RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 SMARCC1Q92922 1105 aaPredicted RBP14.4□□□□□ -0.1
COL4A1-205ENST00000615732 WWC3Q9ULE0 1092 aa14.4□□□□□ -0.1
COL4A1-205ENST00000615732 SPG7Q9UQ90 795 aa14.4□□□□□ -0.1
COL4A1-205ENST00000615732 IGSF1Q8N6C5 1336 aa14.4□□□□□ -0.1
COL4A1-205ENST00000615732 MYBBP1AQ9BQG0 1328 aaKnown RBP14.4□□□□□ -0.1
COL4A1-205ENST00000615732 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.39□□□□□ -0.11
COL4A1-205ENST00000615732 EIF4A2Q14240 407 aaKnown RBP14.39□□□□□ -0.11
COL4A1-205ENST00000615732 NKX1-1Q15270 411 aaPredicted RBP14.39□□□□□ -0.11
COL4A1-205ENST00000615732 LINC00116Q8NCU8 138 aa14.39□□□□□ -0.11
COL4A1-205ENST00000615732 CICQ96RK0 1608 aaPredicted RBP14.38□□□□□ -0.11
COL4A1-205ENST00000615732 LOC102724428A0A0B4J2F2 783 aa14.38□□□□□ -0.11
COL4A1-205ENST00000615732 PHKG2P15735 406 aa14.38□□□□□ -0.11
COL4A1-205ENST00000615732 HMGB2P26583 209 aaKnown RBP14.38□□□□□ -0.11
COL4A1-205ENST00000615732 SIK1P57059 783 aa14.38□□□□□ -0.11
COL4A1-205ENST00000615732 ZNF526Q8TF50 670 aaPredicted RBP14.38□□□□□ -0.11
COL4A1-205ENST00000615732 GPBP1L1Q9HC44 474 aaPredicted RBP14.38□□□□□ -0.11
COL4A1-205ENST00000615732 TMOD3Q9NYL9 352 aa14.38□□□□□ -0.11
COL4A1-205ENST00000615732 ASAP1Q9ULH1 1129 aa14.38□□□□□ -0.11
COL4A1-205ENST00000615732 KNSTRNQ9Y448 316 aa14.38□□□□□ -0.11
COL4A1-205ENST00000615732 SSFA2P28290 1259 aa14.37□□□□□ -0.11
COL4A1-205ENST00000615732 KIAA1551Q9HCM1 1747 aa14.37□□□□□ -0.11
COL4A1-205ENST00000615732 ITPK1Q13572 414 aa14.36□□□□□ -0.11
COL4A1-205ENST00000615732 CCDC184Q52MB2 194 aa14.36□□□□□ -0.11
COL4A1-205ENST00000615732 CC2D1BQ5T0F9 858 aaKnown RBP14.36□□□□□ -0.11
COL4A1-205ENST00000615732 IFNL2Q8IZJ0 200 aa14.36□□□□□ -0.11
COL4A1-205ENST00000615732 FAM9BQ8IZU0 186 aa14.36□□□□□ -0.11
COL4A1-205ENST00000615732 GNPATO15228 680 aa14.35□□□□□ -0.11
COL4A1-205ENST00000615732 PER1O15534 1290 aaPredicted RBP14.35□□□□□ -0.11
COL4A1-205ENST00000615732 IFFO2Q5TF58 517 aa14.35□□□□□ -0.11
COL4A1-205ENST00000615732 KIF13BQ9NQT8 1826 aa14.35□□□□□ -0.11
COL4A1-205ENST00000615732 PXDNLA1KZ92 1463 aa14.34□□□□□ -0.11
COL4A1-205ENST00000615732 HNRNPUQ00839 825 aaKnown RBP eCLIP14.34□□□□□ -0.11
COL4A1-205ENST00000615732 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.34□□□□□ -0.11
COL4A1-205ENST00000615732 KDRP35968 1356 aa14.34□□□□□ -0.11
COL4A1-205ENST00000615732 HSPA6P17066 643 aa14.33□□□□□ -0.12
COL4A1-205ENST00000615732 ATP6V1AP38606 617 aa14.33□□□□□ -0.12
COL4A1-205ENST00000615732 ATG3Q9NT62 314 aa14.33□□□□□ -0.12
COL4A1-205ENST00000615732 KDM6AO15550 1401 aaPredicted RBP14.32□□□□□ -0.12
COL4A1-205ENST00000615732 COL5A3P25940 1745 aaPredicted RBP14.32□□□□□ -0.12
COL4A1-205ENST00000615732 N4BP2Q86UW6 1770 aaPredicted RBP14.32□□□□□ -0.12
COL4A1-205ENST00000615732 AEBP1Q8IUX7 1158 aa14.32□□□□□ -0.12
COL4A1-205ENST00000615732 ZNF831Q5JPB2 1677 aa14.32□□□□□ -0.12
COL4A1-205ENST00000615732 MMP10P09238 476 aa14.31□□□□□ -0.12
COL4A1-205ENST00000615732 ZNF530Q6P9A1 599 aaPredicted RBP14.31□□□□□ -0.12
COL4A1-205ENST00000615732 SLC4A9Q96Q91 983 aa14.31□□□□□ -0.12
COL4A1-205ENST00000615732 C10orf71Q711Q0 1435 aa14.31□□□□□ -0.12
COL4A1-205ENST00000615732 KIF3CO14782 793 aa14.3□□□□□ -0.12
COL4A1-205ENST00000615732 RBM42Q9BTD8 480 aaKnown RBP14.3□□□□□ -0.12
COL4A1-205ENST00000615732 GTF3C3Q9Y5Q9 886 aa14.3□□□□□ -0.12
COL4A1-205ENST00000615732 NPC1L1Q9UHC9 1359 aa14.3□□□□□ -0.12
COL4A1-205ENST00000615732 C4AP0C0L4 1744 aa14.29□□□□□ -0.12
COL4A1-205ENST00000615732 MORC1Q86VD1 984 aa14.29□□□□□ -0.12
COL4A1-205ENST00000615732 BRCA1P38398 1863 aaKnown RBP14.28□□□□□ -0.12
COL4A1-205ENST00000615732 AMER1Q5JTC6 1135 aaPredicted RBP14.28□□□□□ -0.12
COL4A1-205ENST00000615732 PLEKHG2Q9H7P9 1386 aa14.28□□□□□ -0.12
COL4A1-205ENST00000615732 PLEKHO1Q53GL0 409 aaPredicted RBP14.27□□□□□ -0.13
COL4A1-205ENST00000615732 DCAF5Q96JK2 942 aa14.27□□□□□ -0.13
COL4A1-205ENST00000615732 ERVV-2B6SEH9 535 aa14.26□□□□□ -0.13
COL4A1-205ENST00000615732 CABP4P57796 275 aa14.26□□□□□ -0.13
COL4A1-205ENST00000615732 SULT6B1Q6IMI4 303 aa14.26□□□□□ -0.13
COL4A1-205ENST00000615732 BCS1LQ9Y276 419 aa14.26□□□□□ -0.13
COL4A1-205ENST00000615732 RTCBQ9Y3I0 505 aaKnown RBP14.26□□□□□ -0.13
COL4A1-205ENST00000615732 CNTNAP4Q9C0A0 1308 aa14.25□□□□□ -0.13
COL4A1-205ENST00000615732 A0A0G2JLW4 131 aa14.25□□□□□ -0.13
COL4A1-205ENST00000615732 PTCD1O75127 700 aaKnown RBP14.25□□□□□ -0.13
COL4A1-205ENST00000615732 HSP90AB1P08238 724 aaKnown RBP14.25□□□□□ -0.13
COL4A1-205ENST00000615732 GYS1P13807 737 aa14.25□□□□□ -0.13
COL4A1-205ENST00000615732 TGFB2P61812 414 aa14.25□□□□□ -0.13
COL4A1-205ENST00000615732 C1orf141Q5JVX7 400 aa14.25□□□□□ -0.13
COL4A1-205ENST00000615732 TRAPPC3LQ5T215 181 aa14.25□□□□□ -0.13
COL4A1-205ENST00000615732 ARHGEF1Q92888 912 aaKnown RBP14.25□□□□□ -0.13
COL4A1-205ENST00000615732 TJP1Q07157 1748 aa14.24□□□□□ -0.13
COL4A1-205ENST00000615732 MYH14Q7Z406 1995 aaKnown RBP14.24□□□□□ -0.13
COL4A1-205ENST00000615732 MTHFSP49914 203 aa14.24□□□□□ -0.13
COL4A1-205ENST00000615732 AMOTQ4VCS5 1084 aa14.24□□□□□ -0.13
COL4A1-205ENST00000615732 PNISRQ8TF01 805 aaKnown RBP14.24□□□□□ -0.13
COL4A1-205ENST00000615732 ZBED9Q6R2W3 1325 aa14.23□□□□□ -0.13
COL4A1-205ENST00000615732 DPEP1P16444 411 aa14.23□□□□□ -0.13
COL4A1-205ENST00000615732 ADRA2BP18089 450 aa14.23□□□□□ -0.13
COL4A1-205ENST00000615732 PPP2R1AP30153 589 aa14.23□□□□□ -0.13
COL4A1-205ENST00000615732 IL13P35225 146 aa14.23□□□□□ -0.13
COL4A1-205ENST00000615732 RC3H1Q5TC82 1133 aaKnown RBP14.23□□□□□ -0.13
COL4A1-205ENST00000615732 NLGN1Q8N2Q7 840 aa14.23□□□□□ -0.13
COL4A1-205ENST00000615732 ARFGEF1Q9Y6D6 1849 aa14.22□□□□□ -0.13
COL4A1-205ENST00000615732 CCDC87Q9NVE4 849 aa14.22□□□□□ -0.13
COL4A1-205ENST00000615732 ADAMTS7Q9UKP4 1686 aa14.21□□□□□ -0.13
COL4A1-205ENST00000615732 RPS6KA4O75676 772 aa14.21□□□□□ -0.13
COL4A1-205ENST00000615732 RFC4P35249 363 aa14.21□□□□□ -0.13
COL4A1-205ENST00000615732 CRKLP46109 303 aaKnown RBP14.21□□□□□ -0.13
COL4A1-205ENST00000615732 NFATC2IPQ8NCF5 419 aa14.21□□□□□ -0.13
COL4A1-205ENST00000615732 NMRK2Q9NPI5 230 aa14.21□□□□□ -0.13
COL4A1-205ENST00000615732 SRP68Q9UHB9 627 aaKnown RBP14.21□□□□□ -0.13
COL4A1-205ENST00000615732 FCHSD2O94868 740 aa14.2□□□□□ -0.14
COL4A1-205ENST00000615732 HMOX1P09601 288 aa14.2□□□□□ -0.14
COL4A1-205ENST00000615732 KCNA3P22001 575 aa14.2□□□□□ -0.14
COL4A1-205ENST00000615732 ARHGAP27Q6ZUM4 889 aa14.2□□□□□ -0.14
COL4A1-205ENST00000615732 PARP3Q9Y6F1 533 aa14.2□□□□□ -0.14
COL4A1-205ENST00000615732 WDR90Q96KV7 1748 aa14.19□□□□□ -0.14
COL4A1-205ENST00000615732 TOMM70O94826 608 aa14.19□□□□□ -0.14
COL4A1-205ENST00000615732 APLP1P51693 650 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms