RNA–Protein interactions for RNA: ENST00000620828.4

FMR1-217, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best)

Gene FMR1, Length 4,830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-217ENST00000620828 LINC00116Q8NCU8 138 aa7.74□□□□□ -1.17
FMR1-217ENST00000620828 PHACTR3Q96KR7 559 aa7.74□□□□□ -1.17
FMR1-217ENST00000620828 NUP98P52948 1817 aa7.74□□□□□ -1.17
FMR1-217ENST00000620828 CC2D1BQ5T0F9 858 aaKnown RBP7.73□□□□□ -1.17
FMR1-217ENST00000620828 DIAPH1O60610 1272 aaKnown RBP7.73□□□□□ -1.17
FMR1-217ENST00000620828 SULT6B1Q6IMI4 303 aa7.73□□□□□ -1.17
FMR1-217ENST00000620828 R3HDM1Q15032 1099 aaKnown RBP7.73□□□□□ -1.17
FMR1-217ENST00000620828 IL17REQ8NFR9 667 aa7.73□□□□□ -1.17
FMR1-217ENST00000620828 RNMTO43148 476 aaKnown RBP7.72□□□□□ -1.17
FMR1-217ENST00000620828 SF3B2Q13435 895 aaKnown RBP7.72□□□□□ -1.17
FMR1-217ENST00000620828 RC3H1Q5TC82 1133 aaKnown RBP7.72□□□□□ -1.17
FMR1-217ENST00000620828 DDX54Q8TDD1 881 aaKnown RBP7.72□□□□□ -1.17
FMR1-217ENST00000620828 SLC52A2Q9HAB3 445 aa7.72□□□□□ -1.17
FMR1-217ENST00000620828 RALBP1Q15311 655 aa7.72□□□□□ -1.17
FMR1-217ENST00000620828 ASAP1Q9ULH1 1129 aa7.72□□□□□ -1.17
FMR1-217ENST00000620828 PLEKHO1Q53GL0 409 aaPredicted RBP7.72□□□□□ -1.17
FMR1-217ENST00000620828 LGR6Q9HBX8 967 aa7.72□□□□□ -1.17
FMR1-217ENST00000620828 SBF1O95248 1867 aa7.71□□□□□ -1.17
FMR1-217ENST00000620828 FCHSD2O94868 740 aa7.71□□□□□ -1.17
FMR1-217ENST00000620828 TNNT2P45379 298 aaPredicted RBP7.71□□□□□ -1.17
FMR1-217ENST00000620828 C10orf71Q711Q0 1435 aa7.71□□□□□ -1.17
FMR1-217ENST00000620828 HTATSF1O43719 755 aaKnown RBP7.71□□□□□ -1.18
FMR1-217ENST00000620828 INTS5Q6P9B9 1019 aaKnown RBP7.71□□□□□ -1.18
FMR1-217ENST00000620828 DDX60Q8IY21 1712 aaKnown RBP7.71□□□□□ -1.18
FMR1-217ENST00000620828 ZNF646O15015 1829 aaPredicted RBP7.71□□□□□ -1.18
FMR1-217ENST00000620828 PSDA5PKW4 1024 aaPredicted RBP7.71□□□□□ -1.18
FMR1-217ENST00000620828 HSP90AB1P08238 724 aaKnown RBP7.7□□□□□ -1.18
FMR1-217ENST00000620828 MYBBP1AQ9BQG0 1328 aaKnown RBP7.7□□□□□ -1.18
FMR1-217ENST00000620828 TNRC6CQ9HCJ0 1690 aaKnown RBP7.7□□□□□ -1.18
FMR1-217ENST00000620828 COL23A1Q86Y22 540 aaPredicted RBP7.7□□□□□ -1.18
FMR1-217ENST00000620828 VSIG10Q8N0Z9 540 aa7.7□□□□□ -1.18
FMR1-217ENST00000620828 LRRC37AA6NMS7 1700 aa7.7□□□□□ -1.18
FMR1-217ENST00000620828 SMARCC1Q92922 1105 aaPredicted RBP7.7□□□□□ -1.18
FMR1-217ENST00000620828 PRKRIP1Q9H875 184 aaPredicted RBP7.7□□□□□ -1.18
FMR1-217ENST00000620828 NCBP3Q53F19 620 aaKnown RBP7.69□□□□□ -1.18
FMR1-217ENST00000620828 SLC16A10Q8TF71 515 aa7.69□□□□□ -1.18
FMR1-217ENST00000620828 DICER1Q9UPY3 1922 aaKnown RBP7.69□□□□□ -1.18
FMR1-217ENST00000620828 UTRNP46939 3433 aa7.69□□□□□ -1.18
FMR1-217ENST00000620828 PXDNLA1KZ92 1463 aa7.69□□□□□ -1.18
FMR1-217ENST00000620828 FER1L6Q2WGJ9 1857 aa7.69□□□□□ -1.18
FMR1-217ENST00000620828 LOC102724428A0A0B4J2F2 783 aa7.69□□□□□ -1.18
FMR1-217ENST00000620828 SIK1P57059 783 aa7.69□□□□□ -1.18
FMR1-217ENST00000620828 LRP10Q7Z4F1 713 aa7.69□□□□□ -1.18
FMR1-217ENST00000620828 LTBP1Q14766 1721 aa7.69□□□□□ -1.18
FMR1-217ENST00000620828 MTFR1LQ9H019 292 aa7.69□□□□□ -1.18
FMR1-217ENST00000620828 A0A0G2JS52 829 aa7.69□□□□□ -1.18
FMR1-217ENST00000620828 SSFA2P28290 1259 aa7.68□□□□□ -1.18
FMR1-217ENST00000620828 ZEB1P37275 1124 aaPredicted RBP7.68□□□□□ -1.18
FMR1-217ENST00000620828 ZNF530Q6P9A1 599 aaPredicted RBP7.68□□□□□ -1.18
FMR1-217ENST00000620828 CACNA1FO60840 1977 aa7.68□□□□□ -1.18
FMR1-217ENST00000620828 NBPF14Q5TI25 921 aa7.68□□□□□ -1.18
FMR1-217ENST00000620828 CCNL1Q9UK58 526 aaPredicted RBP7.68□□□□□ -1.18
FMR1-217ENST00000620828 SNED1Q8TER0 1413 aa7.67□□□□□ -1.18
FMR1-217ENST00000620828 A0A1B0GUL6 1792 aa7.67□□□□□ -1.18
FMR1-217ENST00000620828 SOS1Q07889 1333 aaPredicted RBP7.67□□□□□ -1.18
FMR1-217ENST00000620828 CYP19A1P11511 503 aaPredicted RBP7.67□□□□□ -1.18
FMR1-217ENST00000620828 KCNQ4P56696 695 aa7.67□□□□□ -1.18
FMR1-217ENST00000620828 PPM1GO15355 546 aaPredicted RBP7.67□□□□□ -1.18
FMR1-217ENST00000620828 HMOX1P09601 288 aa7.67□□□□□ -1.18
FMR1-217ENST00000620828 RGL2O15211 777 aa7.67□□□□□ -1.18
FMR1-217ENST00000620828 NFATC2IPQ8NCF5 419 aa7.67□□□□□ -1.18
FMR1-217ENST00000620828 MPRIPQ6WCQ1 1025 aa7.67□□□□□ -1.18
FMR1-217ENST00000620828 TMOD3Q9NYL9 352 aa7.67□□□□□ -1.18
FMR1-217ENST00000620828 STK32BQ9NY57 414 aa7.66□□□□□ -1.18
FMR1-217ENST00000620828 BCL2L12Q9HB09 334 aa7.66□□□□□ -1.18
FMR1-217ENST00000620828 GNAT3A8MTJ3 354 aa7.66□□□□□ -1.18
FMR1-217ENST00000620828 PRKAR2BP31323 418 aa7.66□□□□□ -1.18
FMR1-217ENST00000620828 TRIM35Q9UPQ4 493 aa7.66□□□□□ -1.18
FMR1-217ENST00000620828 RIC1Q4ADV7 1423 aa7.66□□□□□ -1.18
FMR1-217ENST00000620828 ADRA2BP18089 450 aa7.66□□□□□ -1.18
FMR1-217ENST00000620828 GAS2L2Q8NHY3 880 aa7.66□□□□□ -1.18
FMR1-217ENST00000620828 ADCY9O60503 1353 aa7.65□□□□□ -1.18
FMR1-217ENST00000620828 ZNF853P0CG23 659 aa7.65□□□□□ -1.18
FMR1-217ENST00000620828 POLR3GLQ9BT43 218 aa7.65□□□□□ -1.18
FMR1-217ENST00000620828 TM4SF1P30408 202 aa7.65□□□□□ -1.18
FMR1-217ENST00000620828 TIAM2Q8IVF5 1701 aa7.65□□□□□ -1.19
FMR1-217ENST00000620828 RPS6KA4O75676 772 aa7.65□□□□□ -1.19
FMR1-217ENST00000620828 BABAM1Q9NWV8 329 aa7.65□□□□□ -1.19
FMR1-217ENST00000620828 CCDC184Q52MB2 194 aa7.64□□□□□ -1.19
FMR1-217ENST00000620828 KAT6BQ8WYB5 2073 aa7.64□□□□□ -1.19
FMR1-217ENST00000620828 GOLGB1Q14789 3259 aaKnown RBP7.64□□□□□ -1.19
FMR1-217ENST00000620828 CACNA1SQ13698 1873 aa7.64□□□□□ -1.19
FMR1-217ENST00000620828 COL4A1P02462 1669 aa7.64□□□□□ -1.19
FMR1-217ENST00000620828 SPON1Q9HCB6 807 aa7.64□□□□□ -1.19
FMR1-217ENST00000620828 USP42Q9H9J4 1324 aaKnown RBP7.64□□□□□ -1.19
FMR1-217ENST00000620828 HMGB2P26583 209 aaKnown RBP7.64□□□□□ -1.19
FMR1-217ENST00000620828 NFE2L2Q16236 605 aa7.64□□□□□ -1.19
FMR1-217ENST00000620828 EIF5P55010 431 aaKnown RBP7.63□□□□□ -1.19
FMR1-217ENST00000620828 ZNF790Q6PG37 636 aa7.63□□□□□ -1.19
FMR1-217ENST00000620828 FLAD1Q8NFF5 587 aa7.63□□□□□ -1.19
FMR1-217ENST00000620828 KCNQ3O43525 872 aa7.63□□□□□ -1.19
FMR1-217ENST00000620828 GYS1P13807 737 aa7.63□□□□□ -1.19
FMR1-217ENST00000620828 DDX10Q13206 875 aaKnown RBP7.63□□□□□ -1.19
FMR1-217ENST00000620828 KCNA3P22001 575 aa7.63□□□□□ -1.19
FMR1-217ENST00000620828 CRKLP46109 303 aaKnown RBP7.63□□□□□ -1.19
FMR1-217ENST00000620828 CABP4P57796 275 aa7.62□□□□□ -1.19
FMR1-217ENST00000620828 PDIA6Q15084 440 aa7.62□□□□□ -1.19
FMR1-217ENST00000620828 SMIM5Q71RC9 77 aa7.62□□□□□ -1.19
FMR1-217ENST00000620828 C1orf141Q5JVX7 400 aa7.62□□□□□ -1.19
FMR1-217ENST00000620828 PNISRQ8TF01 805 aaKnown RBP7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms