RNA–Protein interactions for RNA: ENST00000619138.4

CNTNAP3B-215, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-215ENST00000619138 PRDM4Q9UKN5 801 aa16.65■□□□□ 0.26
CNTNAP3B-215ENST00000619138 ADAMTSL3P82987 1691 aa16.65■□□□□ 0.26
CNTNAP3B-215ENST00000619138 DDX17Q92841 729 aaKnown RBP16.65■□□□□ 0.26
CNTNAP3B-215ENST00000619138 DYNC1I1O14576 645 aa16.65■□□□□ 0.26
CNTNAP3B-215ENST00000619138 LRSAM1Q6UWE0 723 aa16.64■□□□□ 0.25
CNTNAP3B-215ENST00000619138 ATP7BP35670 1465 aa16.64■□□□□ 0.25
CNTNAP3B-215ENST00000619138 DRC7Q8IY82 874 aa16.64■□□□□ 0.25
CNTNAP3B-215ENST00000619138 ZNF445P59923 1031 aa16.63■□□□□ 0.25
CNTNAP3B-215ENST00000619138 ZNF771Q7L3S4 317 aaPredicted RBP16.63■□□□□ 0.25
CNTNAP3B-215ENST00000619138 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.63■□□□□ 0.25
CNTNAP3B-215ENST00000619138 SULT6B1Q6IMI4 303 aa16.63■□□□□ 0.25
CNTNAP3B-215ENST00000619138 NECTIN2Q92692 538 aa16.63■□□□□ 0.25
CNTNAP3B-215ENST00000619138 FAM83GA6ND36 823 aa16.63■□□□□ 0.25
CNTNAP3B-215ENST00000619138 FIBPO43427 364 aa16.63■□□□□ 0.25
CNTNAP3B-215ENST00000619138 HCLS1P14317 486 aaPredicted RBP16.63■□□□□ 0.25
CNTNAP3B-215ENST00000619138 SETD1AO15047 1707 aaKnown RBP16.63■□□□□ 0.25
CNTNAP3B-215ENST00000619138 MED14O60244 1454 aa16.63■□□□□ 0.25
CNTNAP3B-215ENST00000619138 KRT24Q2M2I5 525 aa16.62■□□□□ 0.25
CNTNAP3B-215ENST00000619138 CPS1P31327 1500 aa16.62■□□□□ 0.25
CNTNAP3B-215ENST00000619138 ZBTB7BO15156 539 aaPredicted RBP16.62■□□□□ 0.25
CNTNAP3B-215ENST00000619138 CHAF1AQ13111 956 aaPredicted RBP16.62■□□□□ 0.25
CNTNAP3B-215ENST00000619138 TWISTNBQ3B726 338 aaPredicted RBP16.62■□□□□ 0.25
CNTNAP3B-215ENST00000619138 ZNF592Q92610 1267 aa16.62■□□□□ 0.25
CNTNAP3B-215ENST00000619138 GADD45BO75293 160 aaPredicted RBP16.61■□□□□ 0.25
CNTNAP3B-215ENST00000619138 SDSP20132 328 aa16.61■□□□□ 0.25
CNTNAP3B-215ENST00000619138 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.61■□□□□ 0.25
CNTNAP3B-215ENST00000619138 SIRT2Q8IXJ6 389 aa16.61■□□□□ 0.25
CNTNAP3B-215ENST00000619138 PLEKHM2Q8IWE5 1019 aa16.61■□□□□ 0.25
CNTNAP3B-215ENST00000619138 CPSF1Q10570 1443 aaKnown RBP16.61■□□□□ 0.25
CNTNAP3B-215ENST00000619138 PIK3R4Q99570 1358 aa16.6■□□□□ 0.25
CNTNAP3B-215ENST00000619138 MAP4K4O95819 1239 aaPredicted RBP16.6■□□□□ 0.25
CNTNAP3B-215ENST00000619138 AEBP1Q8IUX7 1158 aa16.6■□□□□ 0.25
CNTNAP3B-215ENST00000619138 SYAP1Q96A49 352 aaPredicted RBP16.6■□□□□ 0.25
CNTNAP3B-215ENST00000619138 C19orf44Q9H6X5 657 aa16.6■□□□□ 0.25
CNTNAP3B-215ENST00000619138 HAP1P54257 671 aaPredicted RBP16.6■□□□□ 0.25
CNTNAP3B-215ENST00000619138 USP6P35125 1406 aa16.59■□□□□ 0.25
CNTNAP3B-215ENST00000619138 PTCH1Q13635 1447 aa16.59■□□□□ 0.25
CNTNAP3B-215ENST00000619138 ZNF500O60304 480 aaPredicted RBP16.59■□□□□ 0.25
CNTNAP3B-215ENST00000619138 DDX54Q8TDD1 881 aaKnown RBP16.59■□□□□ 0.25
CNTNAP3B-215ENST00000619138 USP26Q9BXU7 913 aa16.59■□□□□ 0.25
CNTNAP3B-215ENST00000619138 ADCY5O95622 1261 aa16.59■□□□□ 0.25
CNTNAP3B-215ENST00000619138 NPHP1O15259 732 aa16.58■□□□□ 0.25
CNTNAP3B-215ENST00000619138 REC8O95072 547 aa16.58■□□□□ 0.25
CNTNAP3B-215ENST00000619138 NOLC1Q14978 699 aaKnown RBP eCLIP16.58■□□□□ 0.25
CNTNAP3B-215ENST00000619138 TMX3Q96JJ7 454 aa16.58■□□□□ 0.25
CNTNAP3B-215ENST00000619138 PHACTR3Q96KR7 559 aa16.58■□□□□ 0.25
CNTNAP3B-215ENST00000619138 CCDC94Q9BW85 323 aaPredicted RBP16.58■□□□□ 0.25
CNTNAP3B-215ENST00000619138 EXOC6BQ9Y2D4 811 aa16.58■□□□□ 0.25
CNTNAP3B-215ENST00000619138 KIF3AQ9Y496 699 aa16.58■□□□□ 0.25
CNTNAP3B-215ENST00000619138 TMEM94Q12767 1356 aa16.58■□□□□ 0.24
CNTNAP3B-215ENST00000619138 CHMP4BQ9H444 224 aaKnown RBP16.58■□□□□ 0.24
CNTNAP3B-215ENST00000619138 MAP3K19Q56UN5 1328 aa16.58■□□□□ 0.24
CNTNAP3B-215ENST00000619138 U2AF2P26368 475 aaKnown RBP eCLIP16.57■□□□□ 0.24
CNTNAP3B-215ENST00000619138 TTC22Q5TAA0 569 aa16.57■□□□□ 0.24
CNTNAP3B-215ENST00000619138 KRT28Q7Z3Y7 464 aa16.57■□□□□ 0.24
CNTNAP3B-215ENST00000619138 MTERF4Q7Z6M4 381 aaKnown RBP16.57■□□□□ 0.24
CNTNAP3B-215ENST00000619138 PDCL2Q8N4E4 241 aa16.57■□□□□ 0.24
CNTNAP3B-215ENST00000619138 CGNQ9P2M7 1197 aaKnown RBP16.57■□□□□ 0.24
CNTNAP3B-215ENST00000619138 FCHSD2O94868 740 aa16.57■□□□□ 0.24
CNTNAP3B-215ENST00000619138 ZC3H6P61129 1189 aaKnown RBP16.57■□□□□ 0.24
CNTNAP3B-215ENST00000619138 EIF4A2Q14240 407 aaKnown RBP16.57■□□□□ 0.24
CNTNAP3B-215ENST00000619138 SMAP1Q8IYB5 467 aaPredicted RBP16.57■□□□□ 0.24
CNTNAP3B-215ENST00000619138 ZDHHC9Q9Y397 364 aa16.57■□□□□ 0.24
CNTNAP3B-215ENST00000619138 TTC21AQ8NDW8 1320 aa16.56■□□□□ 0.24
CNTNAP3B-215ENST00000619138 MBD3O95983 291 aa16.56■□□□□ 0.24
CNTNAP3B-215ENST00000619138 USHBP1Q8N6Y0 703 aa16.56■□□□□ 0.24
CNTNAP3B-215ENST00000619138 C8orf58Q8NAV2 365 aa16.56■□□□□ 0.24
CNTNAP3B-215ENST00000619138 DIP2AQ14689 1571 aa16.56■□□□□ 0.24
CNTNAP3B-215ENST00000619138 CWC22Q9HCG8 908 aaKnown RBP16.56■□□□□ 0.24
CNTNAP3B-215ENST00000619138 MIS18AQ9NYP9 233 aa16.56■□□□□ 0.24
CNTNAP3B-215ENST00000619138 ZNF428Q96B54 188 aa16.56■□□□□ 0.24
CNTNAP3B-215ENST00000619138 ZNF335Q9H4Z2 1342 aaPredicted RBP16.55■□□□□ 0.24
CNTNAP3B-215ENST00000619138 BBXQ8WY36 941 aaPredicted RBP16.55■□□□□ 0.24
CNTNAP3B-215ENST00000619138 TRERF1Q96PN7 1200 aa16.55■□□□□ 0.24
CNTNAP3B-215ENST00000619138 CT47B1P0C2W7 299 aaPredicted RBP16.55■□□□□ 0.24
CNTNAP3B-215ENST00000619138 GIMAP6Q6P9H5 292 aa16.55■□□□□ 0.24
CNTNAP3B-215ENST00000619138 IL13P35225 146 aa16.55■□□□□ 0.24
CNTNAP3B-215ENST00000619138 ATP2B3Q16720 1220 aa16.54■□□□□ 0.24
CNTNAP3B-215ENST00000619138 CDC42BPGQ6DT37 1551 aa16.54■□□□□ 0.24
CNTNAP3B-215ENST00000619138 VGLL3A8MV65 326 aa16.54■□□□□ 0.24
CNTNAP3B-215ENST00000619138 ERC2O15083 957 aa16.54■□□□□ 0.24
CNTNAP3B-215ENST00000619138 MCCP23508 829 aa16.54■□□□□ 0.24
CNTNAP3B-215ENST00000619138 PHF23Q9BUL5 403 aaPredicted RBP16.54■□□□□ 0.24
CNTNAP3B-215ENST00000619138 F6X3S4 739 aa16.54■□□□□ 0.24
CNTNAP3B-215ENST00000619138 VAMP4O75379 141 aa16.54■□□□□ 0.24
CNTNAP3B-215ENST00000619138 USP48Q86UV5 1035 aa16.54■□□□□ 0.24
CNTNAP3B-215ENST00000619138 CABLES1Q8TDN4 633 aa16.54■□□□□ 0.24
CNTNAP3B-215ENST00000619138 MBIPQ9NS73 344 aa16.53■□□□□ 0.24
CNTNAP3B-215ENST00000619138 MRPL50Q8N5N7 158 aaKnown RBP16.53■□□□□ 0.24
CNTNAP3B-215ENST00000619138 CNPY2Q9Y2B0 182 aa16.53■□□□□ 0.24
CNTNAP3B-215ENST00000619138 HS1BP3Q53T59 392 aa16.52■□□□□ 0.24
CNTNAP3B-215ENST00000619138 PDLIM2Q96JY6 352 aa16.52■□□□□ 0.24
CNTNAP3B-215ENST00000619138 IFT57Q9NWB7 429 aa16.52■□□□□ 0.24
CNTNAP3B-215ENST00000619138 NCOA3Q9Y6Q9 1424 aa16.52■□□□□ 0.24
CNTNAP3B-215ENST00000619138 VPS37CA5D8V6 355 aaPredicted RBP16.52■□□□□ 0.24
CNTNAP3B-215ENST00000619138 PLCD3Q8N3E9 789 aa16.52■□□□□ 0.24
CNTNAP3B-215ENST00000619138 MEIS3Q99687 375 aa16.52■□□□□ 0.24
CNTNAP3B-215ENST00000619138 API5Q9BZZ5 524 aaKnown RBP16.52■□□□□ 0.24
CNTNAP3B-215ENST00000619138 CAMK4Q16566 473 aa16.52■□□□□ 0.23
CNTNAP3B-215ENST00000619138 ADGRL3Q9HAR2 1447 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms