RNA–Protein interactions for RNA: ENST00000616230.1

PCDHGC3-203, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 2

Gene PCDHGC3, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-203ENST00000616230 HMOX1P09601 288 aa16.58■□□□□ 0.24
PCDHGC3-203ENST00000616230 ARXQ96QS3 562 aa16.58■□□□□ 0.24
PCDHGC3-203ENST00000616230 FHDC1Q9C0D6 1143 aaPredicted RBP16.58■□□□□ 0.24
PCDHGC3-203ENST00000616230 ADAMTS7Q9UKP4 1686 aa16.58■□□□□ 0.24
PCDHGC3-203ENST00000616230 LINC00116Q8NCU8 138 aa16.57■□□□□ 0.24
PCDHGC3-203ENST00000616230 CICQ96RK0 1608 aaPredicted RBP16.56■□□□□ 0.24
PCDHGC3-203ENST00000616230 MAP3K5Q99683 1374 aa16.56■□□□□ 0.24
PCDHGC3-203ENST00000616230 CABP4P57796 275 aa16.56■□□□□ 0.24
PCDHGC3-203ENST00000616230 ITPK1Q13572 414 aa16.56■□□□□ 0.24
PCDHGC3-203ENST00000616230 AKAP4Q5JQC9 854 aa16.56■□□□□ 0.24
PCDHGC3-203ENST00000616230 FLAD1Q8NFF5 587 aa16.56■□□□□ 0.24
PCDHGC3-203ENST00000616230 AK7Q96M32 723 aa16.56■□□□□ 0.24
PCDHGC3-203ENST00000616230 SYT17Q9BSW7 474 aa16.56■□□□□ 0.24
PCDHGC3-203ENST00000616230 MRC1P22897 1456 aa16.55■□□□□ 0.24
PCDHGC3-203ENST00000616230 POLD1P28340 1107 aa16.55■□□□□ 0.24
PCDHGC3-203ENST00000616230 ATP6V1AP38606 617 aa16.55■□□□□ 0.24
PCDHGC3-203ENST00000616230 AMIGO3Q86WK7 504 aa16.55■□□□□ 0.24
PCDHGC3-203ENST00000616230 UTRNP46939 3433 aa16.55■□□□□ 0.24
PCDHGC3-203ENST00000616230 SLC4A9Q96Q91 983 aa16.54■□□□□ 0.24
PCDHGC3-203ENST00000616230 TJP1Q07157 1748 aa16.53■□□□□ 0.24
PCDHGC3-203ENST00000616230 MTHFSDQ2M296 383 aaKnown RBP16.53■□□□□ 0.24
PCDHGC3-203ENST00000616230 NFATC2IPQ8NCF5 419 aa16.53■□□□□ 0.24
PCDHGC3-203ENST00000616230 MYH14Q7Z406 1995 aaKnown RBP16.52■□□□□ 0.24
PCDHGC3-203ENST00000616230 U2SURPO15042 1029 aaKnown RBP16.52■□□□□ 0.24
PCDHGC3-203ENST00000616230 SSFA2P28290 1259 aa16.52■□□□□ 0.24
PCDHGC3-203ENST00000616230 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.51■□□□□ 0.23
PCDHGC3-203ENST00000616230 DCAF8L1A6NGE4 600 aa16.51■□□□□ 0.23
PCDHGC3-203ENST00000616230 RNMTO43148 476 aaKnown RBP16.51■□□□□ 0.23
PCDHGC3-203ENST00000616230 PPP2R1AP30153 589 aa16.51■□□□□ 0.23
PCDHGC3-203ENST00000616230 SMIM5Q71RC9 77 aa16.51■□□□□ 0.23
PCDHGC3-203ENST00000616230 CFAP53Q96M91 514 aa16.51■□□□□ 0.23
PCDHGC3-203ENST00000616230 RBM42Q9BTD8 480 aaKnown RBP16.51■□□□□ 0.23
PCDHGC3-203ENST00000616230 LGR6Q9HBX8 967 aa16.51■□□□□ 0.23
PCDHGC3-203ENST00000616230 GNPATO15228 680 aa16.5■□□□□ 0.23
PCDHGC3-203ENST00000616230 PHF14O94880 888 aa16.5■□□□□ 0.23
PCDHGC3-203ENST00000616230 MSL1Q68DK7 614 aa16.5■□□□□ 0.23
PCDHGC3-203ENST00000616230 SLC52A2Q9HAB3 445 aa16.5■□□□□ 0.23
PCDHGC3-203ENST00000616230 SIPA1L3O60292 1781 aaPredicted RBP16.5■□□□□ 0.23
PCDHGC3-203ENST00000616230 C4AP0C0L4 1744 aa16.5■□□□□ 0.23
PCDHGC3-203ENST00000616230 UBR2Q8IWV8 1755 aa16.49■□□□□ 0.23
PCDHGC3-203ENST00000616230 GOLGB1Q14789 3259 aaKnown RBP16.49■□□□□ 0.23
PCDHGC3-203ENST00000616230 CNTNAP4Q9C0A0 1308 aa16.48■□□□□ 0.23
PCDHGC3-203ENST00000616230 PTCD1O75127 700 aaKnown RBP16.48■□□□□ 0.23
PCDHGC3-203ENST00000616230 RC3H1Q5TC82 1133 aaKnown RBP16.48■□□□□ 0.23
PCDHGC3-203ENST00000616230 POTEDQ86YR6 584 aa16.48■□□□□ 0.23
PCDHGC3-203ENST00000616230 KCPQ6ZWJ8 1503 aa16.47■□□□□ 0.23
PCDHGC3-203ENST00000616230 RSPH6AQ9H0K4 717 aa16.47■□□□□ 0.23
PCDHGC3-203ENST00000616230 NUDCQ9Y266 331 aa16.47■□□□□ 0.23
PCDHGC3-203ENST00000616230 KLHL34Q8N239 644 aa16.46■□□□□ 0.23
PCDHGC3-203ENST00000616230 GAS2L2Q8NHY3 880 aa16.46■□□□□ 0.23
PCDHGC3-203ENST00000616230 RTCBQ9Y3I0 505 aaKnown RBP16.46■□□□□ 0.23
PCDHGC3-203ENST00000616230 CHD4Q14839 1912 aa16.46■□□□□ 0.23
PCDHGC3-203ENST00000616230 PRKAR2BP31323 418 aa16.44■□□□□ 0.22
PCDHGC3-203ENST00000616230 NLGN2Q8NFZ4 835 aa16.44■□□□□ 0.22
PCDHGC3-203ENST00000616230 GNAT3A8MTJ3 354 aa16.43■□□□□ 0.22
PCDHGC3-203ENST00000616230 RPS6KA4O75676 772 aa16.43■□□□□ 0.22
PCDHGC3-203ENST00000616230 CRKLP46109 303 aaKnown RBP16.43■□□□□ 0.22
PCDHGC3-203ENST00000616230 SLC39A6Q13433 755 aa16.43■□□□□ 0.22
PCDHGC3-203ENST00000616230 TRAPPC3LQ5T215 181 aa16.43■□□□□ 0.22
PCDHGC3-203ENST00000616230 PHACTR3Q96KR7 559 aa16.43■□□□□ 0.22
PCDHGC3-203ENST00000616230 U2AF1L5P0DN76 240 aaPredicted RBP16.42■□□□□ 0.22
PCDHGC3-203ENST00000616230 YY1P25490 414 aa16.42■□□□□ 0.22
PCDHGC3-203ENST00000616230 U2AF1Q01081 240 aaKnown RBP eCLIP16.42■□□□□ 0.22
PCDHGC3-203ENST00000616230 IL17REQ8NFR9 667 aa16.42■□□□□ 0.22
PCDHGC3-203ENST00000616230 ARHGEF1Q92888 912 aaKnown RBP16.42■□□□□ 0.22
PCDHGC3-203ENST00000616230 KIF13BQ9NQT8 1826 aa16.42■□□□□ 0.22
PCDHGC3-203ENST00000616230 CEMIPQ8WUJ3 1361 aa16.41■□□□□ 0.22
PCDHGC3-203ENST00000616230 FCHSD2O94868 740 aa16.41■□□□□ 0.22
PCDHGC3-203ENST00000616230 CD2APQ9Y5K6 639 aa16.41■□□□□ 0.22
PCDHGC3-203ENST00000616230 DLG5Q8TDM6 1919 aa16.41■□□□□ 0.22
PCDHGC3-203ENST00000616230 DNAJC10Q8IXB1 793 aa16.4■□□□□ 0.22
PCDHGC3-203ENST00000616230 RFC4P35249 363 aa16.39■□□□□ 0.21
PCDHGC3-203ENST00000616230 TEFQ10587 303 aa16.39■□□□□ 0.21
PCDHGC3-203ENST00000616230 VSIG10Q8N0Z9 540 aa16.39■□□□□ 0.21
PCDHGC3-203ENST00000616230 CYP19A1P11511 503 aaPredicted RBP16.38■□□□□ 0.21
PCDHGC3-203ENST00000616230 GYS1P13807 737 aa16.38■□□□□ 0.21
PCDHGC3-203ENST00000616230 GPR162Q16538 588 aa16.38■□□□□ 0.21
PCDHGC3-203ENST00000616230 INTS5Q6P9B9 1019 aaKnown RBP16.38■□□□□ 0.21
PCDHGC3-203ENST00000616230 KIAA1551Q9HCM1 1747 aa16.38■□□□□ 0.21
PCDHGC3-203ENST00000616230 MMP10P09238 476 aa16.37■□□□□ 0.21
PCDHGC3-203ENST00000616230 DDX10Q13206 875 aaKnown RBP16.37■□□□□ 0.21
PCDHGC3-203ENST00000616230 TTC5Q8N0Z6 440 aa16.37■□□□□ 0.21
PCDHGC3-203ENST00000616230 NLGN1Q8N2Q7 840 aa16.37■□□□□ 0.21
PCDHGC3-203ENST00000616230 CCDC87Q9NVE4 849 aa16.37■□□□□ 0.21
PCDHGC3-203ENST00000616230 RALBP1Q15311 655 aa16.36■□□□□ 0.21
PCDHGC3-203ENST00000616230 ZNF790Q6PG37 636 aa16.36■□□□□ 0.21
PCDHGC3-203ENST00000616230 SOS1Q07889 1333 aaPredicted RBP16.36■□□□□ 0.21
PCDHGC3-203ENST00000616230 PELP1Q8IZL8 1130 aaKnown RBP16.35■□□□□ 0.21
PCDHGC3-203ENST00000616230 USP42Q9H9J4 1324 aaKnown RBP16.35■□□□□ 0.21
PCDHGC3-203ENST00000616230 N4BP2Q86UW6 1770 aaPredicted RBP16.35■□□□□ 0.21
PCDHGC3-203ENST00000616230 HEG1Q9ULI3 1381 aa16.35■□□□□ 0.21
PCDHGC3-203ENST00000616230 YBX3P16989 372 aaKnown RBP eCLIP16.34■□□□□ 0.21
PCDHGC3-203ENST00000616230 ZNF496Q96IT1 587 aaPredicted RBP16.34■□□□□ 0.21
PCDHGC3-203ENST00000616230 SRP68Q9UHB9 627 aaKnown RBP16.34■□□□□ 0.21
PCDHGC3-203ENST00000616230 ZBTB1Q9Y2K1 713 aa16.34■□□□□ 0.21
PCDHGC3-203ENST00000616230 HTATSF1O43719 755 aaKnown RBP16.33■□□□□ 0.2
PCDHGC3-203ENST00000616230 RTF1Q92541 710 aaKnown RBP16.33■□□□□ 0.2
PCDHGC3-203ENST00000616230 PLEKHF1Q96S99 279 aa16.33■□□□□ 0.2
PCDHGC3-203ENST00000616230 COL15A1P39059 1388 aa16.33■□□□□ 0.2
PCDHGC3-203ENST00000616230 C10orf71Q711Q0 1435 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms