RNA–Protein interactions for RNA: ENST00000616995.4

PRKD1-209, Transcript of protein kinase D1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKD1, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-209ENST00000616995 PTPRCP08575 1304 aa17.77■□□□□ 0.44
PRKD1-209ENST00000616995 SRCIN1Q9C0H9 1055 aa17.77■□□□□ 0.44
PRKD1-209ENST00000616995 ANP32BQ92688 251 aaKnown RBP17.76■□□□□ 0.43
PRKD1-209ENST00000616995 CHMP3Q9Y3E7 222 aa17.76■□□□□ 0.43
PRKD1-209ENST00000616995 MCCP23508 829 aa17.75■□□□□ 0.43
PRKD1-209ENST00000616995 PDE1AP54750 535 aa17.75■□□□□ 0.43
PRKD1-209ENST00000616995 CABLES1Q8TDN4 633 aa17.75■□□□□ 0.43
PRKD1-209ENST00000616995 PIK3R4Q99570 1358 aa17.75■□□□□ 0.43
PRKD1-209ENST00000616995 TTC21AQ8NDW8 1320 aa17.75■□□□□ 0.43
PRKD1-209ENST00000616995 ERC2O15083 957 aa17.75■□□□□ 0.43
PRKD1-209ENST00000616995 SLC39A6Q13433 755 aa17.75■□□□□ 0.43
PRKD1-209ENST00000616995 ZGPATQ8N5A5 531 aaKnown RBP17.75■□□□□ 0.43
PRKD1-209ENST00000616995 DIP2BQ9P265 1576 aa17.75■□□□□ 0.43
PRKD1-209ENST00000616995 CDK12Q9NYV4 1490 aaPredicted RBP17.75■□□□□ 0.43
PRKD1-209ENST00000616995 MX1P20591 662 aa17.75■□□□□ 0.43
PRKD1-209ENST00000616995 PPP1R42Q7Z4L9 355 aa17.75■□□□□ 0.43
PRKD1-209ENST00000616995 RBM25P49756 843 aaKnown RBP17.74■□□□□ 0.43
PRKD1-209ENST00000616995 RTL1A6NKG5 1358 aa17.74■□□□□ 0.43
PRKD1-209ENST00000616995 RABEP1Q15276 862 aa17.73■□□□□ 0.43
PRKD1-209ENST00000616995 KIAA1211Q6ZU35 1233 aa17.73■□□□□ 0.43
PRKD1-209ENST00000616995 MED14O60244 1454 aa17.73■□□□□ 0.43
PRKD1-209ENST00000616995 PRPF40AO75400 957 aaKnown RBP17.73■□□□□ 0.43
PRKD1-209ENST00000616995 CHRNA2Q15822 529 aa17.73■□□□□ 0.43
PRKD1-209ENST00000616995 CAVIN1Q6NZI2 390 aaKnown RBP17.73■□□□□ 0.43
PRKD1-209ENST00000616995 SIRT1Q96EB6 747 aa17.73■□□□□ 0.43
PRKD1-209ENST00000616995 SBNO1A3KN83 1393 aa17.72■□□□□ 0.43
PRKD1-209ENST00000616995 PKP1Q13835 747 aa17.72■□□□□ 0.43
PRKD1-209ENST00000616995 ADAMTS13Q76LX8 1427 aa17.72■□□□□ 0.43
PRKD1-209ENST00000616995 NBPF7P0C2Y1 421 aaPredicted RBP17.71■□□□□ 0.43
PRKD1-209ENST00000616995 PLEKHO1Q53GL0 409 aaPredicted RBP17.71■□□□□ 0.43
PRKD1-209ENST00000616995 CWC27Q6UX04 472 aaKnown RBP17.71■□□□□ 0.43
PRKD1-209ENST00000616995 PTPRUQ92729 1446 aa17.71■□□□□ 0.43
PRKD1-209ENST00000616995 XRCC6P12956 609 aaKnown RBP eCLIP17.71■□□□□ 0.43
PRKD1-209ENST00000616995 BRPF1P55201 1214 aaPredicted RBP17.71■□□□□ 0.43
PRKD1-209ENST00000616995 PRAMEF22A3QJZ6 481 aa17.71■□□□□ 0.43
PRKD1-209ENST00000616995 NAP1L5Q96NT1 182 aaPredicted RBP17.71■□□□□ 0.43
PRKD1-209ENST00000616995 USP26Q9BXU7 913 aa17.71■□□□□ 0.43
PRKD1-209ENST00000616995 PA2G4Q9UQ80 394 aaKnown RBP17.71■□□□□ 0.43
PRKD1-209ENST00000616995 CWF19L2Q2TBE0 894 aaKnown RBP17.7■□□□□ 0.42
PRKD1-209ENST00000616995 ADGRB2O60241 1585 aa17.7■□□□□ 0.42
PRKD1-209ENST00000616995 PLEKHG1Q9ULL1 1385 aa17.7■□□□□ 0.42
PRKD1-209ENST00000616995 RAPGEF4Q8WZA2 1011 aa17.7■□□□□ 0.42
PRKD1-209ENST00000616995 PLCB2Q00722 1185 aa17.7■□□□□ 0.42
PRKD1-209ENST00000616995 RIC3Q7Z5B4 369 aa17.7■□□□□ 0.42
PRKD1-209ENST00000616995 SPG7Q9UQ90 795 aa17.69■□□□□ 0.42
PRKD1-209ENST00000616995 GCP02774 474 aa17.68■□□□□ 0.42
PRKD1-209ENST00000616995 ANKRD24Q8TF21 1146 aa17.68■□□□□ 0.42
PRKD1-209ENST00000616995 PTCH1Q13635 1447 aa17.68■□□□□ 0.42
PRKD1-209ENST00000616995 USP32Q8NFA0 1604 aa17.68■□□□□ 0.42
PRKD1-209ENST00000616995 UNC5CLQ8IV45 518 aa17.68■□□□□ 0.42
PRKD1-209ENST00000616995 KIF2CQ99661 725 aa17.68■□□□□ 0.42
PRKD1-209ENST00000616995 DNAAF4Q8WXU2 420 aa17.68■□□□□ 0.42
PRKD1-209ENST00000616995 IFIT2P09913 472 aaKnown RBP17.67■□□□□ 0.42
PRKD1-209ENST00000616995 USP44Q9H0E7 712 aa17.67■□□□□ 0.42
PRKD1-209ENST00000616995 GDPD2Q9HCC8 539 aa17.67■□□□□ 0.42
PRKD1-209ENST00000616995 DIAPH3Q9NSV4 1193 aa17.67■□□□□ 0.42
PRKD1-209ENST00000616995 MAP3K2Q9Y2U5 619 aa17.67■□□□□ 0.42
PRKD1-209ENST00000616995 MAP3K5Q99683 1374 aa17.66■□□□□ 0.42
PRKD1-209ENST00000616995 IGSF1Q8N6C5 1336 aa17.66■□□□□ 0.42
PRKD1-209ENST00000616995 ATP8B2P98198 1209 aa17.66■□□□□ 0.42
PRKD1-209ENST00000616995 RNF214Q8ND24 703 aa17.66■□□□□ 0.42
PRKD1-209ENST00000616995 SNX21Q969T3 373 aa17.66■□□□□ 0.42
PRKD1-209ENST00000616995 NAP1L2Q9ULW6 460 aaPredicted RBP17.66■□□□□ 0.42
PRKD1-209ENST00000616995 KRT28Q7Z3Y7 464 aa17.66■□□□□ 0.42
PRKD1-209ENST00000616995 MPNDQ8N594 471 aa17.66■□□□□ 0.42
PRKD1-209ENST00000616995 CCDC8Q9H0W5 538 aaPredicted RBP17.66■□□□□ 0.42
PRKD1-209ENST00000616995 GRPEL1Q9HAV7 217 aa17.66■□□□□ 0.42
PRKD1-209ENST00000616995 RBM27Q9P2N5 1060 aaKnown RBP17.65■□□□□ 0.42
PRKD1-209ENST00000616995 CPA1P15085 419 aa17.64■□□□□ 0.42
PRKD1-209ENST00000616995 ATF3P18847 181 aa17.64■□□□□ 0.42
PRKD1-209ENST00000616995 SPATA31D1Q6ZQQ2 1576 aa17.64■□□□□ 0.41
PRKD1-209ENST00000616995 BAG4O95429 457 aaKnown RBP17.64■□□□□ 0.41
PRKD1-209ENST00000616995 PROSER3Q2NL68 480 aa17.64■□□□□ 0.41
PRKD1-209ENST00000616995 CLASRPQ8N2M8 674 aaKnown RBP17.64■□□□□ 0.41
PRKD1-209ENST00000616995 KLHDC4Q8TBB5 520 aa17.64■□□□□ 0.41
PRKD1-209ENST00000616995 IP6K1Q92551 441 aa17.64■□□□□ 0.41
PRKD1-209ENST00000616995 PALD1Q9ULE6 856 aa17.64■□□□□ 0.41
PRKD1-209ENST00000616995 RHPN1Q8TCX5 695 aa17.63■□□□□ 0.41
PRKD1-209ENST00000616995 CDC42BPGQ6DT37 1551 aa17.63■□□□□ 0.41
PRKD1-209ENST00000616995 KIAA0232Q92628 1395 aa17.63■□□□□ 0.41
PRKD1-209ENST00000616995 AACSQ86V21 672 aa17.63■□□□□ 0.41
PRKD1-209ENST00000616995 ARHGEF10O15013 1369 aa17.62■□□□□ 0.41
PRKD1-209ENST00000616995 KIF20BQ96Q89 1820 aa17.62■□□□□ 0.41
PRKD1-209ENST00000616995 NUCB2P80303 420 aa17.62■□□□□ 0.41
PRKD1-209ENST00000616995 G3BP1Q13283 466 aaKnown RBP eCLIP17.62■□□□□ 0.41
PRKD1-209ENST00000616995 RAB3GAP1Q15042 981 aa17.62■□□□□ 0.41
PRKD1-209ENST00000616995 TTC5Q8N0Z6 440 aa17.62■□□□□ 0.41
PRKD1-209ENST00000616995 DLC1Q96QB1 1528 aa17.62■□□□□ 0.41
PRKD1-209ENST00000616995 KCNH5Q8NCM2 988 aa17.62■□□□□ 0.41
PRKD1-209ENST00000616995 ESYT1Q9BSJ8 1104 aa17.62■□□□□ 0.41
PRKD1-209ENST00000616995 AGLP35573 1532 aa17.61■□□□□ 0.41
PRKD1-209ENST00000616995 ATP5J2-PTCD1G3V325 749 aa17.61■□□□□ 0.41
PRKD1-209ENST00000616995 PTCD1O75127 700 aaKnown RBP17.61■□□□□ 0.41
PRKD1-209ENST00000616995 OVOS2A0A0J9YW53 1432 aa17.61■□□□□ 0.41
PRKD1-209ENST00000616995 OVOS2Q6IE36 1432 aa17.61■□□□□ 0.41
PRKD1-209ENST00000616995 MRE11P49959 708 aa17.61■□□□□ 0.41
PRKD1-209ENST00000616995 NFATC2IPQ8NCF5 419 aa17.6■□□□□ 0.41
PRKD1-209ENST00000616995 TMX3Q96JJ7 454 aa17.6■□□□□ 0.41
PRKD1-209ENST00000616995 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.6■□□□□ 0.41
PRKD1-209ENST00000616995 EIF4A1P60842 406 aaKnown RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms