RNA–Protein interactions for RNA: ENST00000621737.4

PTBP1-219, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5

Gene PTBP1, Length 1,125 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-219ENST00000621737 MAP3K5Q99683 1374 aa26.56■■□□□ 1.84
PTBP1-219ENST00000621737 MSH5O43196 834 aa26.55■■□□□ 1.84
PTBP1-219ENST00000621737 POLD1P28340 1107 aa26.55■■□□□ 1.84
PTBP1-219ENST00000621737 CABP4P57796 275 aa26.55■■□□□ 1.84
PTBP1-219ENST00000621737 AKAP4Q5JQC9 854 aa26.54■■□□□ 1.84
PTBP1-219ENST00000621737 LINC00116Q8NCU8 138 aa26.54■■□□□ 1.84
PTBP1-219ENST00000621737 ATP6V1AP38606 617 aa26.53■■□□□ 1.84
PTBP1-219ENST00000621737 ITPK1Q13572 414 aa26.53■■□□□ 1.84
PTBP1-219ENST00000621737 SYT17Q9BSW7 474 aa26.53■■□□□ 1.84
PTBP1-219ENST00000621737 DCAF8L1A6NGE4 600 aa26.51■■□□□ 1.83
PTBP1-219ENST00000621737 MRC1P22897 1456 aa26.5■■□□□ 1.83
PTBP1-219ENST00000621737 U2SURPO15042 1029 aaKnown RBP26.5■■□□□ 1.83
PTBP1-219ENST00000621737 CFAP53Q96M91 514 aa26.5■■□□□ 1.83
PTBP1-219ENST00000621737 COL5A3P25940 1745 aaPredicted RBP26.5■■□□□ 1.83
PTBP1-219ENST00000621737 ADAMTS7Q9UKP4 1686 aa26.5■■□□□ 1.83
PTBP1-219ENST00000621737 SSFA2P28290 1259 aa26.49■■□□□ 1.83
PTBP1-219ENST00000621737 AMIGO3Q86WK7 504 aa26.49■■□□□ 1.83
PTBP1-219ENST00000621737 NFATC2IPQ8NCF5 419 aa26.49■■□□□ 1.83
PTBP1-219ENST00000621737 VIRMAQ69YN4 1812 aaKnown RBP26.49■■□□□ 1.83
PTBP1-219ENST00000621737 RBM42Q9BTD8 480 aaKnown RBP26.48■■□□□ 1.83
PTBP1-219ENST00000621737 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.47■■□□□ 1.83
PTBP1-219ENST00000621737 PHF14O94880 888 aa26.47■■□□□ 1.83
PTBP1-219ENST00000621737 PPP2R1AP30153 589 aa26.47■■□□□ 1.83
PTBP1-219ENST00000621737 MTHFSDQ2M296 383 aaKnown RBP26.47■■□□□ 1.83
PTBP1-219ENST00000621737 SLC4A9Q96Q91 983 aa26.47■■□□□ 1.83
PTBP1-219ENST00000621737 CICQ96RK0 1608 aaPredicted RBP26.47■■□□□ 1.83
PTBP1-219ENST00000621737 MSL1Q68DK7 614 aa26.46■■□□□ 1.83
PTBP1-219ENST00000621737 GNPATO15228 680 aa26.45■■□□□ 1.82
PTBP1-219ENST00000621737 SLC52A2Q9HAB3 445 aa26.45■■□□□ 1.82
PTBP1-219ENST00000621737 RNMTO43148 476 aaKnown RBP26.44■■□□□ 1.82
PTBP1-219ENST00000621737 LGR6Q9HBX8 967 aa26.43■■□□□ 1.82
PTBP1-219ENST00000621737 TJP1Q07157 1748 aa26.42■■□□□ 1.82
PTBP1-219ENST00000621737 CNTNAP4Q9C0A0 1308 aa26.42■■□□□ 1.82
PTBP1-219ENST00000621737 SMIM5Q71RC9 77 aa26.42■■□□□ 1.82
PTBP1-219ENST00000621737 KLHL34Q8N239 644 aa26.42■■□□□ 1.82
PTBP1-219ENST00000621737 PTCD1O75127 700 aaKnown RBP26.41■■□□□ 1.82
PTBP1-219ENST00000621737 NUDCQ9Y266 331 aa26.41■■□□□ 1.82
PTBP1-219ENST00000621737 RC3H1Q5TC82 1133 aaKnown RBP26.4■■□□□ 1.82
PTBP1-219ENST00000621737 GAS2L2Q8NHY3 880 aa26.4■■□□□ 1.82
PTBP1-219ENST00000621737 RTCBQ9Y3I0 505 aaKnown RBP26.39■■□□□ 1.82
PTBP1-219ENST00000621737 RSPH6AQ9H0K4 717 aa26.38■■□□□ 1.81
PTBP1-219ENST00000621737 MYH14Q7Z406 1995 aaKnown RBP26.37■■□□□ 1.81
PTBP1-219ENST00000621737 KCPQ6ZWJ8 1503 aa26.36■■□□□ 1.81
PTBP1-219ENST00000621737 ADRA2BP18089 450 aa26.36■■□□□ 1.81
PTBP1-219ENST00000621737 PRKAR2BP31323 418 aa26.36■■□□□ 1.81
PTBP1-219ENST00000621737 GNAT3A8MTJ3 354 aa26.35■■□□□ 1.81
PTBP1-219ENST00000621737 UBR2Q8IWV8 1755 aa26.35■■□□□ 1.81
PTBP1-219ENST00000621737 C4AP0C0L4 1744 aa26.34■■□□□ 1.81
PTBP1-219ENST00000621737 RPS6KA4O75676 772 aa26.34■■□□□ 1.81
PTBP1-219ENST00000621737 U2AF1L5P0DN76 240 aaPredicted RBP26.34■■□□□ 1.81
PTBP1-219ENST00000621737 U2AF1Q01081 240 aaKnown RBP eCLIP26.34■■□□□ 1.819e-17■■□□□ 14.4
PTBP1-219ENST00000621737 TRAPPC3LQ5T215 181 aa26.34■■□□□ 1.81
PTBP1-219ENST00000621737 NLGN2Q8NFZ4 835 aa26.34■■□□□ 1.81
PTBP1-219ENST00000621737 SIPA1L3O60292 1781 aaPredicted RBP26.33■■□□□ 1.81
PTBP1-219ENST00000621737 CRKLP46109 303 aaKnown RBP26.33■■□□□ 1.81
PTBP1-219ENST00000621737 PHACTR3Q96KR7 559 aa26.33■■□□□ 1.81
PTBP1-219ENST00000621737 UTRNP46939 3433 aa26.33■■□□□ 1.8
PTBP1-219ENST00000621737 YY1P25490 414 aa26.32■■□□□ 1.8
PTBP1-219ENST00000621737 SLC39A6Q13433 755 aa26.32■■□□□ 1.8
PTBP1-219ENST00000621737 CD2APQ9Y5K6 639 aa26.31■■□□□ 1.8
PTBP1-219ENST00000621737 FCHSD2O94868 740 aa26.3■■□□□ 1.8
PTBP1-219ENST00000621737 TEFQ10587 303 aa26.3■■□□□ 1.8
PTBP1-219ENST00000621737 IL17REQ8NFR9 667 aa26.3■■□□□ 1.8
PTBP1-219ENST00000621737 ARHGEF1Q92888 912 aaKnown RBP26.3■■□□□ 1.8
PTBP1-219ENST00000621737 CEMIPQ8WUJ3 1361 aa26.29■■□□□ 1.8
PTBP1-219ENST00000621737 GPR162Q16538 588 aa26.28■■□□□ 1.8
PTBP1-219ENST00000621737 DNAJC10Q8IXB1 793 aa26.28■■□□□ 1.8
PTBP1-219ENST00000621737 RFC4P35249 363 aa26.27■■□□□ 1.8
PTBP1-219ENST00000621737 GOLGB1Q14789 3259 aaKnown RBP26.26■■□□□ 1.79
PTBP1-219ENST00000621737 INTS5Q6P9B9 1019 aaKnown RBP26.26■■□□□ 1.79
PTBP1-219ENST00000621737 TTC5Q8N0Z6 440 aa26.26■■□□□ 1.79
PTBP1-219ENST00000621737 VSIG10Q8N0Z9 540 aa26.26■■□□□ 1.79
PTBP1-219ENST00000621737 NLGN1Q8N2Q7 840 aa26.26■■□□□ 1.79
PTBP1-219ENST00000621737 MMP10P09238 476 aa26.25■■□□□ 1.79
PTBP1-219ENST00000621737 CCDC87Q9NVE4 849 aa26.25■■□□□ 1.79
PTBP1-219ENST00000621737 CHD4Q14839 1912 aa26.25■■□□□ 1.79
PTBP1-219ENST00000621737 CYP19A1P11511 503 aaPredicted RBP26.24■■□□□ 1.79
PTBP1-219ENST00000621737 GYS1P13807 737 aa26.24■■□□□ 1.79
PTBP1-219ENST00000621737 PELP1Q8IZL8 1130 aaKnown RBP26.23■■□□□ 1.79
PTBP1-219ENST00000621737 USP42Q9H9J4 1324 aaKnown RBP26.22■■□□□ 1.79
PTBP1-219ENST00000621737 DDX10Q13206 875 aaKnown RBP26.22■■□□□ 1.79
PTBP1-219ENST00000621737 RALBP1Q15311 655 aa26.22■■□□□ 1.79
PTBP1-219ENST00000621737 ZNF790Q6PG37 636 aa26.22■■□□□ 1.79
PTBP1-219ENST00000621737 KIF13BQ9NQT8 1826 aa26.21■■□□□ 1.79
PTBP1-219ENST00000621737 SOS1Q07889 1333 aaPredicted RBP26.2■■□□□ 1.79
PTBP1-219ENST00000621737 RTF1Q92541 710 aaKnown RBP26.2■■□□□ 1.78
PTBP1-219ENST00000621737 HEG1Q9ULI3 1381 aa26.2■■□□□ 1.78
PTBP1-219ENST00000621737 ZNF496Q96IT1 587 aaPredicted RBP26.19■■□□□ 1.78
PTBP1-219ENST00000621737 HTATSF1O43719 755 aaKnown RBP26.18■■□□□ 1.78
PTBP1-219ENST00000621737 YBX3P16989 372 aaKnown RBP eCLIP26.18■■□□□ 1.782e-18■□□□□ 10.5
PTBP1-219ENST00000621737 C10orf71Q711Q0 1435 aa26.18■■□□□ 1.78
PTBP1-219ENST00000621737 SRP68Q9UHB9 627 aaKnown RBP26.18■■□□□ 1.78
PTBP1-219ENST00000621737 ZBTB1Q9Y2K1 713 aa26.18■■□□□ 1.78
PTBP1-219ENST00000621737 NEFMP07197 916 aa26.17■■□□□ 1.78
PTBP1-219ENST00000621737 COL15A1P39059 1388 aa26.17■■□□□ 1.78
PTBP1-219ENST00000621737 BTBD11A6QL63 1104 aa26.16■■□□□ 1.78
PTBP1-219ENST00000621737 GRIN3BO60391 1043 aa26.16■■□□□ 1.78
PTBP1-219ENST00000621737 STARD3NLO95772 234 aa26.16■■□□□ 1.78
PTBP1-219ENST00000621737 MCM10Q7L590 875 aa26.16■■□□□ 1.78
PTBP1-219ENST00000621737 KIAA1551Q9HCM1 1747 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms