RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 AEBP1Q8IUX7 1158 aa15.28■□□□□ 0.04
TARDBP-221ENST00000619555 KNSTRNQ9Y448 316 aa15.27■□□□□ 0.04
TARDBP-221ENST00000619555 CD2APQ9Y5K6 639 aa15.27■□□□□ 0.04
TARDBP-221ENST00000619555 ERVV-2B6SEH9 535 aa15.26■□□□□ 0.03
TARDBP-221ENST00000619555 GNPATO15228 680 aa15.26■□□□□ 0.03
TARDBP-221ENST00000619555 SSFA2P28290 1259 aa15.26■□□□□ 0.03
TARDBP-221ENST00000619555 ZNF530Q6P9A1 599 aaPredicted RBP15.26■□□□□ 0.03
TARDBP-221ENST00000619555 SLC4A9Q96Q91 983 aa15.26■□□□□ 0.03
TARDBP-221ENST00000619555 PLEKHG2Q9H7P9 1386 aa15.25■□□□□ 0.03
TARDBP-221ENST00000619555 GRIN3BO60391 1043 aa15.25■□□□□ 0.03
TARDBP-221ENST00000619555 HSP90AB1P08238 724 aaKnown RBP15.25■□□□□ 0.03
TARDBP-221ENST00000619555 DCAF5Q96JK2 942 aa15.25■□□□□ 0.03
TARDBP-221ENST00000619555 AMOTQ4VCS5 1084 aa15.24■□□□□ 0.03
TARDBP-221ENST00000619555 AMER1Q5JTC6 1135 aaPredicted RBP15.24■□□□□ 0.03
TARDBP-221ENST00000619555 SULT6B1Q6IMI4 303 aa15.24■□□□□ 0.03
TARDBP-221ENST00000619555 RBM42Q9BTD8 480 aaKnown RBP15.24■□□□□ 0.03
TARDBP-221ENST00000619555 KDM6AO15550 1401 aaPredicted RBP15.24■□□□□ 0.03
TARDBP-221ENST00000619555 IL13P35225 146 aa15.23■□□□□ 0.03
TARDBP-221ENST00000619555 MTHFSP49914 203 aa15.23■□□□□ 0.03
TARDBP-221ENST00000619555 CABP4P57796 275 aa15.23■□□□□ 0.03
TARDBP-221ENST00000619555 KDRP35968 1356 aa15.23■□□□□ 0.03
TARDBP-221ENST00000619555 KIF7Q2M1P5 1343 aa15.22■□□□□ 0.03
TARDBP-221ENST00000619555 WWC3Q9ULE0 1092 aa15.22■□□□□ 0.03
TARDBP-221ENST00000619555 C1orf141Q5JVX7 400 aa15.21■□□□□ 0.03
TARDBP-221ENST00000619555 C1QTNF8P60827 252 aa15.2■□□□□ 0.02
TARDBP-221ENST00000619555 TRAPPC3LQ5T215 181 aa15.2■□□□□ 0.02
TARDBP-221ENST00000619555 NFATC2IPQ8NCF5 419 aa15.2■□□□□ 0.02
TARDBP-221ENST00000619555 RTCBQ9Y3I0 505 aaKnown RBP15.2■□□□□ 0.02
TARDBP-221ENST00000619555 MYH14Q7Z406 1995 aaKnown RBP15.19■□□□□ 0.02
TARDBP-221ENST00000619555 MMP10P09238 476 aa15.19■□□□□ 0.02
TARDBP-221ENST00000619555 RC3H1Q5TC82 1133 aaKnown RBP15.19■□□□□ 0.02
TARDBP-221ENST00000619555 ARHGEF1Q92888 912 aaKnown RBP15.19■□□□□ 0.02
TARDBP-221ENST00000619555 PTCD1O75127 700 aaKnown RBP15.18■□□□□ 0.02
TARDBP-221ENST00000619555 CNTNAP4Q9C0A0 1308 aa15.17■□□□□ 0.02
TARDBP-221ENST00000619555 ZNF831Q5JPB2 1677 aa15.17■□□□□ 0.02
TARDBP-221ENST00000619555 PER1O15534 1290 aaPredicted RBP15.17■□□□□ 0.02
TARDBP-221ENST00000619555 RPS6KA4O75676 772 aa15.17■□□□□ 0.02
TARDBP-221ENST00000619555 CC2D1BQ5T0F9 858 aaKnown RBP15.17■□□□□ 0.02
TARDBP-221ENST00000619555 COL5A3P25940 1745 aaPredicted RBP15.17■□□□□ 0.02
TARDBP-221ENST00000619555 GIGYF1O75420 1035 aaPredicted RBP15.16■□□□□ 0.02
TARDBP-221ENST00000619555 HMOX1P09601 288 aa15.16■□□□□ 0.02
TARDBP-221ENST00000619555 SENP3-EIF4A1A0A087X0R7 540 aa15.15■□□□□ 0.02
TARDBP-221ENST00000619555 GYS1P13807 737 aa15.15■□□□□ 0.02
TARDBP-221ENST00000619555 RFC4P35249 363 aa15.15■□□□□ 0.02
TARDBP-221ENST00000619555 AKAP4Q5JQC9 854 aa15.15■□□□□ 0.02
TARDBP-221ENST00000619555 NLGN1Q8N2Q7 840 aa15.15■□□□□ 0.02
TARDBP-221ENST00000619555 LGR6Q9HBX8 967 aa15.15■□□□□ 0.02
TARDBP-221ENST00000619555 ATP10DQ9P241 1426 aa15.15■□□□□ 0.02
TARDBP-221ENST00000619555 SCN11AQ9UI33 1791 aa15.14■□□□□ 0.01
TARDBP-221ENST00000619555 CRKLP46109 303 aaKnown RBP15.14■□□□□ 0.01
TARDBP-221ENST00000619555 CNGB1Q14028 1251 aaPredicted RBP15.14■□□□□ 0.01
TARDBP-221ENST00000619555 CICQ96RK0 1608 aaPredicted RBP15.13■□□□□ 0.01
TARDBP-221ENST00000619555 A0A0G2JLW4 131 aa15.12■□□□□ 0.01
TARDBP-221ENST00000619555 RNMTO43148 476 aaKnown RBP15.12■□□□□ 0.01
TARDBP-221ENST00000619555 DIAPH1O60610 1272 aaKnown RBP15.12■□□□□ 0.01
TARDBP-221ENST00000619555 MTHFSDQ2M296 383 aaKnown RBP15.12■□□□□ 0.01
TARDBP-221ENST00000619555 SLC52A2Q9HAB3 445 aa15.12■□□□□ 0.01
TARDBP-221ENST00000619555 SRP68Q9UHB9 627 aaKnown RBP15.12■□□□□ 0.01
TARDBP-221ENST00000619555 KIF13BQ9NQT8 1826 aa15.11■□□□□ 0.01
TARDBP-221ENST00000619555 SLC39A6Q13433 755 aa15.11■□□□□ 0.01
TARDBP-221ENST00000619555 INTS5Q6P9B9 1019 aaKnown RBP15.11■□□□□ 0.01
TARDBP-221ENST00000619555 DNAJC10Q8IXB1 793 aa15.11■□□□□ 0.01
TARDBP-221ENST00000619555 PARP3Q9Y6F1 533 aa15.11■□□□□ 0.01
TARDBP-221ENST00000619555 PXDNLA1KZ92 1463 aa15.11■□□□□ 0.01
TARDBP-221ENST00000619555 TJP1Q07157 1748 aa15.11■□□□□ 0.01
TARDBP-221ENST00000619555 N4BP2Q86UW6 1770 aaPredicted RBP15.11■□□□□ 0.01
TARDBP-221ENST00000619555 C4AP0C0L4 1744 aa15.1■□□□□ 0.01
TARDBP-221ENST00000619555 KIAA1551Q9HCM1 1747 aa15.1■□□□□ 0.01
TARDBP-221ENST00000619555 DPEP1P16444 411 aa15.1■□□□□ 0.01
TARDBP-221ENST00000619555 TGFB2P61812 414 aa15.1■□□□□ 0.01
TARDBP-221ENST00000619555 FKBP8Q14318 412 aa15.1■□□□□ 0.01
TARDBP-221ENST00000619555 ZNF526Q8TF50 670 aaPredicted RBP15.1■□□□□ 0.01
TARDBP-221ENST00000619555 CCDC87Q9NVE4 849 aa15.1■□□□□ 0.01
TARDBP-221ENST00000619555 ADCY9O60503 1353 aa15.1■□□□□ 0.01
TARDBP-221ENST00000619555 C10orf71Q711Q0 1435 aa15.09■□□□□ 0.01
TARDBP-221ENST00000619555 VIRMAQ69YN4 1812 aaKnown RBP15.09■□□□□ 0.01
TARDBP-221ENST00000619555 GPBP1L1Q9HC44 474 aaPredicted RBP15.09■□□□□ 0.01
TARDBP-221ENST00000619555 BCS1LQ9Y276 419 aa15.09■□□□□ 0.01
TARDBP-221ENST00000619555 USP42Q9H9J4 1324 aaKnown RBP15.08■□□□□ 0
TARDBP-221ENST00000619555 U2SURPO15042 1029 aaKnown RBP15.07■□□□□ 0
TARDBP-221ENST00000619555 CYP19A1P11511 503 aaPredicted RBP15.07■□□□□ 0
TARDBP-221ENST00000619555 DDR1Q08345 913 aa15.07■□□□□ 0
TARDBP-221ENST00000619555 NPC1L1Q9UHC9 1359 aa15.07■□□□□ 0
TARDBP-221ENST00000619555 MRC1P22897 1456 aa15.07■□□□□ 0
TARDBP-221ENST00000619555 COL3A1P02461 1466 aaPredicted RBP15.06■□□□□ 0
TARDBP-221ENST00000619555 FCHSD2O94868 740 aa15.05■□□□□ -0
TARDBP-221ENST00000619555 KCNA3P22001 575 aa15.05■□□□□ -0
TARDBP-221ENST00000619555 USPL1Q5W0Q7 1092 aa15.05■□□□□ -0
TARDBP-221ENST00000619555 ARHGAP27Q6ZUM4 889 aa15.05■□□□□ -0
TARDBP-221ENST00000619555 SOS1Q07889 1333 aaPredicted RBP15.05■□□□□ -0
TARDBP-221ENST00000619555 KCPQ6ZWJ8 1503 aa15.05■□□□□ -0
TARDBP-221ENST00000619555 ADAMTS7Q9UKP4 1686 aa15.04■□□□□ -0
TARDBP-221ENST00000619555 ZPR1O75312 459 aa15.04■□□□□ -0
TARDBP-221ENST00000619555 TM4SF1P30408 202 aa15.04■□□□□ -0
TARDBP-221ENST00000619555 ZBTB1Q9Y2K1 713 aa15.04■□□□□ -0
TARDBP-221ENST00000619555 CEP350Q5VT06 3117 aa15.03■□□□□ -0
TARDBP-221ENST00000619555 POLRMTO00411 1230 aaKnown RBP15.03■□□□□ -0
TARDBP-221ENST00000619555 IL17REQ8NFR9 667 aa15.03■□□□□ -0
TARDBP-221ENST00000619555 BRCA1P38398 1863 aaKnown RBP15.03■□□□□ -0
TARDBP-221ENST00000619555 CHRNA5P30532 468 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms