RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 ZSCAN25Q6NSZ9 544 aa12□□□□□ -0.49
CUL4A-212ENST00000617546 SLC12A5Q9H2X9 1139 aa12□□□□□ -0.49
CUL4A-212ENST00000617546 EPS15P42566 896 aa12□□□□□ -0.49
CUL4A-212ENST00000617546 TBC1D2BQ9UPU7 963 aa12□□□□□ -0.49
CUL4A-212ENST00000617546 CFAP43Q8NDM7 1665 aa12□□□□□ -0.49
CUL4A-212ENST00000617546 PDE4CQ08493 712 aa12□□□□□ -0.49
CUL4A-212ENST00000617546 ZSCAN16Q9H4T2 348 aaPredicted RBP12□□□□□ -0.49
CUL4A-212ENST00000617546 TCOF1Q13428 1488 aaKnown RBP12□□□□□ -0.49
CUL4A-212ENST00000617546 SLU7O95391 586 aaKnown RBP12□□□□□ -0.49
CUL4A-212ENST00000617546 GTF2F1P35269 517 aaKnown RBP eCLIP12□□□□□ -0.496e-9■■■□□ 16.6
CUL4A-212ENST00000617546 NCBP3Q53F19 620 aaKnown RBP12□□□□□ -0.49
CUL4A-212ENST00000617546 DDX24Q9GZR7 859 aaKnown RBP eCLIP12□□□□□ -0.497e-8■■□□□ 12.3
CUL4A-212ENST00000617546 ZSCAN22P10073 491 aaPredicted RBP11.99□□□□□ -0.49
CUL4A-212ENST00000617546 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.99□□□□□ -0.49
CUL4A-212ENST00000617546 MPNDQ8N594 471 aa11.99□□□□□ -0.49
CUL4A-212ENST00000617546 MYRIPQ8NFW9 859 aa11.99□□□□□ -0.49
CUL4A-212ENST00000617546 ZMYM4Q5VZL5 1548 aa11.99□□□□□ -0.49
CUL4A-212ENST00000617546 IQGAP2Q13576 1575 aa11.99□□□□□ -0.49
CUL4A-212ENST00000617546 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.99□□□□□ -0.49
CUL4A-212ENST00000617546 KLHL34Q8N239 644 aa11.99□□□□□ -0.49
CUL4A-212ENST00000617546 PRG4Q92954 1404 aaPredicted RBP11.99□□□□□ -0.49
CUL4A-212ENST00000617546 BBXQ8WY36 941 aaPredicted RBP11.99□□□□□ -0.49
CUL4A-212ENST00000617546 UGGT2Q9NYU1 1516 aa11.98□□□□□ -0.49
CUL4A-212ENST00000617546 ZNF165P49910 485 aa11.98□□□□□ -0.49
CUL4A-212ENST00000617546 MLECQ14165 292 aa11.98□□□□□ -0.49
CUL4A-212ENST00000617546 ZNF330Q9Y3S2 320 aaPredicted RBP11.98□□□□□ -0.49
CUL4A-212ENST00000617546 POLR3AO14802 1390 aaPredicted RBP11.98□□□□□ -0.49
CUL4A-212ENST00000617546 CEBPZQ03701 1054 aaKnown RBP11.98□□□□□ -0.49
CUL4A-212ENST00000617546 GTF2A1P52655 376 aaPredicted RBP11.97□□□□□ -0.49
CUL4A-212ENST00000617546 TRHP20396 242 aaPredicted RBP11.97□□□□□ -0.49
CUL4A-212ENST00000617546 BCL11BQ9C0K0 894 aaPredicted RBP11.97□□□□□ -0.49
CUL4A-212ENST00000617546 SPDYE4A6NLX3 237 aa11.97□□□□□ -0.49
CUL4A-212ENST00000617546 NECTIN2Q92692 538 aa11.97□□□□□ -0.49
CUL4A-212ENST00000617546 NEUROD6Q96NK8 337 aa11.97□□□□□ -0.49
CUL4A-212ENST00000617546 KIAA0586Q9BVV6 1533 aa11.97□□□□□ -0.49
CUL4A-212ENST00000617546 GOLGA6L10A0A0M3HER8 536 aa11.97□□□□□ -0.49
CUL4A-212ENST00000617546 SKAP1Q86WV1 359 aa11.97□□□□□ -0.49
CUL4A-212ENST00000617546 HMG20BQ9P0W2 317 aa11.97□□□□□ -0.49
CUL4A-212ENST00000617546 ZNF500O60304 480 aaPredicted RBP11.97□□□□□ -0.49
CUL4A-212ENST00000617546 HDGFL1Q5TGJ6 251 aa11.97□□□□□ -0.49
CUL4A-212ENST00000617546 SMARCC1Q92922 1105 aaPredicted RBP11.97□□□□□ -0.49
CUL4A-212ENST00000617546 TMX3Q96JJ7 454 aa11.97□□□□□ -0.49
CUL4A-212ENST00000617546 ARFGAP3Q9NP61 516 aa11.97□□□□□ -0.49
CUL4A-212ENST00000617546 CAMK4Q16566 473 aa11.96□□□□□ -0.49
CUL4A-212ENST00000617546 PHAXQ9H814 394 aaKnown RBP11.96□□□□□ -0.49
CUL4A-212ENST00000617546 RBM27Q9P2N5 1060 aaKnown RBP11.96□□□□□ -0.49
CUL4A-212ENST00000617546 FAM135AQ9P2D6 1515 aa11.96□□□□□ -0.49
CUL4A-212ENST00000617546 EHBP1Q8NDI1 1231 aa11.96□□□□□ -0.49
CUL4A-212ENST00000617546 PPP1R9BQ96SB3 815 aa11.96□□□□□ -0.49
CUL4A-212ENST00000617546 KIF14Q15058 1648 aa11.96□□□□□ -0.49
CUL4A-212ENST00000617546 IRX3P78415 501 aaPredicted RBP11.96□□□□□ -0.49
CUL4A-212ENST00000617546 KIF4BQ2VIQ3 1234 aa11.96□□□□□ -0.49
CUL4A-212ENST00000617546 CCDC158Q5M9N0 1113 aa11.96□□□□□ -0.49
CUL4A-212ENST00000617546 CWC27Q6UX04 472 aaKnown RBP11.96□□□□□ -0.49
CUL4A-212ENST00000617546 DNAAF4Q8WXU2 420 aa11.96□□□□□ -0.49
CUL4A-212ENST00000617546 PRIM1P49642 420 aaKnown RBP11.96□□□□□ -0.5
CUL4A-212ENST00000617546 PLEKHO1Q53GL0 409 aaPredicted RBP11.96□□□□□ -0.5
CUL4A-212ENST00000617546 LUZP1Q86V48 1076 aa11.96□□□□□ -0.5
CUL4A-212ENST00000617546 RBM33Q96EV2 1170 aaKnown RBP11.96□□□□□ -0.5
CUL4A-212ENST00000617546 TMX4Q9H1E5 349 aaPredicted RBP11.96□□□□□ -0.5
CUL4A-212ENST00000617546 IFT140Q96RY7 1462 aa11.96□□□□□ -0.5
CUL4A-212ENST00000617546 PIBF1Q8WXW3 757 aa11.95□□□□□ -0.5
CUL4A-212ENST00000617546 FAM177A1Q8N128 213 aaPredicted RBP11.95□□□□□ -0.5
CUL4A-212ENST00000617546 KDM4AO75164 1064 aa11.95□□□□□ -0.5
CUL4A-212ENST00000617546 STK3Q13188 491 aa11.95□□□□□ -0.5
CUL4A-212ENST00000617546 KIAA1328Q86T90 577 aa11.95□□□□□ -0.5
CUL4A-212ENST00000617546 PYM1Q9BRP8 204 aaKnown RBP11.95□□□□□ -0.5
CUL4A-212ENST00000617546 SLC52A1Q9NWF4 448 aa11.95□□□□□ -0.5
CUL4A-212ENST00000617546 U3KPZ7 1027 aaPredicted RBP11.95□□□□□ -0.5
CUL4A-212ENST00000617546 ANKRD36BQ8N2N9 1353 aa11.95□□□□□ -0.5
CUL4A-212ENST00000617546 CDK13Q14004 1512 aaKnown RBP11.95□□□□□ -0.5
CUL4A-212ENST00000617546 NESP48681 1621 aa11.95□□□□□ -0.5
CUL4A-212ENST00000617546 ERO1AQ96HE7 468 aa11.95□□□□□ -0.5
CUL4A-212ENST00000617546 NPC1L1Q9UHC9 1359 aa11.95□□□□□ -0.5
CUL4A-212ENST00000617546 SRGAP3O43295 1099 aa11.95□□□□□ -0.5
CUL4A-212ENST00000617546 SLC3A2P08195 630 aaKnown RBP11.94□□□□□ -0.5
CUL4A-212ENST00000617546 HCLS1P14317 486 aaPredicted RBP11.94□□□□□ -0.5
CUL4A-212ENST00000617546 CCDC9Q9Y3X0 531 aaKnown RBP11.94□□□□□ -0.5
CUL4A-212ENST00000617546 GJB2P29033 226 aa11.94□□□□□ -0.5
CUL4A-212ENST00000617546 BRPF1P55201 1214 aaPredicted RBP11.94□□□□□ -0.5
CUL4A-212ENST00000617546 CCDC57Q2TAC2 916 aa11.94□□□□□ -0.5
CUL4A-212ENST00000617546 HSP90AB2PQ58FF8 381 aa11.94□□□□□ -0.5
CUL4A-212ENST00000617546 UTP14CQ5TAP6 766 aaKnown RBP11.94□□□□□ -0.5
CUL4A-212ENST00000617546 CEP112Q8N8E3 955 aa11.94□□□□□ -0.5
CUL4A-212ENST00000617546 AACSQ86V21 672 aa11.94□□□□□ -0.5
CUL4A-212ENST00000617546 PCDHB15Q9Y5E8 787 aa11.94□□□□□ -0.5
CUL4A-212ENST00000617546 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.94□□□□□ -0.5
CUL4A-212ENST00000617546 LMAN1P49257 510 aa11.94□□□□□ -0.5
CUL4A-212ENST00000617546 CKAP4Q07065 602 aaKnown RBP11.94□□□□□ -0.5
CUL4A-212ENST00000617546 TUBB2AQ13885 445 aa11.94□□□□□ -0.5
CUL4A-212ENST00000617546 ODF2Q5BJF6 829 aa11.94□□□□□ -0.5
CUL4A-212ENST00000617546 KANK3Q6NY19 840 aa11.94□□□□□ -0.5
CUL4A-212ENST00000617546 TAF4BQ92750 862 aa11.94□□□□□ -0.5
CUL4A-212ENST00000617546 SLC26A8Q96RN1 970 aa11.94□□□□□ -0.5
CUL4A-212ENST00000617546 TUBB2BQ9BVA1 445 aa11.94□□□□□ -0.5
CUL4A-212ENST00000617546 ANKRD18AQ8IVF6 992 aa11.93□□□□□ -0.5
CUL4A-212ENST00000617546 BLMP54132 1417 aaPredicted RBP11.93□□□□□ -0.5
CUL4A-212ENST00000617546 DISP3Q9P2K9 1392 aa11.93□□□□□ -0.5
CUL4A-212ENST00000617546 CT47A1Q5JQC4 288 aaPredicted RBP11.93□□□□□ -0.5
CUL4A-212ENST00000617546 TMEM132EQ6IEE7 984 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms