RNA–Protein interactions for RNA: ENST00000618001.4

TGIF1-223, Transcript of TGFB induced factor homeobox 1, humanhuman

TSL 2 BASIC

Gene TGIF1, Length 3,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGIF1-223ENST00000618001 LINC00116Q8NCU8 138 aa11.19□□□□□ -0.62
TGIF1-223ENST00000618001 KIF13BQ9NQT8 1826 aa11.19□□□□□ -0.62
TGIF1-223ENST00000618001 MSH5O43196 834 aa11.19□□□□□ -0.62
TGIF1-223ENST00000618001 HSP90AB1P08238 724 aaKnown RBP11.19□□□□□ -0.62
TGIF1-223ENST00000618001 GOLGB1Q14789 3259 aaKnown RBP11.18□□□□□ -0.62
TGIF1-223ENST00000618001 YBX3P16989 372 aaKnown RBP eCLIP11.18□□□□□ -0.629e-6■■■□□ 18.6
TGIF1-223ENST00000618001 ATG3Q9NT62 314 aa11.18□□□□□ -0.62
TGIF1-223ENST00000618001 KDM6AO15550 1401 aaPredicted RBP11.18□□□□□ -0.62
TGIF1-223ENST00000618001 AMOTQ4VCS5 1084 aa11.18□□□□□ -0.62
TGIF1-223ENST00000618001 DCAF5Q96JK2 942 aa11.18□□□□□ -0.62
TGIF1-223ENST00000618001 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.17□□□□□ -0.62
TGIF1-223ENST00000618001 MSL1Q68DK7 614 aa11.17□□□□□ -0.62
TGIF1-223ENST00000618001 KLHL34Q8N239 644 aa11.17□□□□□ -0.62
TGIF1-223ENST00000618001 ASAP1Q9ULH1 1129 aa11.17□□□□□ -0.62
TGIF1-223ENST00000618001 ITPK1Q13572 414 aa11.17□□□□□ -0.62
TGIF1-223ENST00000618001 KIAA1551Q9HCM1 1747 aa11.17□□□□□ -0.62
TGIF1-223ENST00000618001 PLEKHO1Q53GL0 409 aaPredicted RBP11.16□□□□□ -0.62
TGIF1-223ENST00000618001 ADCY9O60503 1353 aa11.16□□□□□ -0.62
TGIF1-223ENST00000618001 CNTNAP4Q9C0A0 1308 aa11.16□□□□□ -0.62
TGIF1-223ENST00000618001 RC3H1Q5TC82 1133 aaKnown RBP11.16□□□□□ -0.62
TGIF1-223ENST00000618001 ATP6V1AP38606 617 aa11.15□□□□□ -0.62
TGIF1-223ENST00000618001 TNNT2P45379 298 aaPredicted RBP11.15□□□□□ -0.62
TGIF1-223ENST00000618001 MRC1P22897 1456 aa11.15□□□□□ -0.62
TGIF1-223ENST00000618001 ADAMTS7Q9UKP4 1686 aa11.15□□□□□ -0.62
TGIF1-223ENST00000618001 ADRA2BP18089 450 aa11.15□□□□□ -0.62
TGIF1-223ENST00000618001 SCN11AQ9UI33 1791 aa11.15□□□□□ -0.62
TGIF1-223ENST00000618001 TJP1Q07157 1748 aa11.15□□□□□ -0.63
TGIF1-223ENST00000618001 C1QTNF8P60827 252 aa11.14□□□□□ -0.63
TGIF1-223ENST00000618001 MORC1Q86VD1 984 aa11.14□□□□□ -0.63
TGIF1-223ENST00000618001 POLR3GLQ9BT43 218 aa11.14□□□□□ -0.63
TGIF1-223ENST00000618001 C4AP0C0L4 1744 aa11.14□□□□□ -0.63
TGIF1-223ENST00000618001 GNPATO15228 680 aa11.14□□□□□ -0.63
TGIF1-223ENST00000618001 AMER1Q5JTC6 1135 aaPredicted RBP11.14□□□□□ -0.63
TGIF1-223ENST00000618001 PHF14O94880 888 aa11.14□□□□□ -0.63
TGIF1-223ENST00000618001 IL13P35225 146 aa11.14□□□□□ -0.63
TGIF1-223ENST00000618001 DIEXFQ68CQ4 756 aaKnown RBP11.14□□□□□ -0.63
TGIF1-223ENST00000618001 SLC4A9Q96Q91 983 aa11.14□□□□□ -0.63
TGIF1-223ENST00000618001 C10orf71Q711Q0 1435 aa11.13□□□□□ -0.63
TGIF1-223ENST00000618001 ZNF530Q6P9A1 599 aaPredicted RBP11.13□□□□□ -0.63
TGIF1-223ENST00000618001 KNSTRNQ9Y448 316 aa11.13□□□□□ -0.63
TGIF1-223ENST00000618001 CCER1Q8TC90 406 aaPredicted RBP11.12□□□□□ -0.63
TGIF1-223ENST00000618001 PXDNLA1KZ92 1463 aa11.12□□□□□ -0.63
TGIF1-223ENST00000618001 TSHZ2Q9NRE2 1034 aa11.12□□□□□ -0.63
TGIF1-223ENST00000618001 GIGYF1O75420 1035 aaPredicted RBP11.11□□□□□ -0.63
TGIF1-223ENST00000618001 RTCBQ9Y3I0 505 aaKnown RBP11.11□□□□□ -0.63
TGIF1-223ENST00000618001 ATP10DQ9P241 1426 aa11.11□□□□□ -0.63
TGIF1-223ENST00000618001 KIF7Q2M1P5 1343 aa11.11□□□□□ -0.63
TGIF1-223ENST00000618001 NPC1L1Q9UHC9 1359 aa11.11□□□□□ -0.63
TGIF1-223ENST00000618001 CABP4P57796 275 aa11.11□□□□□ -0.63
TGIF1-223ENST00000618001 AEBP1Q8IUX7 1158 aa11.11□□□□□ -0.63
TGIF1-223ENST00000618001 RPS6KA4O75676 772 aa11.11□□□□□ -0.63
TGIF1-223ENST00000618001 C1orf141Q5JVX7 400 aa11.11□□□□□ -0.63
TGIF1-223ENST00000618001 TRAPPC3LQ5T215 181 aa11.11□□□□□ -0.63
TGIF1-223ENST00000618001 SMIM5Q71RC9 77 aa11.11□□□□□ -0.63
TGIF1-223ENST00000618001 NLGN1Q8N2Q7 840 aa11.11□□□□□ -0.63
TGIF1-223ENST00000618001 MTHFSP49914 203 aa11.1□□□□□ -0.63
TGIF1-223ENST00000618001 TGFB2P61812 414 aa11.1□□□□□ -0.63
TGIF1-223ENST00000618001 SULT6B1Q6IMI4 303 aa11.1□□□□□ -0.63
TGIF1-223ENST00000618001 BRCA1P38398 1863 aaKnown RBP11.1□□□□□ -0.63
TGIF1-223ENST00000618001 PER1O15534 1290 aaPredicted RBP11.09□□□□□ -0.63
TGIF1-223ENST00000618001 AKAP4Q5JQC9 854 aa11.09□□□□□ -0.63
TGIF1-223ENST00000618001 MYH14Q7Z406 1995 aaKnown RBP11.09□□□□□ -0.63
TGIF1-223ENST00000618001 COL3A1P02461 1466 aaPredicted RBP11.09□□□□□ -0.63
TGIF1-223ENST00000618001 MMP10P09238 476 aa11.09□□□□□ -0.63
TGIF1-223ENST00000618001 ARHGEF1Q92888 912 aaKnown RBP11.09□□□□□ -0.63
TGIF1-223ENST00000618001 UBR2Q8IWV8 1755 aa11.09□□□□□ -0.63
TGIF1-223ENST00000618001 KCPQ6ZWJ8 1503 aa11.09□□□□□ -0.63
TGIF1-223ENST00000618001 GYS1P13807 737 aa11.09□□□□□ -0.63
TGIF1-223ENST00000618001 VIRMAQ69YN4 1812 aaKnown RBP11.08□□□□□ -0.64
TGIF1-223ENST00000618001 RBM42Q9BTD8 480 aaKnown RBP11.08□□□□□ -0.64
TGIF1-223ENST00000618001 NFATC2IPQ8NCF5 419 aa11.07□□□□□ -0.64
TGIF1-223ENST00000618001 N4BP2Q86UW6 1770 aaPredicted RBP11.07□□□□□ -0.64
TGIF1-223ENST00000618001 CRKLP46109 303 aaKnown RBP11.06□□□□□ -0.64
TGIF1-223ENST00000618001 SLC52A2Q9HAB3 445 aa11.06□□□□□ -0.64
TGIF1-223ENST00000618001 ARFGEF1Q9Y6D6 1849 aa11.06□□□□□ -0.64
TGIF1-223ENST00000618001 USP42Q9H9J4 1324 aaKnown RBP11.06□□□□□ -0.64
TGIF1-223ENST00000618001 SENP3-EIF4A1A0A087X0R7 540 aa11.06□□□□□ -0.64
TGIF1-223ENST00000618001 RFC4P35249 363 aa11.06□□□□□ -0.64
TGIF1-223ENST00000618001 CCDC87Q9NVE4 849 aa11.06□□□□□ -0.64
TGIF1-223ENST00000618001 NRXN2Q9P2S2 1712 aa11.06□□□□□ -0.64
TGIF1-223ENST00000618001 INTS5Q6P9B9 1019 aaKnown RBP11.05□□□□□ -0.64
TGIF1-223ENST00000618001 SIPA1L3O60292 1781 aaPredicted RBP11.05□□□□□ -0.64
TGIF1-223ENST00000618001 PARP3Q9Y6F1 533 aa11.04□□□□□ -0.64
TGIF1-223ENST00000618001 RNMTO43148 476 aaKnown RBP11.04□□□□□ -0.64
TGIF1-223ENST00000618001 PTCD1O75127 700 aaKnown RBP11.04□□□□□ -0.64
TGIF1-223ENST00000618001 VSIG10Q8N0Z9 540 aa11.04□□□□□ -0.64
TGIF1-223ENST00000618001 SOS1Q07889 1333 aaPredicted RBP11.04□□□□□ -0.64
TGIF1-223ENST00000618001 DIAPH1O60610 1272 aaKnown RBP11.03□□□□□ -0.64
TGIF1-223ENST00000618001 GPBP1L1Q9HC44 474 aaPredicted RBP11.03□□□□□ -0.64
TGIF1-223ENST00000618001 DLEC1Q9Y238 1755 aa11.03□□□□□ -0.64
TGIF1-223ENST00000618001 KCNA3P22001 575 aa11.03□□□□□ -0.64
TGIF1-223ENST00000618001 CYP19A1P11511 503 aaPredicted RBP11.02□□□□□ -0.65
TGIF1-223ENST00000618001 MTHFSDQ2M296 383 aaKnown RBP11.02□□□□□ -0.65
TGIF1-223ENST00000618001 LGR6Q9HBX8 967 aa11.02□□□□□ -0.65
TGIF1-223ENST00000618001 TM4SF1P30408 202 aa11.02□□□□□ -0.65
TGIF1-223ENST00000618001 DPEP1P16444 411 aa11.01□□□□□ -0.65
TGIF1-223ENST00000618001 DDR1Q08345 913 aa11.01□□□□□ -0.65
TGIF1-223ENST00000618001 SCN7AQ01118 1682 aa11.01□□□□□ -0.65
TGIF1-223ENST00000618001 A0A0G2JLW4 131 aa11.01□□□□□ -0.65
TGIF1-223ENST00000618001 POLRMTO00411 1230 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms