RNA–Protein interactions for RNA: ENST00000619655.4

MMP28-207, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 2,336 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-207ENST00000619655 EIF4A1P60842 406 aaKnown RBP25.36■■□□□ 1.65
MMP28-207ENST00000619655 FLIIQ13045 1269 aa25.36■■□□□ 1.65
MMP28-207ENST00000619655 SIRT2Q8IXJ6 389 aa25.36■■□□□ 1.65
MMP28-207ENST00000619655 IPO9Q96P70 1041 aaKnown RBP25.36■■□□□ 1.65
MMP28-207ENST00000619655 SOS2Q07890 1332 aaPredicted RBP25.36■■□□□ 1.65
MMP28-207ENST00000619655 TATP17735 454 aaPredicted RBP25.36■■□□□ 1.65
MMP28-207ENST00000619655 ERICH6Q7L0X2 663 aa25.35■■□□□ 1.65
MMP28-207ENST00000619655 PRDM11Q9NQV5 511 aa25.35■■□□□ 1.65
MMP28-207ENST00000619655 KDM3BQ7LBC6 1761 aa25.34■■□□□ 1.65
MMP28-207ENST00000619655 MEIS3Q99687 375 aa25.34■■□□□ 1.65
MMP28-207ENST00000619655 LNPKQ9C0E8 428 aa25.34■■□□□ 1.65
MMP28-207ENST00000619655 MEGF6O75095 1541 aa25.34■■□□□ 1.65
MMP28-207ENST00000619655 CPDO75976 1380 aa25.33■■□□□ 1.65
MMP28-207ENST00000619655 SOS1Q07889 1333 aaPredicted RBP25.32■■□□□ 1.64
MMP28-207ENST00000619655 NUCB1Q02818 461 aa25.31■■□□□ 1.64
MMP28-207ENST00000619655 ANKRD45Q5TZF3 282 aa25.31■■□□□ 1.64
MMP28-207ENST00000619655 BCL11AQ9H165 835 aa25.31■■□□□ 1.64
MMP28-207ENST00000619655 SPG7Q9UQ90 795 aa25.31■■□□□ 1.64
MMP28-207ENST00000619655 PHAXQ9H814 394 aaKnown RBP25.3■■□□□ 1.64
MMP28-207ENST00000619655 CCT4P50991 539 aaKnown RBP25.3■■□□□ 1.64
MMP28-207ENST00000619655 CHD1LQ86WJ1 897 aa25.3■■□□□ 1.64
MMP28-207ENST00000619655 GCC1Q96CN9 775 aa25.3■■□□□ 1.64
MMP28-207ENST00000619655 CHPF2Q9P2E5 772 aa25.28■■□□□ 1.64
MMP28-207ENST00000619655 NOP58Q9Y2X3 529 aaKnown RBP25.28■■□□□ 1.64
MMP28-207ENST00000619655 CACNA1FO60840 1977 aa25.27■■□□□ 1.64
MMP28-207ENST00000619655 ABCC6O95255 1503 aa25.27■■□□□ 1.64
MMP28-207ENST00000619655 PHKG2P15735 406 aa25.27■■□□□ 1.64
MMP28-207ENST00000619655 OVOS2A0A0G2JMS6 1433 aa25.27■■□□□ 1.64
MMP28-207ENST00000619655 SEC24BO95487 1268 aa25.26■■□□□ 1.63
MMP28-207ENST00000619655 ANXA1P04083 346 aa25.26■■□□□ 1.63
MMP28-207ENST00000619655 TOM1L2Q6ZVM7 507 aa25.26■■□□□ 1.63
MMP28-207ENST00000619655 ZBTB47Q9UFB7 747 aaPredicted RBP25.26■■□□□ 1.63
MMP28-207ENST00000619655 ATP10DQ9P241 1426 aa25.25■■□□□ 1.63
MMP28-207ENST00000619655 CEP85Q6P2H3 762 aa25.25■■□□□ 1.63
MMP28-207ENST00000619655 IFNL2Q8IZJ0 200 aa25.25■■□□□ 1.63
MMP28-207ENST00000619655 KDM6AO15550 1401 aaPredicted RBP25.24■■□□□ 1.63
MMP28-207ENST00000619655 PRAMEF22A3QJZ6 481 aa25.24■■□□□ 1.63
MMP28-207ENST00000619655 HOXB7P09629 217 aa25.24■■□□□ 1.63
MMP28-207ENST00000619655 ANKRD44Q8N8A2 993 aa25.24■■□□□ 1.63
MMP28-207ENST00000619655 SLC39A6Q13433 755 aa25.24■■□□□ 1.63
MMP28-207ENST00000619655 STRN4Q9NRL3 753 aa25.24■■□□□ 1.63
MMP28-207ENST00000619655 NFATC2IPQ8NCF5 419 aa25.23■■□□□ 1.63
MMP28-207ENST00000619655 SIPA1L3O60292 1781 aaPredicted RBP25.23■■□□□ 1.63
MMP28-207ENST00000619655 NHSL1Q5SYE7 1610 aa25.23■■□□□ 1.63
MMP28-207ENST00000619655 WDR17Q8IZU2 1322 aa25.22■■□□□ 1.63
MMP28-207ENST00000619655 ABCA3Q99758 1704 aa25.22■■□□□ 1.63
MMP28-207ENST00000619655 CYP27B1O15528 508 aa25.22■■□□□ 1.63
MMP28-207ENST00000619655 RPAP2Q8IXW5 612 aaPredicted RBP25.22■■□□□ 1.63
MMP28-207ENST00000619655 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.22■■□□□ 1.63
MMP28-207ENST00000619655 SLC52A2Q9HAB3 445 aa25.21■■□□□ 1.63
MMP28-207ENST00000619655 SCN11AQ9UI33 1791 aa25.21■■□□□ 1.63
MMP28-207ENST00000619655 GIGYF1O75420 1035 aaPredicted RBP25.21■■□□□ 1.63
MMP28-207ENST00000619655 ADAMTS7Q9UKP4 1686 aa25.2■■□□□ 1.63
MMP28-207ENST00000619655 APBB1O00213 710 aa25.2■■□□□ 1.63
MMP28-207ENST00000619655 COL5A2P05997 1499 aaPredicted RBP25.2■■□□□ 1.62
MMP28-207ENST00000619655 DCTPP1Q9H773 170 aa25.19■■□□□ 1.62
MMP28-207ENST00000619655 EVA1CP58658 441 aa25.18■■□□□ 1.62
MMP28-207ENST00000619655 ZNF790Q6PG37 636 aa25.18■■□□□ 1.62
MMP28-207ENST00000619655 CHMP4AQ9BY43 222 aa25.18■■□□□ 1.62
MMP28-207ENST00000619655 GNAI2P04899 355 aa25.18■■□□□ 1.62
MMP28-207ENST00000619655 DCAF5Q96JK2 942 aa25.17■■□□□ 1.62
MMP28-207ENST00000619655 DBF4Q9UBU7 674 aaPredicted RBP25.17■■□□□ 1.62
MMP28-207ENST00000619655 PKD1L3Q7Z443 1732 aa25.17■■□□□ 1.62
MMP28-207ENST00000619655 PI4KAP2A4QPH2 592 aa25.16■■□□□ 1.62
MMP28-207ENST00000619655 PROSER3Q2NL68 480 aa25.16■■□□□ 1.62
MMP28-207ENST00000619655 PI4KAP1Q8N8J0 262 aa25.16■■□□□ 1.62
MMP28-207ENST00000619655 USP35Q9P2H5 1018 aa25.16■■□□□ 1.62
MMP28-207ENST00000619655 LARP1Q6PKG0 1096 aaKnown RBP25.15■■□□□ 1.62
MMP28-207ENST00000619655 DDRGK1Q96HY6 314 aa25.15■■□□□ 1.62
MMP28-207ENST00000619655 GNAI3P08754 354 aa25.15■■□□□ 1.62
MMP28-207ENST00000619655 HEG1Q9ULI3 1381 aa25.15■■□□□ 1.62
MMP28-207ENST00000619655 PXDNLA1KZ92 1463 aa25.14■■□□□ 1.62
MMP28-207ENST00000619655 HMMRO75330 724 aa25.13■■□□□ 1.61
MMP28-207ENST00000619655 SRCIN1Q9C0H9 1055 aa25.13■■□□□ 1.61
MMP28-207ENST00000619655 CABP4P57796 275 aa25.13■■□□□ 1.61
MMP28-207ENST00000619655 ZCRB1Q8TBF4 217 aaKnown RBP25.13■■□□□ 1.61
MMP28-207ENST00000619655 DNAAF4Q8WXU2 420 aa25.13■■□□□ 1.61
MMP28-207ENST00000619655 UPF2Q9HAU5 1272 aaKnown RBP25.13■■□□□ 1.61
MMP28-207ENST00000619655 LRRFIP2Q9Y608 721 aaKnown RBP25.13■■□□□ 1.61
MMP28-207ENST00000619655 PARP4Q9UKK3 1724 aaKnown RBP25.12■■□□□ 1.61
MMP28-207ENST00000619655 HSP90AB1P08238 724 aaKnown RBP25.12■■□□□ 1.61
MMP28-207ENST00000619655 TTC5Q8N0Z6 440 aa25.12■■□□□ 1.61
MMP28-207ENST00000619655 USP44Q9H0E7 712 aa25.12■■□□□ 1.61
MMP28-207ENST00000619655 ROBO1Q9Y6N7 1651 aa25.12■■□□□ 1.61
MMP28-207ENST00000619655 SMARCA5O60264 1052 aaPredicted RBP25.12■■□□□ 1.61
MMP28-207ENST00000619655 N4BP2Q86UW6 1770 aaPredicted RBP25.11■■□□□ 1.61
MMP28-207ENST00000619655 UBTFL1P0CB47 393 aaPredicted RBP25.11■■□□□ 1.61
MMP28-207ENST00000619655 IL2RBP14784 551 aa25.11■■□□□ 1.61
MMP28-207ENST00000619655 C16orf71Q8IYS4 520 aaPredicted RBP25.11■■□□□ 1.61
MMP28-207ENST00000619655 ZNF496Q96IT1 587 aaPredicted RBP25.11■■□□□ 1.61
MMP28-207ENST00000619655 PCDH11XQ9BZA7 1347 aa25.1■■□□□ 1.61
MMP28-207ENST00000619655 PCDH11YQ9BZA8 1340 aa25.1■■□□□ 1.61
MMP28-207ENST00000619655 AIMP1Q12904 312 aaKnown RBP25.1■■□□□ 1.61
MMP28-207ENST00000619655 DDX54Q8TDD1 881 aaKnown RBP25.1■■□□□ 1.61
MMP28-207ENST00000619655 CARD10Q9BWT7 1032 aa25.1■■□□□ 1.61
MMP28-207ENST00000619655 ADCY9O60503 1353 aa25.09■■□□□ 1.61
MMP28-207ENST00000619655 SLC4A3P48751 1232 aa25.09■■□□□ 1.61
MMP28-207ENST00000619655 MFAP1P55081 439 aaKnown RBP25.09■■□□□ 1.61
MMP28-207ENST00000619655 BTG4Q9NY30 223 aa25.09■■□□□ 1.61
MMP28-207ENST00000619655 C5P01031 1676 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms