USB1-216ENST00000624720 U2SURPO15042 1029 aaKnown RBP11.1□□□□□ -0.63
USB1-216ENST00000624720 APBB1IPQ7Z5R6 666 aaPredicted RBP11.1□□□□□ -0.63
USB1-216ENST00000624720 ACRBPQ8NEB7 543 aa11.1□□□□□ -0.63
USB1-216ENST00000624720 EID1Q9Y6B2 187 aa11.1□□□□□ -0.63
USB1-216ENST00000624720 MYO5BQ9ULV0 1848 aa11.09□□□□□ -0.63
USB1-216ENST00000624720 FOXD4Q12950 439 aaPredicted RBP11.09□□□□□ -0.63
USB1-216ENST00000624720 NOL8Q76FK4 1167 aaKnown RBP11.09□□□□□ -0.63
USB1-216ENST00000624720 PARD3Q8TEW0 1356 aa11.09□□□□□ -0.63
USB1-216ENST00000624720 YTHDC2Q9H6S0 1430 aaKnown RBP11.09□□□□□ -0.63
USB1-216ENST00000624720 C3P01024 1663 aa11.09□□□□□ -0.63
USB1-216ENST00000624720 MTHFSP49914 203 aa11.09□□□□□ -0.63
USB1-216ENST00000624720 RBM26Q5T8P6 1007 aaKnown RBP11.09□□□□□ -0.63
USB1-216ENST00000624720 ZNF280DQ6N043 979 aa11.09□□□□□ -0.63
USB1-216ENST00000624720 XPCQ01831 940 aaPredicted RBP11.08□□□□□ -0.64
USB1-216ENST00000624720 RPAINQ86UA6 219 aa11.08□□□□□ -0.64
USB1-216ENST00000624720 PDCL2Q8N4E4 241 aa11.08□□□□□ -0.64
USB1-216ENST00000624720 MYRIPQ8NFW9 859 aa11.08□□□□□ -0.64
USB1-216ENST00000624720 MTA3Q9BTC8 594 aa11.08□□□□□ -0.64
USB1-216ENST00000624720 ZC3H13Q5T200 1668 aaKnown RBP11.08□□□□□ -0.64
USB1-216ENST00000624720 APAF1O14727 1248 aa11.08□□□□□ -0.64
USB1-216ENST00000624720 OGFRQ9NZT2 677 aa11.08□□□□□ -0.64
USB1-216ENST00000624720 PLIN1O60240 522 aa11.07□□□□□ -0.64
USB1-216ENST00000624720 CCDC91Q7Z6B0 441 aa11.07□□□□□ -0.64
USB1-216ENST00000624720 CREBRFQ8IUR6 639 aa11.07□□□□□ -0.64
USB1-216ENST00000624720 FAM184AQ8NB25 1140 aa11.07□□□□□ -0.64
USB1-216ENST00000624720 PAXBP1Q9Y5B6 917 aa11.07□□□□□ -0.64
USB1-216ENST00000624720 LMTK3Q96Q04 1460 aa11.07□□□□□ -0.64
USB1-216ENST00000624720 MFSD4BQ5TF39 518 aa11.07□□□□□ -0.64
USB1-216ENST00000624720 RAD51AP2Q09MP3 1159 aa11.06□□□□□ -0.64
USB1-216ENST00000624720 AMOTL2Q9Y2J4 779 aa11.06□□□□□ -0.64
USB1-216ENST00000624720 BRD4O60885 1362 aaPredicted RBP11.06□□□□□ -0.64
USB1-216ENST00000624720 CAND2O75155 1236 aa11.06□□□□□ -0.64
USB1-216ENST00000624720 HDGFL1Q5TGJ6 251 aa11.06□□□□□ -0.64
USB1-216ENST00000624720 PPP1R9BQ96SB3 815 aa11.06□□□□□ -0.64
USB1-216ENST00000624720 ADGRB1O14514 1584 aa11.06□□□□□ -0.64
USB1-216ENST00000624720 HSPA2P54652 639 aa11.06□□□□□ -0.64
USB1-216ENST00000624720 RHBDL3P58872 404 aa11.06□□□□□ -0.64
USB1-216ENST00000624720 ERCC4Q92889 916 aaPredicted RBP11.06□□□□□ -0.64
USB1-216ENST00000624720 TPD52L2O43399 206 aaKnown RBP11.05□□□□□ -0.64
USB1-216ENST00000624720 PAX3P23760 479 aa11.05□□□□□ -0.64
USB1-216ENST00000624720 ABCD1P33897 745 aa11.05□□□□□ -0.64
USB1-216ENST00000624720 TERF2Q15554 542 aa11.05□□□□□ -0.64
USB1-216ENST00000624720 NME9Q86XW9 330 aa11.05□□□□□ -0.64
USB1-216ENST00000624720 A0A1W2PP64 1363 aa11.05□□□□□ -0.64
USB1-216ENST00000624720 TMEM2Q9UHN6 1383 aa11.05□□□□□ -0.64
USB1-216ENST00000624720 ERICH4A6NGS2 130 aa11.05□□□□□ -0.64
USB1-216ENST00000624720 U2AF1L5P0DN76 240 aaPredicted RBP11.05□□□□□ -0.64
USB1-216ENST00000624720 HDGFP51858 240 aaKnown RBP11.05□□□□□ -0.64
USB1-216ENST00000624720 U2AF1Q01081 240 aaKnown RBP eCLIP11.05□□□□□ -0.64
USB1-216ENST00000624720 TRDNQ13061 729 aa11.05□□□□□ -0.64
USB1-216ENST00000624720 HS1BP3Q53T59 392 aa11.05□□□□□ -0.64
USB1-216ENST00000624720 DRC1Q96MC2 740 aa11.05□□□□□ -0.64
USB1-216ENST00000624720 JRKLQ9Y4A0 524 aa11.05□□□□□ -0.64
USB1-216ENST00000624720 ZNF142P52746 1687 aaPredicted RBP11.05□□□□□ -0.64
USB1-216ENST00000624720 SETD1BQ9UPS6 1966 aaKnown RBP11.05□□□□□ -0.64
USB1-216ENST00000624720 TMEM131LA2VDJ0 1609 aa11.04□□□□□ -0.64
USB1-216ENST00000624720 NRXN1Q9ULB1 1477 aa11.04□□□□□ -0.64
USB1-216ENST00000624720 CGNL1Q0VF96 1302 aa11.04□□□□□ -0.64
USB1-216ENST00000624720 RAD50Q92878 1312 aa11.04□□□□□ -0.64
USB1-216ENST00000624720 CCDC181Q5TID7 509 aa11.04□□□□□ -0.64
USB1-216ENST00000624720 CADPS2Q86UW7 1296 aa11.04□□□□□ -0.64
USB1-216ENST00000624720 U2AF2P26368 475 aaKnown RBP eCLIP11.04□□□□□ -0.64
USB1-216ENST00000624720 CASQ1P31415 396 aa11.04□□□□□ -0.64
USB1-216ENST00000624720 NAP1L1P55209 391 aaKnown RBP11.04□□□□□ -0.64
USB1-216ENST00000624720 RRS1Q15050 365 aaKnown RBP11.04□□□□□ -0.64
USB1-216ENST00000624720 MAP9Q49MG5 647 aa11.04□□□□□ -0.64
USB1-216ENST00000624720 NUDT16Q96DE0 195 aaKnown RBP11.04□□□□□ -0.64
USB1-216ENST00000624720 MAF1Q9H063 256 aa11.04□□□□□ -0.64
USB1-216ENST00000624720 ASXL1Q8IXJ9 1541 aa11.04□□□□□ -0.64
USB1-216ENST00000624720 IQGAP1P46940 1657 aa11.04□□□□□ -0.64
USB1-216ENST00000624720 HDGFL2Q7Z4V5 671 aaPredicted RBP11.03□□□□□ -0.64
USB1-216ENST00000624720 IRAK4Q9NWZ3 460 aa11.03□□□□□ -0.64
USB1-216ENST00000624720 NOL7Q9UMY1 257 aaKnown RBP11.03□□□□□ -0.64
USB1-216ENST00000624720 PPLO60437 1756 aa11.03□□□□□ -0.64
USB1-216ENST00000624720 GOLGA6L6A8MZA4 724 aa11.03□□□□□ -0.64
USB1-216ENST00000624720 KCNA6P17658 529 aa11.03□□□□□ -0.64
USB1-216ENST00000624720 ATP6V1AP38606 617 aa11.03□□□□□ -0.64
USB1-216ENST00000624720 GSCP56915 257 aaPredicted RBP11.03□□□□□ -0.64
USB1-216ENST00000624720 THEMISQ8N1K5 641 aaPredicted RBP11.03□□□□□ -0.64
USB1-216ENST00000624720 DEF6Q9H4E7 631 aa11.03□□□□□ -0.64
USB1-216ENST00000624720 ROBO2Q9HCK4 1378 aa11.03□□□□□ -0.64
USB1-216ENST00000624720 FYB1O15117 783 aa11.02□□□□□ -0.64
USB1-216ENST00000624720 KLHL23Q8NBE8 558 aa11.02□□□□□ -0.64
USB1-216ENST00000624720 KCNV2Q8TDN2 545 aa11.02□□□□□ -0.64
USB1-216ENST00000624720 EVI5LQ96CN4 794 aa11.02□□□□□ -0.64
USB1-216ENST00000624720 TESPA1A2RU30 521 aaPredicted RBP11.02□□□□□ -0.65
USB1-216ENST00000624720 WASLO00401 505 aaPredicted RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms