RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 AKAP4Q5JQC9 854 aa13.07□□□□□ -0.32
TARDBP-218ENST00000617172 RC3H1Q5TC82 1133 aaKnown RBP13.07□□□□□ -0.32
TARDBP-218ENST00000617172 RBM42Q9BTD8 480 aaKnown RBP13.07□□□□□ -0.32
TARDBP-218ENST00000617172 CD2APQ9Y5K6 639 aa13.07□□□□□ -0.32
TARDBP-218ENST00000617172 GNPATO15228 680 aa13.06□□□□□ -0.32
TARDBP-218ENST00000617172 PHF14O94880 888 aa13.06□□□□□ -0.32
TARDBP-218ENST00000617172 MSL1Q68DK7 614 aa13.06□□□□□ -0.32
TARDBP-218ENST00000617172 NFATC2IPQ8NCF5 419 aa13.06□□□□□ -0.32
TARDBP-218ENST00000617172 TOGARAM1Q9Y4F4 1720 aa13.05□□□□□ -0.32
TARDBP-218ENST00000617172 ADRA2BP18089 450 aa13.05□□□□□ -0.32
TARDBP-218ENST00000617172 TRAPPC3LQ5T215 181 aa13.05□□□□□ -0.32
TARDBP-218ENST00000617172 RTCBQ9Y3I0 505 aaKnown RBP13.05□□□□□ -0.32
TARDBP-218ENST00000617172 UTRNP46939 3433 aa13.04□□□□□ -0.32
TARDBP-218ENST00000617172 ITGB4P16144 1822 aa13.04□□□□□ -0.32
TARDBP-218ENST00000617172 GRIN3BO60391 1043 aa13.04□□□□□ -0.32
TARDBP-218ENST00000617172 HMOX1P09601 288 aa13.04□□□□□ -0.32
TARDBP-218ENST00000617172 AMIGO3Q86WK7 504 aa13.04□□□□□ -0.32
TARDBP-218ENST00000617172 C5P01031 1676 aa13.04□□□□□ -0.32
TARDBP-218ENST00000617172 KDM6AO15550 1401 aaPredicted RBP13.04□□□□□ -0.32
TARDBP-218ENST00000617172 C4BP0C0L5 1744 aa13.03□□□□□ -0.32
TARDBP-218ENST00000617172 PTCD1O75127 700 aaKnown RBP13.03□□□□□ -0.32
TARDBP-218ENST00000617172 NLGN1Q8N2Q7 840 aa13.03□□□□□ -0.32
TARDBP-218ENST00000617172 NLGN2Q8NFZ4 835 aa13.03□□□□□ -0.32
TARDBP-218ENST00000617172 CFAP53Q96M91 514 aa13.03□□□□□ -0.32
TARDBP-218ENST00000617172 SLC4A9Q96Q91 983 aa13.03□□□□□ -0.32
TARDBP-218ENST00000617172 CNTNAP4Q9C0A0 1308 aa13.03□□□□□ -0.32
TARDBP-218ENST00000617172 COL24A1Q17RW2 1714 aa13.02□□□□□ -0.32
TARDBP-218ENST00000617172 RPS6KA4O75676 772 aa13.02□□□□□ -0.33
TARDBP-218ENST00000617172 PELP1Q8IZL8 1130 aaKnown RBP13.02□□□□□ -0.33
TARDBP-218ENST00000617172 SLC52A2Q9HAB3 445 aa13.02□□□□□ -0.33
TARDBP-218ENST00000617172 U2SURPO15042 1029 aaKnown RBP13.01□□□□□ -0.33
TARDBP-218ENST00000617172 RNMTO43148 476 aaKnown RBP13.01□□□□□ -0.33
TARDBP-218ENST00000617172 RFC4P35249 363 aa13.01□□□□□ -0.33
TARDBP-218ENST00000617172 CNGB1Q14028 1251 aaPredicted RBP13.01□□□□□ -0.33
TARDBP-218ENST00000617172 MTHFSDQ2M296 383 aaKnown RBP13.01□□□□□ -0.33
TARDBP-218ENST00000617172 LGR6Q9HBX8 967 aa13.01□□□□□ -0.33
TARDBP-218ENST00000617172 TAF1LQ8IZX4 1826 aa13□□□□□ -0.33
TARDBP-218ENST00000617172 TUBGCP6Q96RT7 1819 aa13□□□□□ -0.33
TARDBP-218ENST00000617172 SMIM5Q71RC9 77 aa13□□□□□ -0.33
TARDBP-218ENST00000617172 ARHGEF1Q92888 912 aaKnown RBP13□□□□□ -0.33
TARDBP-218ENST00000617172 NUDCQ9Y266 331 aa13□□□□□ -0.33
TARDBP-218ENST00000617172 CRKLP46109 303 aaKnown RBP12.99□□□□□ -0.33
TARDBP-218ENST00000617172 ZNF784Q8NCA9 323 aaPredicted RBP12.99□□□□□ -0.33
TARDBP-218ENST00000617172 GAS2L2Q8NHY3 880 aa12.99□□□□□ -0.33
TARDBP-218ENST00000617172 GOLGB1Q14789 3259 aaKnown RBP12.98□□□□□ -0.33
TARDBP-218ENST00000617172 MMP10P09238 476 aa12.98□□□□□ -0.33
TARDBP-218ENST00000617172 ZNF831Q5JPB2 1677 aa12.97□□□□□ -0.33
TARDBP-218ENST00000617172 GNAT3A8MTJ3 354 aa12.97□□□□□ -0.33
TARDBP-218ENST00000617172 YBX3P16989 372 aaKnown RBP eCLIP12.97□□□□□ -0.338e-13■□□□□ 8.1
TARDBP-218ENST00000617172 VSIG10Q8N0Z9 540 aa12.97□□□□□ -0.33
TARDBP-218ENST00000617172 UBR3Q6ZT12 1888 aa12.96□□□□□ -0.33
TARDBP-218ENST00000617172 GYS1P13807 737 aa12.96□□□□□ -0.33
TARDBP-218ENST00000617172 FCHSD2O94868 740 aa12.95□□□□□ -0.34
TARDBP-218ENST00000617172 PPP2R1AP30153 589 aa12.95□□□□□ -0.34
TARDBP-218ENST00000617172 TGFB2P61812 414 aa12.95□□□□□ -0.34
TARDBP-218ENST00000617172 TEFQ10587 303 aa12.95□□□□□ -0.34
TARDBP-218ENST00000617172 SLC39A6Q13433 755 aa12.95□□□□□ -0.34
TARDBP-218ENST00000617172 INTS5Q6P9B9 1019 aaKnown RBP12.95□□□□□ -0.34
TARDBP-218ENST00000617172 TTC5Q8N0Z6 440 aa12.95□□□□□ -0.34
TARDBP-218ENST00000617172 CCDC87Q9NVE4 849 aa12.95□□□□□ -0.34
TARDBP-218ENST00000617172 PARP3Q9Y6F1 533 aa12.95□□□□□ -0.34
TARDBP-218ENST00000617172 COL3A1P02461 1466 aaPredicted RBP12.94□□□□□ -0.34
TARDBP-218ENST00000617172 CYP19A1P11511 503 aaPredicted RBP12.94□□□□□ -0.34
TARDBP-218ENST00000617172 DNAJC10Q8IXB1 793 aa12.94□□□□□ -0.34
TARDBP-218ENST00000617172 IL17REQ8NFR9 667 aa12.94□□□□□ -0.34
TARDBP-218ENST00000617172 TEX13AQ9BXU3 409 aaPredicted RBP12.94□□□□□ -0.34
TARDBP-218ENST00000617172 ZPR1O75312 459 aa12.93□□□□□ -0.34
TARDBP-218ENST00000617172 STARD3NLO95772 234 aa12.93□□□□□ -0.34
TARDBP-218ENST00000617172 U2AF1L5P0DN76 240 aaPredicted RBP12.93□□□□□ -0.34
TARDBP-218ENST00000617172 PRKAR2BP31323 418 aa12.93□□□□□ -0.34
TARDBP-218ENST00000617172 U2AF1Q01081 240 aaKnown RBP eCLIP12.93□□□□□ -0.343e-7■■■□□ 15.3
TARDBP-218ENST00000617172 RSPH6AQ9H0K4 717 aa12.93□□□□□ -0.34
TARDBP-218ENST00000617172 USP42Q9H9J4 1324 aaKnown RBP12.92□□□□□ -0.34
TARDBP-218ENST00000617172 MRC1P22897 1456 aa12.92□□□□□ -0.34
TARDBP-218ENST00000617172 ZNF790Q6PG37 636 aa12.92□□□□□ -0.34
TARDBP-218ENST00000617172 RTF1Q92541 710 aaKnown RBP12.91□□□□□ -0.34
TARDBP-218ENST00000617172 PHACTR3Q96KR7 559 aa12.91□□□□□ -0.34
TARDBP-218ENST00000617172 SCN11AQ9UI33 1791 aa12.91□□□□□ -0.34
TARDBP-218ENST00000617172 SOS1Q07889 1333 aaPredicted RBP12.9□□□□□ -0.34
TARDBP-218ENST00000617172 HTATSF1O43719 755 aaKnown RBP12.9□□□□□ -0.34
TARDBP-218ENST00000617172 NEFMP07197 916 aa12.9□□□□□ -0.34
TARDBP-218ENST00000617172 FKBP8Q14318 412 aa12.9□□□□□ -0.34
TARDBP-218ENST00000617172 SRP68Q9UHB9 627 aaKnown RBP12.9□□□□□ -0.34
TARDBP-218ENST00000617172 NARFQ9UHQ1 456 aa12.9□□□□□ -0.34
TARDBP-218ENST00000617172 A0A087WZG4 1122 aa12.89□□□□□ -0.35
TARDBP-218ENST00000617172 TM4SF1P30408 202 aa12.89□□□□□ -0.35
TARDBP-218ENST00000617172 ZNF496Q96IT1 587 aaPredicted RBP12.89□□□□□ -0.35
TARDBP-218ENST00000617172 FMNL2Q96PY5 1086 aa12.89□□□□□ -0.35
TARDBP-218ENST00000617172 CHD4Q14839 1912 aa12.89□□□□□ -0.35
TARDBP-218ENST00000617172 CEMIPQ8WUJ3 1361 aa12.89□□□□□ -0.35
TARDBP-218ENST00000617172 COL5A3P25940 1745 aaPredicted RBP12.88□□□□□ -0.35
TARDBP-218ENST00000617172 A0A0G2JLW4 131 aa12.88□□□□□ -0.35
TARDBP-218ENST00000617172 BTBD11A6QL63 1104 aa12.88□□□□□ -0.35
TARDBP-218ENST00000617172 USPL1Q5W0Q7 1092 aa12.88□□□□□ -0.35
TARDBP-218ENST00000617172 NPM2Q86SE8 214 aaKnown RBP12.88□□□□□ -0.35
TARDBP-218ENST00000617172 PNNQ9H307 717 aaKnown RBP12.88□□□□□ -0.35
TARDBP-218ENST00000617172 ZBTB1Q9Y2K1 713 aa12.88□□□□□ -0.35
TARDBP-218ENST00000617172 CICQ96RK0 1608 aaPredicted RBP12.88□□□□□ -0.35
TARDBP-218ENST00000617172 ADAMTS7Q9UKP4 1686 aa12.87□□□□□ -0.35
TARDBP-218ENST00000617172 HEG1Q9ULI3 1381 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms