RNA–Protein interactions for RNA: ENST00000618385.1

SYNJ2BP-COX16-204, Transcript of SYNJ2BP-COX16 readthrough, humanhuman

TSL 3

Gene SYNJ2BP-COX16, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNJ2BP-COX16-204ENST00000618385 CHD4Q14839 1912 aa18.49■□□□□ 0.55
SYNJ2BP-COX16-204ENST00000618385 SCN11AQ9UI33 1791 aa18.48■□□□□ 0.55
SYNJ2BP-COX16-204ENST00000618385 NPC1L1Q9UHC9 1359 aa18.48■□□□□ 0.55
SYNJ2BP-COX16-204ENST00000618385 CABP4P57796 275 aa18.48■□□□□ 0.55
SYNJ2BP-COX16-204ENST00000618385 ZNF831Q5JPB2 1677 aa18.47■□□□□ 0.55
SYNJ2BP-COX16-204ENST00000618385 CNGB1Q14028 1251 aaPredicted RBP18.47■□□□□ 0.55
SYNJ2BP-COX16-204ENST00000618385 ATG3Q9NT62 314 aa18.47■□□□□ 0.55
SYNJ2BP-COX16-204ENST00000618385 DIAPH1O60610 1272 aaKnown RBP18.46■□□□□ 0.55
SYNJ2BP-COX16-204ENST00000618385 PHF14O94880 888 aa18.45■□□□□ 0.54
SYNJ2BP-COX16-204ENST00000618385 MSL1Q68DK7 614 aa18.45■□□□□ 0.54
SYNJ2BP-COX16-204ENST00000618385 LINC00116Q8NCU8 138 aa18.45■□□□□ 0.54
SYNJ2BP-COX16-204ENST00000618385 RBM42Q9BTD8 480 aaKnown RBP18.45■□□□□ 0.54
SYNJ2BP-COX16-204ENST00000618385 KDM6AO15550 1401 aaPredicted RBP18.45■□□□□ 0.54
SYNJ2BP-COX16-204ENST00000618385 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.44■□□□□ 0.54
SYNJ2BP-COX16-204ENST00000618385 SSFA2P28290 1259 aa18.44■□□□□ 0.54
SYNJ2BP-COX16-204ENST00000618385 GNPATO15228 680 aa18.43■□□□□ 0.54
SYNJ2BP-COX16-204ENST00000618385 HMOX1P09601 288 aa18.43■□□□□ 0.54
SYNJ2BP-COX16-204ENST00000618385 ITPK1Q13572 414 aa18.43■□□□□ 0.54
SYNJ2BP-COX16-204ENST00000618385 COL5A3P25940 1745 aaPredicted RBP18.43■□□□□ 0.54
SYNJ2BP-COX16-204ENST00000618385 GPR162Q16538 588 aa18.42■□□□□ 0.54
SYNJ2BP-COX16-204ENST00000618385 AKAP4Q5JQC9 854 aa18.42■□□□□ 0.54
SYNJ2BP-COX16-204ENST00000618385 NFATC2IPQ8NCF5 419 aa18.41■□□□□ 0.54
SYNJ2BP-COX16-204ENST00000618385 PELP1Q8IZL8 1130 aaKnown RBP18.4■□□□□ 0.54
SYNJ2BP-COX16-204ENST00000618385 U2SURPO15042 1029 aaKnown RBP18.39■□□□□ 0.53
SYNJ2BP-COX16-204ENST00000618385 CFAP53Q96M91 514 aa18.39■□□□□ 0.53
SYNJ2BP-COX16-204ENST00000618385 RTCBQ9Y3I0 505 aaKnown RBP18.39■□□□□ 0.53
SYNJ2BP-COX16-204ENST00000618385 PTCD1O75127 700 aaKnown RBP18.38■□□□□ 0.53
SYNJ2BP-COX16-204ENST00000618385 AMIGO3Q86WK7 504 aa18.38■□□□□ 0.53
SYNJ2BP-COX16-204ENST00000618385 TRAPPC3LQ5T215 181 aa18.37■□□□□ 0.53
SYNJ2BP-COX16-204ENST00000618385 RC3H1Q5TC82 1133 aaKnown RBP18.37■□□□□ 0.53
SYNJ2BP-COX16-204ENST00000618385 SMIM5Q71RC9 77 aa18.37■□□□□ 0.53
SYNJ2BP-COX16-204ENST00000618385 NLGN2Q8NFZ4 835 aa18.37■□□□□ 0.53
SYNJ2BP-COX16-204ENST00000618385 CD2APQ9Y5K6 639 aa18.37■□□□□ 0.53
SYNJ2BP-COX16-204ENST00000618385 MYH14Q7Z406 1995 aaKnown RBP18.37■□□□□ 0.53
SYNJ2BP-COX16-204ENST00000618385 COL3A1P02461 1466 aaPredicted RBP18.36■□□□□ 0.53
SYNJ2BP-COX16-204ENST00000618385 SLC4A9Q96Q91 983 aa18.36■□□□□ 0.53
SYNJ2BP-COX16-204ENST00000618385 CNTNAP4Q9C0A0 1308 aa18.36■□□□□ 0.53
SYNJ2BP-COX16-204ENST00000618385 ADRA2BP18089 450 aa18.35■□□□□ 0.53
SYNJ2BP-COX16-204ENST00000618385 MTHFSDQ2M296 383 aaKnown RBP18.35■□□□□ 0.53
SYNJ2BP-COX16-204ENST00000618385 SLC52A2Q9HAB3 445 aa18.35■□□□□ 0.53
SYNJ2BP-COX16-204ENST00000618385 TJP1Q07157 1748 aa18.35■□□□□ 0.53
SYNJ2BP-COX16-204ENST00000618385 CICQ96RK0 1608 aaPredicted RBP18.34■□□□□ 0.53
SYNJ2BP-COX16-204ENST00000618385 RNMTO43148 476 aaKnown RBP18.34■□□□□ 0.53
SYNJ2BP-COX16-204ENST00000618385 LGR6Q9HBX8 967 aa18.34■□□□□ 0.53
SYNJ2BP-COX16-204ENST00000618385 ADAMTS7Q9UKP4 1686 aa18.34■□□□□ 0.53
SYNJ2BP-COX16-204ENST00000618385 MRC1P22897 1456 aa18.33■□□□□ 0.53
SYNJ2BP-COX16-204ENST00000618385 C4AP0C0L4 1744 aa18.33■□□□□ 0.52
SYNJ2BP-COX16-204ENST00000618385 RPS6KA4O75676 772 aa18.33■□□□□ 0.52
SYNJ2BP-COX16-204ENST00000618385 RFC4P35249 363 aa18.33■□□□□ 0.52
SYNJ2BP-COX16-204ENST00000618385 NUDCQ9Y266 331 aa18.33■□□□□ 0.52
SYNJ2BP-COX16-204ENST00000618385 GRIN3BO60391 1043 aa18.32■□□□□ 0.52
SYNJ2BP-COX16-204ENST00000618385 NLGN1Q8N2Q7 840 aa18.32■□□□□ 0.52
SYNJ2BP-COX16-204ENST00000618385 GAS2L2Q8NHY3 880 aa18.32■□□□□ 0.52
SYNJ2BP-COX16-204ENST00000618385 CRKLP46109 303 aaKnown RBP18.31■□□□□ 0.52
SYNJ2BP-COX16-204ENST00000618385 ARHGEF1Q92888 912 aaKnown RBP18.31■□□□□ 0.52
SYNJ2BP-COX16-204ENST00000618385 GNAT3A8MTJ3 354 aa18.29■□□□□ 0.52
SYNJ2BP-COX16-204ENST00000618385 MMP10P09238 476 aa18.29■□□□□ 0.52
SYNJ2BP-COX16-204ENST00000618385 PPP2R1AP30153 589 aa18.29■□□□□ 0.52
SYNJ2BP-COX16-204ENST00000618385 KIF13BQ9NQT8 1826 aa18.28■□□□□ 0.52
SYNJ2BP-COX16-204ENST00000618385 UTRNP46939 3433 aa18.28■□□□□ 0.52
SYNJ2BP-COX16-204ENST00000618385 UBR2Q8IWV8 1755 aa18.28■□□□□ 0.52
SYNJ2BP-COX16-204ENST00000618385 TEFQ10587 303 aa18.28■□□□□ 0.52
SYNJ2BP-COX16-204ENST00000618385 SLC39A6Q13433 755 aa18.28■□□□□ 0.52
SYNJ2BP-COX16-204ENST00000618385 YBX3P16989 372 aaKnown RBP eCLIP18.27■□□□□ 0.52
SYNJ2BP-COX16-204ENST00000618385 TTC5Q8N0Z6 440 aa18.27■□□□□ 0.52
SYNJ2BP-COX16-204ENST00000618385 ZNF784Q8NCA9 323 aaPredicted RBP18.27■□□□□ 0.52
SYNJ2BP-COX16-204ENST00000618385 SIPA1L3O60292 1781 aaPredicted RBP18.27■□□□□ 0.51
SYNJ2BP-COX16-204ENST00000618385 U2AF1L5P0DN76 240 aaPredicted RBP18.26■□□□□ 0.51
SYNJ2BP-COX16-204ENST00000618385 GYS1P13807 737 aa18.26■□□□□ 0.51
SYNJ2BP-COX16-204ENST00000618385 PRKAR2BP31323 418 aa18.26■□□□□ 0.51
SYNJ2BP-COX16-204ENST00000618385 U2AF1Q01081 240 aaKnown RBP eCLIP18.26■□□□□ 0.51
SYNJ2BP-COX16-204ENST00000618385 DNAJC10Q8IXB1 793 aa18.26■□□□□ 0.51
SYNJ2BP-COX16-204ENST00000618385 CCDC87Q9NVE4 849 aa18.26■□□□□ 0.51
SYNJ2BP-COX16-204ENST00000618385 KCPQ6ZWJ8 1503 aa18.25■□□□□ 0.51
SYNJ2BP-COX16-204ENST00000618385 VSIG10Q8N0Z9 540 aa18.25■□□□□ 0.51
SYNJ2BP-COX16-204ENST00000618385 PARP3Q9Y6F1 533 aa18.25■□□□□ 0.51
SYNJ2BP-COX16-204ENST00000618385 INTS5Q6P9B9 1019 aaKnown RBP18.24■□□□□ 0.51
SYNJ2BP-COX16-204ENST00000618385 RSPH6AQ9H0K4 717 aa18.24■□□□□ 0.51
SYNJ2BP-COX16-204ENST00000618385 N4BP2Q86UW6 1770 aaPredicted RBP18.24■□□□□ 0.51
SYNJ2BP-COX16-204ENST00000618385 ZPR1O75312 459 aa18.23■□□□□ 0.51
SYNJ2BP-COX16-204ENST00000618385 IL17REQ8NFR9 667 aa18.23■□□□□ 0.51
SYNJ2BP-COX16-204ENST00000618385 USP42Q9H9J4 1324 aaKnown RBP18.23■□□□□ 0.51
SYNJ2BP-COX16-204ENST00000618385 FCHSD2O94868 740 aa18.22■□□□□ 0.51
SYNJ2BP-COX16-204ENST00000618385 CYP19A1P11511 503 aaPredicted RBP18.22■□□□□ 0.51
SYNJ2BP-COX16-204ENST00000618385 PHACTR3Q96KR7 559 aa18.22■□□□□ 0.51
SYNJ2BP-COX16-204ENST00000618385 STARD3NLO95772 234 aa18.21■□□□□ 0.51
SYNJ2BP-COX16-204ENST00000618385 NEFMP07197 916 aa18.21■□□□□ 0.51
SYNJ2BP-COX16-204ENST00000618385 TGFB2P61812 414 aa18.21■□□□□ 0.51
SYNJ2BP-COX16-204ENST00000618385 RTF1Q92541 710 aaKnown RBP18.21■□□□□ 0.51
SYNJ2BP-COX16-204ENST00000618385 SRP68Q9UHB9 627 aaKnown RBP18.21■□□□□ 0.51
SYNJ2BP-COX16-204ENST00000618385 GOLGB1Q14789 3259 aaKnown RBP18.2■□□□□ 0.5
SYNJ2BP-COX16-204ENST00000618385 ZNF790Q6PG37 636 aa18.2■□□□□ 0.5
SYNJ2BP-COX16-204ENST00000618385 TEX13AQ9BXU3 409 aaPredicted RBP18.2■□□□□ 0.5
SYNJ2BP-COX16-204ENST00000618385 SOS1Q07889 1333 aaPredicted RBP18.2■□□□□ 0.5
SYNJ2BP-COX16-204ENST00000618385 C10orf71Q711Q0 1435 aa18.19■□□□□ 0.5
SYNJ2BP-COX16-204ENST00000618385 KIAA1551Q9HCM1 1747 aa18.19■□□□□ 0.5
SYNJ2BP-COX16-204ENST00000618385 WWC3Q9ULE0 1092 aa18.19■□□□□ 0.5
SYNJ2BP-COX16-204ENST00000618385 COL15A1P39059 1388 aa18.18■□□□□ 0.5
SYNJ2BP-COX16-204ENST00000618385 CEMIPQ8WUJ3 1361 aa18.18■□□□□ 0.5
SYNJ2BP-COX16-204ENST00000618385 FKBP8Q14318 412 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms