RNA–Protein interactions for RNA: ENST00000622698.4

PCDH11Y-207, Transcript of protocadherin 11 Y-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11Y, Length 4,824 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11Y-207ENST00000622698 PDE3AQ14432 1141 aa13.51□□□□□ -0.25
PCDH11Y-207ENST00000622698 MCM10Q7L590 875 aa13.51□□□□□ -0.25
PCDH11Y-207ENST00000622698 NECTIN2Q92692 538 aa13.51□□□□□ -0.25
PCDH11Y-207ENST00000622698 SEPT12Q8IYM1 358 aa13.51□□□□□ -0.25
PCDH11Y-207ENST00000622698 TFCP2L1Q9NZI6 479 aa13.51□□□□□ -0.25
PCDH11Y-207ENST00000622698 POLR1AO95602 1720 aaPredicted RBP13.51□□□□□ -0.25
PCDH11Y-207ENST00000622698 CHMP4CQ96CF2 233 aa13.51□□□□□ -0.25
PCDH11Y-207ENST00000622698 USP19O94966 1318 aa13.5□□□□□ -0.25
PCDH11Y-207ENST00000622698 IGHMBP2P38935 993 aaKnown RBP13.5□□□□□ -0.25
PCDH11Y-207ENST00000622698 ANP32AP39687 249 aaKnown RBP13.5□□□□□ -0.25
PCDH11Y-207ENST00000622698 NCAPD2Q15021 1401 aa13.5□□□□□ -0.25
PCDH11Y-207ENST00000622698 CPDO75976 1380 aa13.5□□□□□ -0.25
PCDH11Y-207ENST00000622698 BARGINQ6ZT62 677 aa13.5□□□□□ -0.25
PCDH11Y-207ENST00000622698 PARP3Q9Y6F1 533 aa13.5□□□□□ -0.25
PCDH11Y-207ENST00000622698 TRAPPC3LQ5T215 181 aa13.5□□□□□ -0.25
PCDH11Y-207ENST00000622698 ACSBG1Q96GR2 724 aa13.5□□□□□ -0.25
PCDH11Y-207ENST00000622698 IGSF1Q8N6C5 1336 aa13.49□□□□□ -0.25
PCDH11Y-207ENST00000622698 MTHFSDQ2M296 383 aaKnown RBP13.49□□□□□ -0.25
PCDH11Y-207ENST00000622698 RSPH6AQ9H0K4 717 aa13.49□□□□□ -0.25
PCDH11Y-207ENST00000622698 SENP3-EIF4A1A0A087X0R7 540 aa13.49□□□□□ -0.25
PCDH11Y-207ENST00000622698 GNAI2P04899 355 aa13.49□□□□□ -0.25
PCDH11Y-207ENST00000622698 SLC52A2Q9HAB3 445 aa13.49□□□□□ -0.25
PCDH11Y-207ENST00000622698 CCDC57Q2TAC2 916 aa13.48□□□□□ -0.25
PCDH11Y-207ENST00000622698 NBPF6Q5VWK0 638 aa13.48□□□□□ -0.25
PCDH11Y-207ENST00000622698 NBPF4Q96M43 638 aa13.48□□□□□ -0.25
PCDH11Y-207ENST00000622698 ERC2O15083 957 aa13.48□□□□□ -0.25
PCDH11Y-207ENST00000622698 MYL6BP14649 208 aa13.48□□□□□ -0.25
PCDH11Y-207ENST00000622698 RPGRQ92834 1020 aaKnown RBP13.48□□□□□ -0.25
PCDH11Y-207ENST00000622698 MPHOSPH8Q99549 860 aa13.48□□□□□ -0.25
PCDH11Y-207ENST00000622698 PLEKHG2Q9H7P9 1386 aa13.48□□□□□ -0.25
PCDH11Y-207ENST00000622698 PDZRN3Q9UPQ7 1066 aa13.48□□□□□ -0.25
PCDH11Y-207ENST00000622698 PARP10Q53GL7 1025 aa13.48□□□□□ -0.25
PCDH11Y-207ENST00000622698 PNPLA6Q8IY17 1366 aa13.47□□□□□ -0.25
PCDH11Y-207ENST00000622698 IFIT2P09913 472 aaKnown RBP13.47□□□□□ -0.25
PCDH11Y-207ENST00000622698 SLFN5Q08AF3 891 aa13.47□□□□□ -0.25
PCDH11Y-207ENST00000622698 SETDB2Q96T68 719 aa13.47□□□□□ -0.25
PCDH11Y-207ENST00000622698 PHKG2P15735 406 aa13.47□□□□□ -0.25
PCDH11Y-207ENST00000622698 CLUAP1Q96AJ1 413 aa13.47□□□□□ -0.25
PCDH11Y-207ENST00000622698 CDC5LQ99459 802 aaKnown RBP13.47□□□□□ -0.25
PCDH11Y-207ENST00000622698 RRP1P56182 461 aaKnown RBP13.47□□□□□ -0.25
PCDH11Y-207ENST00000622698 USP32Q8NFA0 1604 aa13.46□□□□□ -0.25
PCDH11Y-207ENST00000622698 FAM83GA6ND36 823 aa13.46□□□□□ -0.26
PCDH11Y-207ENST00000622698 TPTE2Q6XPS3 522 aa13.45□□□□□ -0.26
PCDH11Y-207ENST00000622698 RUFY2Q8WXA3 655 aa13.45□□□□□ -0.26
PCDH11Y-207ENST00000622698 TRIM34Q9BYJ4 488 aa13.45□□□□□ -0.26
PCDH11Y-207ENST00000622698 CNNM1Q9NRU3 951 aa13.45□□□□□ -0.26
PCDH11Y-207ENST00000622698 CCDC87Q9NVE4 849 aa13.45□□□□□ -0.26
PCDH11Y-207ENST00000622698 PRIM1P49642 420 aaKnown RBP13.44□□□□□ -0.26
PCDH11Y-207ENST00000622698 NFATC2IPQ8NCF5 419 aa13.44□□□□□ -0.26
PCDH11Y-207ENST00000622698 DNAAF4Q8WXU2 420 aa13.44□□□□□ -0.26
PCDH11Y-207ENST00000622698 CWC25Q9NXE8 425 aaPredicted RBP13.44□□□□□ -0.26
PCDH11Y-207ENST00000622698 ALDH1L1O75891 902 aa13.44□□□□□ -0.26
PCDH11Y-207ENST00000622698 SLC27A3Q5K4L6 730 aa13.44□□□□□ -0.26
PCDH11Y-207ENST00000622698 AEBP1Q8IUX7 1158 aa13.44□□□□□ -0.26
PCDH11Y-207ENST00000622698 ARHGAP45Q92619 1136 aa13.44□□□□□ -0.26
PCDH11Y-207ENST00000622698 FGD1P98174 961 aa13.44□□□□□ -0.26
PCDH11Y-207ENST00000622698 ATF7IPQ6VMQ6 1270 aa13.44□□□□□ -0.26
PCDH11Y-207ENST00000622698 KNDC1Q76NI1 1749 aa13.44□□□□□ -0.26
PCDH11Y-207ENST00000622698 NBPF5PQ86XG9 351 aaPredicted RBP13.43□□□□□ -0.26
PCDH11Y-207ENST00000622698 MFAP1P55081 439 aaKnown RBP13.43□□□□□ -0.26
PCDH11Y-207ENST00000622698 ZNF790Q6PG37 636 aa13.43□□□□□ -0.26
PCDH11Y-207ENST00000622698 TRMT112Q9UI30 125 aaKnown RBP13.43□□□□□ -0.26
PCDH11Y-207ENST00000622698 AKAP2Q9Y2D5 859 aa13.43□□□□□ -0.26
PCDH11Y-207ENST00000622698 BECN1Q14457 450 aa13.43□□□□□ -0.26
PCDH11Y-207ENST00000622698 DDX46Q7L014 1031 aaKnown RBP13.43□□□□□ -0.26
PCDH11Y-207ENST00000622698 CLASRPQ8N2M8 674 aaKnown RBP13.43□□□□□ -0.26
PCDH11Y-207ENST00000622698 ADGRB2O60241 1585 aa13.43□□□□□ -0.26
PCDH11Y-207ENST00000622698 TSR2Q969E8 191 aaKnown RBP13.42□□□□□ -0.26
PCDH11Y-207ENST00000622698 BCL2L13Q9BXK5 485 aa13.42□□□□□ -0.26
PCDH11Y-207ENST00000622698 TBC1D2BQ9UPU7 963 aa13.42□□□□□ -0.26
PCDH11Y-207ENST00000622698 FANCIQ9NVI1 1328 aa13.42□□□□□ -0.26
PCDH11Y-207ENST00000622698 ANKRD13DQ6ZTN6 518 aa13.42□□□□□ -0.26
PCDH11Y-207ENST00000622698 RPAP2Q8IXW5 612 aaPredicted RBP13.42□□□□□ -0.26
PCDH11Y-207ENST00000622698 VSIG10Q8N0Z9 540 aa13.42□□□□□ -0.26
PCDH11Y-207ENST00000622698 CENPQQ7L2Z9 268 aaPredicted RBP13.41□□□□□ -0.26
PCDH11Y-207ENST00000622698 SSH2Q76I76 1423 aa13.41□□□□□ -0.26
PCDH11Y-207ENST00000622698 CCDC152Q4G0S7 254 aa13.41□□□□□ -0.26
PCDH11Y-207ENST00000622698 DZIP3Q86Y13 1208 aaKnown RBP13.41□□□□□ -0.26
PCDH11Y-207ENST00000622698 GNPATO15228 680 aa13.41□□□□□ -0.26
PCDH11Y-207ENST00000622698 CCDC158Q5M9N0 1113 aa13.41□□□□□ -0.26
PCDH11Y-207ENST00000622698 NLGN1Q8N2Q7 840 aa13.41□□□□□ -0.26
PCDH11Y-207ENST00000622698 NLRP3Q96P20 1036 aa13.41□□□□□ -0.26
PCDH11Y-207ENST00000622698 DDX21Q9NR30 783 aaKnown RBP eCLIP13.41□□□□□ -0.26
PCDH11Y-207ENST00000622698 CEP126Q9P2H0 1117 aa13.41□□□□□ -0.26
PCDH11Y-207ENST00000622698 NWD1Q149M9 1564 aa13.4□□□□□ -0.26
PCDH11Y-207ENST00000622698 SPATA31A5Q5VU36 1347 aa13.4□□□□□ -0.26
PCDH11Y-207ENST00000622698 SPATA31A7Q8IWB4 1347 aa13.4□□□□□ -0.26
PCDH11Y-207ENST00000622698 SPATA31A1Q5TZJ5 1347 aa13.4□□□□□ -0.26
PCDH11Y-207ENST00000622698 BICDL1Q6ZP65 573 aa13.4□□□□□ -0.26
PCDH11Y-207ENST00000622698 UTP14AQ9BVJ6 771 aaKnown RBP13.4□□□□□ -0.26
PCDH11Y-207ENST00000622698 SIGLEC1Q9BZZ2 1709 aa13.4□□□□□ -0.26
PCDH11Y-207ENST00000622698 ANKRD18BA2A2Z9 1011 aa13.4□□□□□ -0.26
PCDH11Y-207ENST00000622698 HIP1O00291 1037 aa13.4□□□□□ -0.26
PCDH11Y-207ENST00000622698 MBIPQ9NS73 344 aa13.4□□□□□ -0.26
PCDH11Y-207ENST00000622698 ADRA2BP18089 450 aa13.39□□□□□ -0.27
PCDH11Y-207ENST00000622698 ZSCAN25Q6NSZ9 544 aa13.39□□□□□ -0.27
PCDH11Y-207ENST00000622698 FAM177BA6PVY3 158 aa13.39□□□□□ -0.27
PCDH11Y-207ENST00000622698 DCTN1Q14203 1278 aa13.39□□□□□ -0.27
PCDH11Y-207ENST00000622698 SLF2Q8IX21 1173 aa13.39□□□□□ -0.27
PCDH11Y-207ENST00000622698 FLIIQ13045 1269 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms