RNA–Protein interactions for RNA: ENST00000619348.4

CYFIP1-211, Transcript of cytoplasmic FMR1 interacting protein 1, humanhuman

TSL 1 (best)

Gene CYFIP1, Length 3,471 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYFIP1-211ENST00000619348 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.85■□□□□ 0.13
CYFIP1-211ENST00000619348 FILIP1Q7Z7B0 1213 aa15.85■□□□□ 0.13
CYFIP1-211ENST00000619348 CCDC112Q8NEF3 446 aa15.85■□□□□ 0.13
CYFIP1-211ENST00000619348 JAKMIP1Q96N16 626 aaKnown RBP15.85■□□□□ 0.13
CYFIP1-211ENST00000619348 RAPGEF3O95398 923 aa15.85■□□□□ 0.13
CYFIP1-211ENST00000619348 DMTNQ08495 405 aa15.85■□□□□ 0.13
CYFIP1-211ENST00000619348 LUZP1Q86V48 1076 aa15.85■□□□□ 0.13
CYFIP1-211ENST00000619348 LRRFIP2Q9Y608 721 aaKnown RBP15.85■□□□□ 0.13
CYFIP1-211ENST00000619348 PLXNC1O60486 1568 aa15.85■□□□□ 0.13
CYFIP1-211ENST00000619348 IQSEC2Q5JU85 1478 aa15.85■□□□□ 0.13
CYFIP1-211ENST00000619348 VIRMAQ69YN4 1812 aaKnown RBP15.84■□□□□ 0.13
CYFIP1-211ENST00000619348 GOLGA6L19H0YKK7 550 aa15.84■□□□□ 0.13
CYFIP1-211ENST00000619348 TNNT1P13805 278 aa15.84■□□□□ 0.13
CYFIP1-211ENST00000619348 SYT1P21579 422 aa15.84■□□□□ 0.13
CYFIP1-211ENST00000619348 UBTFL1P0CB47 393 aaPredicted RBP15.84■□□□□ 0.13
CYFIP1-211ENST00000619348 ZSCAN22P10073 491 aaPredicted RBP15.84■□□□□ 0.13
CYFIP1-211ENST00000619348 CHMLP26374 656 aa15.84■□□□□ 0.13
CYFIP1-211ENST00000619348 UBE2HP62256 183 aa15.84■□□□□ 0.13
CYFIP1-211ENST00000619348 LRMPQ12912 555 aa15.84■□□□□ 0.13
CYFIP1-211ENST00000619348 ZRSR1Q15695 479 aaKnown RBP15.84■□□□□ 0.13
CYFIP1-211ENST00000619348 UNC5CLQ8IV45 518 aa15.84■□□□□ 0.13
CYFIP1-211ENST00000619348 TRMT1Q9NXH9 659 aaKnown RBP15.84■□□□□ 0.13
CYFIP1-211ENST00000619348 LARP1BQ659C4 914 aaKnown RBP15.83■□□□□ 0.12
CYFIP1-211ENST00000619348 TNMDQ9H2S6 317 aa15.83■□□□□ 0.12
CYFIP1-211ENST00000619348 LAMC1P11047 1609 aa15.83■□□□□ 0.12
CYFIP1-211ENST00000619348 IQGAP3Q86VI3 1631 aa15.83■□□□□ 0.12
CYFIP1-211ENST00000619348 BECN2A8MW95 431 aa15.83■□□□□ 0.12
CYFIP1-211ENST00000619348 PPFIA3O75145 1194 aa15.83■□□□□ 0.12
CYFIP1-211ENST00000619348 FOXO3O43524 673 aa15.82■□□□□ 0.12
CYFIP1-211ENST00000619348 LETM1O95202 739 aaPredicted RBP15.82■□□□□ 0.12
CYFIP1-211ENST00000619348 GJB2P29033 226 aa15.82■□□□□ 0.12
CYFIP1-211ENST00000619348 NAA30Q147X3 362 aaPredicted RBP15.82■□□□□ 0.12
CYFIP1-211ENST00000619348 TXNDC2Q86VQ3 553 aa15.82■□□□□ 0.12
CYFIP1-211ENST00000619348 ZNF710Q8N1W2 664 aa15.82■□□□□ 0.12
CYFIP1-211ENST00000619348 CLTCL1P53675 1640 aa15.82■□□□□ 0.12
CYFIP1-211ENST00000619348 ZSCAN20P17040 1043 aaPredicted RBP15.82■□□□□ 0.12
CYFIP1-211ENST00000619348 PRPF40BQ6NWY9 871 aaKnown RBP15.82■□□□□ 0.12
CYFIP1-211ENST00000619348 NUP62CLQ9H1M0 184 aa15.82■□□□□ 0.12
CYFIP1-211ENST00000619348 PNMA6EA0A0J9YXQ4 647 aa15.82■□□□□ 0.12
CYFIP1-211ENST00000619348 AK2P54819 239 aa15.82■□□□□ 0.12
CYFIP1-211ENST00000619348 VGLL3A8MV65 326 aa15.81■□□□□ 0.12
CYFIP1-211ENST00000619348 HSP90B1P14625 803 aaKnown RBP15.81■□□□□ 0.12
CYFIP1-211ENST00000619348 UVSSAQ2YD98 709 aa15.81■□□□□ 0.12
CYFIP1-211ENST00000619348 CDC42BPBQ9Y5S2 1711 aa15.81■□□□□ 0.12
CYFIP1-211ENST00000619348 GORABQ5T7V8 394 aa15.81■□□□□ 0.12
CYFIP1-211ENST00000619348 UNC13BO14795 1591 aa15.8■□□□□ 0.12
CYFIP1-211ENST00000619348 MAP3K11Q16584 847 aa15.8■□□□□ 0.12
CYFIP1-211ENST00000619348 ZBTB9Q96C00 473 aa15.8■□□□□ 0.12
CYFIP1-211ENST00000619348 LIMCH1Q9UPQ0 1083 aa15.8■□□□□ 0.12
CYFIP1-211ENST00000619348 SBNO2Q9Y2G9 1366 aa15.8■□□□□ 0.12
CYFIP1-211ENST00000619348 SRGAP3O43295 1099 aa15.8■□□□□ 0.12
CYFIP1-211ENST00000619348 GNAI3P08754 354 aa15.8■□□□□ 0.12
CYFIP1-211ENST00000619348 CCT4P50991 539 aaKnown RBP15.8■□□□□ 0.12
CYFIP1-211ENST00000619348 FMNL2Q96PY5 1086 aa15.8■□□□□ 0.12
CYFIP1-211ENST00000619348 TRPM2O94759 1503 aa15.8■□□□□ 0.12
CYFIP1-211ENST00000619348 F13A1P00488 732 aa15.79■□□□□ 0.12
CYFIP1-211ENST00000619348 ZKSCAN1P17029 563 aaPredicted RBP15.79■□□□□ 0.12
CYFIP1-211ENST00000619348 PDRG1Q9NUG6 133 aa15.79■□□□□ 0.12
CYFIP1-211ENST00000619348 H3BQV1 296 aa15.79■□□□□ 0.12
CYFIP1-211ENST00000619348 IFFO2Q5TF58 517 aa15.79■□□□□ 0.12
CYFIP1-211ENST00000619348 PREX2Q70Z35 1606 aa15.78■□□□□ 0.12
CYFIP1-211ENST00000619348 AMPHP49418 695 aa15.78■□□□□ 0.12
CYFIP1-211ENST00000619348 KRT85P78386 507 aa15.78■□□□□ 0.12
CYFIP1-211ENST00000619348 NUTM2GQ5VZR2 741 aa15.78■□□□□ 0.12
CYFIP1-211ENST00000619348 NRBP1Q9UHY1 535 aa15.78■□□□□ 0.12
CYFIP1-211ENST00000619348 RTL1A6NKG5 1358 aa15.78■□□□□ 0.12
CYFIP1-211ENST00000619348 FBXO31Q5XUX0 539 aaPredicted RBP15.78■□□□□ 0.12
CYFIP1-211ENST00000619348 INTS4Q96HW7 963 aaKnown RBP15.78■□□□□ 0.12
CYFIP1-211ENST00000619348 GTPBP4Q9BZE4 634 aaKnown RBP15.78■□□□□ 0.12
CYFIP1-211ENST00000619348 ANO6Q4KMQ2 910 aa15.78■□□□□ 0.12
CYFIP1-211ENST00000619348 CNTROBQ8N137 903 aa15.78■□□□□ 0.12
CYFIP1-211ENST00000619348 DACT1Q9NYF0 836 aa15.78■□□□□ 0.12
CYFIP1-211ENST00000619348 IQGAP1P46940 1657 aa15.78■□□□□ 0.12
CYFIP1-211ENST00000619348 HSP90AB2PQ58FF8 381 aa15.77■□□□□ 0.12
CYFIP1-211ENST00000619348 SYTL4Q96C24 671 aaPredicted RBP15.77■□□□□ 0.12
CYFIP1-211ENST00000619348 RPGRIP1LQ68CZ1 1315 aa15.77■□□□□ 0.12
CYFIP1-211ENST00000619348 CYP46A1Q9Y6A2 500 aa15.77■□□□□ 0.12
CYFIP1-211ENST00000619348 IL13P35225 146 aa15.77■□□□□ 0.11
CYFIP1-211ENST00000619348 DDX11Q96FC9 970 aa15.77■□□□□ 0.11
CYFIP1-211ENST00000619348 SPATA32Q96LK8 384 aa15.77■□□□□ 0.11
CYFIP1-211ENST00000619348 CLIP2Q9UDT6 1046 aa15.77■□□□□ 0.11
CYFIP1-211ENST00000619348 ADGRL1O94910 1474 aa15.77■□□□□ 0.11
CYFIP1-211ENST00000619348 ZBTB22O15209 634 aa15.76■□□□□ 0.11
CYFIP1-211ENST00000619348 FANCAO15360 1455 aa15.76■□□□□ 0.11
CYFIP1-211ENST00000619348 TPM3P06753 285 aa15.76■□□□□ 0.11
CYFIP1-211ENST00000619348 FLIIQ13045 1269 aa15.76■□□□□ 0.11
CYFIP1-211ENST00000619348 NCBP3Q53F19 620 aaKnown RBP15.76■□□□□ 0.11
CYFIP1-211ENST00000619348 DNAJC25Q9H1X3 360 aa15.76■□□□□ 0.11
CYFIP1-211ENST00000619348 RASEFQ8IZ41 740 aa15.75■□□□□ 0.11
CYFIP1-211ENST00000619348 ESF1Q9H501 851 aaKnown RBP15.75■□□□□ 0.11
CYFIP1-211ENST00000619348 IFIT2P09913 472 aaKnown RBP15.75■□□□□ 0.11
CYFIP1-211ENST00000619348 ZNF165P49910 485 aa15.75■□□□□ 0.11
CYFIP1-211ENST00000619348 KIAA1524Q8TCG1 905 aa15.75■□□□□ 0.11
CYFIP1-211ENST00000619348 CEP152O94986 1710 aa15.75■□□□□ 0.11
CYFIP1-211ENST00000619348 RNF17Q9BXT8 1623 aaKnown RBP15.74■□□□□ 0.11
CYFIP1-211ENST00000619348 ANXA1P04083 346 aa15.74■□□□□ 0.11
CYFIP1-211ENST00000619348 TYRO3Q06418 890 aa15.74■□□□□ 0.11
CYFIP1-211ENST00000619348 MYOM1P52179 1685 aa15.74■□□□□ 0.11
CYFIP1-211ENST00000619348 CUL4AQ13619 759 aa15.74■□□□□ 0.11
CYFIP1-211ENST00000619348 HOMER1Q86YM7 354 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms