RNA–Protein interactions for RNA: ENST00000617399.1

NBR1-208, Transcript of NBR1, autophagy cargo receptor, human

Gene NBR1, Length 63 nt, Biotype misc RNA, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NBR1-208	ENST00000617399	GPAM	Q9HCL2	828 aa		8	□□□□□ -1.13
NBR1-208	ENST00000617399	IGF1R	P08069	1367 aa		7.99	□□□□□ -1.13
NBR1-208	ENST00000617399	CELA2B	P08218	269 aa	Predicted RBP	7.99	□□□□□ -1.13
NBR1-208	ENST00000617399	TMEM214	Q6NUQ4	689 aa	Known RBP	7.99	□□□□□ -1.13
NBR1-208	ENST00000617399	PIK3CD	O00329	1044 aa		7.98	□□□□□ -1.13
NBR1-208	ENST00000617399	SCNN1D	P51172	638 aa		7.98	□□□□□ -1.13
NBR1-208	ENST00000617399	TLR1	Q15399	786 aa		7.98	□□□□□ -1.13
NBR1-208	ENST00000617399	GNAS	Q5JWF2	1037 aa		7.98	□□□□□ -1.13
NBR1-208	ENST00000617399	SIRT1	Q96EB6	747 aa		7.98	□□□□□ -1.13
NBR1-208	ENST00000617399	POM121	Q96HA1	1249 aa		7.98	□□□□□ -1.13
NBR1-208	ENST00000617399	TRERF1	Q96PN7	1200 aa		7.98	□□□□□ -1.13
NBR1-208	ENST00000617399		A0A1B0GTH6	734 aa		7.97	□□□□□ -1.13
NBR1-208	ENST00000617399	GTF2E1	P29083	439 aa	Predicted RBP	7.97	□□□□□ -1.13
NBR1-208	ENST00000617399	SOX11	P35716	441 aa		7.97	□□□□□ -1.13
NBR1-208	ENST00000617399	MAP7D1	Q3KQU3	841 aa		7.97	□□□□□ -1.13
NBR1-208	ENST00000617399	GDF10	P55107	478 aa		7.96	□□□□□ -1.14
NBR1-208	ENST00000617399	MAP3K10	Q02779	954 aa		7.96	□□□□□ -1.14
NBR1-208	ENST00000617399	RASSF7	Q02833	373 aa		7.96	□□□□□ -1.14
NBR1-208	ENST00000617399	PPARGC1B	Q86YN6	1023 aa	Known RBP	7.96	□□□□□ -1.14
NBR1-208	ENST00000617399	RHBDD1	Q8TEB9	315 aa		7.96	□□□□□ -1.14
NBR1-208	ENST00000617399	RNF225	M0QZC1	329 aa	Predicted RBP	7.95	□□□□□ -1.14
NBR1-208	ENST00000617399	INHA	P05111	366 aa		7.95	□□□□□ -1.14
NBR1-208	ENST00000617399	MX2	P20592	715 aa		7.95	□□□□□ -1.14
NBR1-208	ENST00000617399	RUBCNL	Q9H714	662 aa		7.95	□□□□□ -1.14
NBR1-208	ENST00000617399	MSX1	P28360	303 aa		7.94	□□□□□ -1.14
NBR1-208	ENST00000617399	MARS	P56192	900 aa	Known RBP	7.94	□□□□□ -1.14
NBR1-208	ENST00000617399	UBAP2L	Q14157	1087 aa	Known RBP	7.94	□□□□□ -1.14
NBR1-208	ENST00000617399	TMEM151A	Q8N4L1	468 aa		7.94	□□□□□ -1.14
NBR1-208	ENST00000617399	KCTD17	Q8N5Z5	321 aa		7.94	□□□□□ -1.14
NBR1-208	ENST00000617399	ACD	Q96AP0	544 aa		7.94	□□□□□ -1.14
NBR1-208	ENST00000617399	GDF11	O95390	407 aa		7.93	□□□□□ -1.14
NBR1-208	ENST00000617399	IRS1	P35568	1242 aa		7.93	□□□□□ -1.14
NBR1-208	ENST00000617399	PLA2G4A	P47712	749 aa		7.93	□□□□□ -1.14
NBR1-208	ENST00000617399	ALG2	Q9H553	416 aa		7.93	□□□□□ -1.14
NBR1-208	ENST00000617399	TMEM229A	B2RXF0	380 aa		7.92	□□□□□ -1.14
NBR1-208	ENST00000617399	CSB-PGBD3	P0DP91	1061 aa		7.92	□□□□□ -1.14
NBR1-208	ENST00000617399	SKI	P12755	728 aa		7.92	□□□□□ -1.14
NBR1-208	ENST00000617399	PGBD3	Q8N328	593 aa		7.92	□□□□□ -1.14
NBR1-208	ENST00000617399	CFHR5	Q9BXR6	569 aa		7.92	□□□□□ -1.14
NBR1-208	ENST00000617399	SERTAD1	Q9UHV2	236 aa		7.92	□□□□□ -1.14
NBR1-208	ENST00000617399	BCR	P11274	1271 aa		7.91	□□□□□ -1.14
NBR1-208	ENST00000617399	SMTN	P53814	917 aa		7.91	□□□□□ -1.14
NBR1-208	ENST00000617399	LBR	Q14739	615 aa	Known RBP	7.91	□□□□□ -1.14
NBR1-208	ENST00000617399	ENAM	Q9NRM1	1142 aa		7.91	□□□□□ -1.14
NBR1-208	ENST00000617399	PCDHGA11	Q9Y5H2	935 aa		7.91	□□□□□ -1.14
NBR1-208	ENST00000617399	POM121C	A8CG34	1229 aa		7.9	□□□□□ -1.14
NBR1-208	ENST00000617399	EML3	Q32P44	896 aa		7.9	□□□□□ -1.14
NBR1-208	ENST00000617399	EFHC2	Q5JST6	749 aa		7.9	□□□□□ -1.14
NBR1-208	ENST00000617399	WWC1	Q8IX03	1113 aa		7.9	□□□□□ -1.14
NBR1-208	ENST00000617399	SCARF2	Q96GP6	870 aa	Predicted RBP	7.9	□□□□□ -1.14
NBR1-208	ENST00000617399	NSFL1C	Q9UNZ2	370 aa	Known RBP	7.9	□□□□□ -1.14
NBR1-208	ENST00000617399	USP3	Q9Y6I4	520 aa		7.9	□□□□□ -1.14
NBR1-208	ENST00000617399	RAD21	O60216	631 aa		7.89	□□□□□ -1.15
NBR1-208	ENST00000617399	UBTF	P17480	764 aa	Known RBP	7.89	□□□□□ -1.15
NBR1-208	ENST00000617399	NCOA4	Q13772	614 aa		7.89	□□□□□ -1.15
NBR1-208	ENST00000617399	TBC1D9	Q6ZT07	1266 aa		7.89	□□□□□ -1.15
NBR1-208	ENST00000617399	ZNF295-AS1	Q8N0V1	137 aa		7.89	□□□□□ -1.15
NBR1-208	ENST00000617399	ABHD17A	Q96GS6	310 aa		7.89	□□□□□ -1.15
NBR1-208	ENST00000617399	NIFK	Q9BYG3	293 aa	Known RBP	7.89	□□□□□ -1.15
NBR1-208	ENST00000617399	CRISPLD1	Q9H336	500 aa		7.89	□□□□□ -1.15
NBR1-208	ENST00000617399	PHF24	Q9UPV7	400 aa		7.89	□□□□□ -1.15
NBR1-208	ENST00000617399	CNTNAP5	Q8WYK1	1306 aa		7.88	□□□□□ -1.15
NBR1-208	ENST00000617399	ATP4A	P20648	1035 aa		7.88	□□□□□ -1.15
NBR1-208	ENST00000617399	MAP2K3	P46734	347 aa		7.88	□□□□□ -1.15
NBR1-208	ENST00000617399	FLII	Q13045	1269 aa		7.88	□□□□□ -1.15
NBR1-208	ENST00000617399	NEDD1	Q8NHV4	660 aa		7.88	□□□□□ -1.15
NBR1-208	ENST00000617399	ADAMTS19	Q8TE59	1207 aa		7.88	□□□□□ -1.15
NBR1-208	ENST00000617399	AIDA	Q96BJ3	306 aa		7.88	□□□□□ -1.15
NBR1-208	ENST00000617399	SLC4A9	Q96Q91	983 aa		7.88	□□□□□ -1.15
NBR1-208	ENST00000617399	OXCT2	Q9BYC2	517 aa	Predicted RBP	7.88	□□□□□ -1.15
NBR1-208	ENST00000617399	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	7.88	□□□□□ -1.15
NBR1-208	ENST00000617399	NOD1	Q9Y239	953 aa		7.88	□□□□□ -1.15
NBR1-208	ENST00000617399		A6NJY4	79 aa		7.87	□□□□□ -1.15
NBR1-208	ENST00000617399	BNIP3L	O60238	219 aa		7.87	□□□□□ -1.15
NBR1-208	ENST00000617399	GTF2I	P78347	998 aa		7.87	□□□□□ -1.15
NBR1-208	ENST00000617399	MTFR1	Q15390	333 aa		7.87	□□□□□ -1.15
NBR1-208	ENST00000617399	KANK3	Q6NY19	840 aa		7.87	□□□□□ -1.15
NBR1-208	ENST00000617399	DEPDC4	Q8N2C3	294 aa		7.87	□□□□□ -1.15
NBR1-208	ENST00000617399	NFATC2IP	Q8NCF5	419 aa		7.87	□□□□□ -1.15
NBR1-208	ENST00000617399	KLRG1	Q96E93	195 aa		7.87	□□□□□ -1.15
NBR1-208	ENST00000617399	NDFIP2	Q9NV92	336 aa		7.87	□□□□□ -1.15
NBR1-208	ENST00000617399	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	7.87	□□□□□ -1.15
NBR1-208	ENST00000617399	USP17L5	A8MUK1	530 aa		7.86	□□□□□ -1.15
NBR1-208	ENST00000617399	CDK2AP1	O14519	115 aa		7.86	□□□□□ -1.15
NBR1-208	ENST00000617399	C2CD2L	O14523	706 aa		7.86	□□□□□ -1.15
NBR1-208	ENST00000617399	OIP5	O43482	229 aa		7.86	□□□□□ -1.15
NBR1-208	ENST00000617399	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	7.86	□□□□□ -1.15
NBR1-208	ENST00000617399	DNAAF2	Q9NVR5	837 aa	Known RBP	7.86	□□□□□ -1.15
NBR1-208	ENST00000617399	LZTS3	O60299	673 aa	Predicted RBP	7.85	□□□□□ -1.15
NBR1-208	ENST00000617399	FGFR3	P22607	806 aa		7.85	□□□□□ -1.15
NBR1-208	ENST00000617399	CTBS	Q01459	385 aa		7.85	□□□□□ -1.15
NBR1-208	ENST00000617399	PSME1	Q06323	249 aa		7.85	□□□□□ -1.15
NBR1-208	ENST00000617399	C1orf229	Q6ZS94	237 aa	Predicted RBP	7.85	□□□□□ -1.15
NBR1-208	ENST00000617399	C1orf216	Q8TAB5	229 aa		7.85	□□□□□ -1.15
NBR1-208	ENST00000617399	ZCCHC2	Q9C0B9	1178 aa	Known RBP	7.85	□□□□□ -1.15
NBR1-208	ENST00000617399	LRRC4B	Q9NT99	713 aa		7.85	□□□□□ -1.15
NBR1-208	ENST00000617399	ZNF358	Q9NW07	568 aa		7.85	□□□□□ -1.15
NBR1-208	ENST00000617399	CABP1	Q9NZU7	370 aa		7.85	□□□□□ -1.15
NBR1-208	ENST00000617399	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	7.85	□□□□□ -1.15
NBR1-208	ENST00000617399	SHISA8	B8ZZ34	492 aa		7.84	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms