RNA–Protein interactions for RNA: ENST00000615301.4

SHTN1-207, Transcript of shootin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHTN1, Length 6,730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-207ENST00000615301 RNF216Q9NWF9 866 aaPredicted RBP11.49□□□□□ -0.57
SHTN1-207ENST00000615301 RAB11FIP3O75154 756 aa11.49□□□□□ -0.57
SHTN1-207ENST00000615301 EZRP15311 586 aaKnown RBP11.49□□□□□ -0.57
SHTN1-207ENST00000615301 TMC6Q7Z403 805 aa11.49□□□□□ -0.57
SHTN1-207ENST00000615301 BMP2KQ9NSY1 1161 aaPredicted RBP11.49□□□□□ -0.57
SHTN1-207ENST00000615301 LIG1P18858 919 aa11.49□□□□□ -0.57
SHTN1-207ENST00000615301 CCT2P78371 535 aaKnown RBP11.49□□□□□ -0.57
SHTN1-207ENST00000615301 KRT32Q14532 448 aa11.49□□□□□ -0.57
SHTN1-207ENST00000615301 SPA17Q15506 151 aa11.49□□□□□ -0.57
SHTN1-207ENST00000615301 SRRTQ9BXP5 876 aaKnown RBP11.49□□□□□ -0.57
SHTN1-207ENST00000615301 LMAN1P49257 510 aa11.49□□□□□ -0.57
SHTN1-207ENST00000615301 TXLNBQ8N3L3 684 aa11.49□□□□□ -0.57
SHTN1-207ENST00000615301 FAM107BQ9H098 131 aa11.49□□□□□ -0.57
SHTN1-207ENST00000615301 ABCF2Q9UG63 623 aa11.49□□□□□ -0.57
SHTN1-207ENST00000615301 NCOA2Q15596 1464 aa11.49□□□□□ -0.57
SHTN1-207ENST00000615301 CCDC178Q5BJE1 867 aa11.49□□□□□ -0.57
SHTN1-207ENST00000615301 SPG7Q9UQ90 795 aa11.49□□□□□ -0.57
SHTN1-207ENST00000615301 KIF21BO75037 1637 aa11.49□□□□□ -0.57
SHTN1-207ENST00000615301 RARSP54136 660 aaKnown RBP11.49□□□□□ -0.57
SHTN1-207ENST00000615301 RAB11FIP4Q86YS3 637 aa11.49□□□□□ -0.57
SHTN1-207ENST00000615301 GBP3Q9H0R5 595 aa11.49□□□□□ -0.57
SHTN1-207ENST00000615301 TATP17735 454 aaPredicted RBP11.48□□□□□ -0.57
SHTN1-207ENST00000615301 LUZP1Q86V48 1076 aa11.48□□□□□ -0.57
SHTN1-207ENST00000615301 CCDC8Q9H0W5 538 aaPredicted RBP11.48□□□□□ -0.57
SHTN1-207ENST00000615301 INCENPQ9NQS7 918 aa11.48□□□□□ -0.57
SHTN1-207ENST00000615301 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.48□□□□□ -0.57
SHTN1-207ENST00000615301 LRP2BPQ9P2M1 347 aa11.48□□□□□ -0.57
SHTN1-207ENST00000615301 CTNNA3Q9UI47 895 aa11.48□□□□□ -0.57
SHTN1-207ENST00000615301 IGF1RP08069 1367 aa11.48□□□□□ -0.57
SHTN1-207ENST00000615301 IMMTQ16891 758 aaKnown RBP11.48□□□□□ -0.57
SHTN1-207ENST00000615301 RBM5P52756 815 aaKnown RBP eCLIP11.48□□□□□ -0.57
SHTN1-207ENST00000615301 GBP2P32456 591 aaPredicted RBP11.48□□□□□ -0.57
SHTN1-207ENST00000615301 BTBD11A6QL63 1104 aa11.48□□□□□ -0.57
SHTN1-207ENST00000615301 AIDAQ96BJ3 306 aa11.48□□□□□ -0.57
SHTN1-207ENST00000615301 MACROD2A1Z1Q3 448 aa11.47□□□□□ -0.57
SHTN1-207ENST00000615301 KIF2AO00139 706 aaPredicted RBP11.47□□□□□ -0.57
SHTN1-207ENST00000615301 HCLS1P14317 486 aaPredicted RBP11.47□□□□□ -0.57
SHTN1-207ENST00000615301 IFFO1Q0D2I5 559 aa11.47□□□□□ -0.57
SHTN1-207ENST00000615301 NUP88Q99567 741 aaPredicted RBP11.47□□□□□ -0.57
SHTN1-207ENST00000615301 SCAND2PQ9GZW5 306 aaPredicted RBP11.47□□□□□ -0.57
SHTN1-207ENST00000615301 MATR3P43243 847 aaKnown RBP eCLIP11.47□□□□□ -0.57
SHTN1-207ENST00000615301 FSIP1Q8NA03 581 aa11.47□□□□□ -0.57
SHTN1-207ENST00000615301 STAC3Q96MF2 364 aa11.47□□□□□ -0.57
SHTN1-207ENST00000615301 UBA5Q9GZZ9 404 aa11.47□□□□□ -0.57
SHTN1-207ENST00000615301 CALCOCO1Q9P1Z2 691 aa11.47□□□□□ -0.57
SHTN1-207ENST00000615301 MINDY4BA8MYZ0 360 aa11.47□□□□□ -0.57
SHTN1-207ENST00000615301 UBE4AQ14139 1066 aa11.47□□□□□ -0.57
SHTN1-207ENST00000615301 ATP2C2O75185 946 aa11.47□□□□□ -0.57
SHTN1-207ENST00000615301 BICDL1Q6ZP65 573 aa11.47□□□□□ -0.57
SHTN1-207ENST00000615301 IGSF3O75054 1194 aa11.47□□□□□ -0.57
SHTN1-207ENST00000615301 BAG4O95429 457 aaKnown RBP11.47□□□□□ -0.57
SHTN1-207ENST00000615301 ZNF397Q8NF99 534 aaPredicted RBP11.47□□□□□ -0.57
SHTN1-207ENST00000615301 SMARCC1Q92922 1105 aaPredicted RBP11.47□□□□□ -0.57
SHTN1-207ENST00000615301 C8orf76Q96K31 380 aa11.47□□□□□ -0.57
SHTN1-207ENST00000615301 GPRASP1Q5JY77 1395 aa11.47□□□□□ -0.57
SHTN1-207ENST00000615301 DUSP27Q5VZP5 1158 aa11.46□□□□□ -0.57
SHTN1-207ENST00000615301 CACNA2D4Q7Z3S7 1137 aa11.46□□□□□ -0.57
SHTN1-207ENST00000615301 ZSCAN29Q8IWY8 852 aaPredicted RBP11.46□□□□□ -0.57
SHTN1-207ENST00000615301 ZNF76P36508 570 aa11.46□□□□□ -0.57
SHTN1-207ENST00000615301 ZSCAN25Q6NSZ9 544 aa11.46□□□□□ -0.57
SHTN1-207ENST00000615301 GIMAP6Q6P9H5 292 aa11.46□□□□□ -0.57
SHTN1-207ENST00000615301 HSP90AA4PQ58FG1 418 aa11.46□□□□□ -0.57
SHTN1-207ENST00000615301 WWC2Q6AWC2 1192 aa11.46□□□□□ -0.57
SHTN1-207ENST00000615301 ERBINQ96RT1 1412 aa11.46□□□□□ -0.57
SHTN1-207ENST00000615301 CFTRP13569 1480 aa11.46□□□□□ -0.57
SHTN1-207ENST00000615301 TDRD12Q587J7 1177 aaKnown RBP11.46□□□□□ -0.58
SHTN1-207ENST00000615301 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.46□□□□□ -0.58
SHTN1-207ENST00000615301 V9GYY5 206 aaPredicted RBP11.46□□□□□ -0.58
SHTN1-207ENST00000615301 GSTTP1A0A1W2PQM5 241 aa11.45□□□□□ -0.58
SHTN1-207ENST00000615301 GJB2P29033 226 aa11.45□□□□□ -0.58
SHTN1-207ENST00000615301 HLTFQ14527 1009 aaKnown RBP eCLIP11.45□□□□□ -0.58
SHTN1-207ENST00000615301 NFE2L2Q16236 605 aa11.45□□□□□ -0.58
SHTN1-207ENST00000615301 SPECC1Q5M775 1068 aa11.45□□□□□ -0.58
SHTN1-207ENST00000615301 KIF1BPQ96EK5 621 aa11.45□□□□□ -0.58
SHTN1-207ENST00000615301 WDR97A6NE52 1622 aa11.45□□□□□ -0.58
SHTN1-207ENST00000615301 IGHDP01880 384 aa11.45□□□□□ -0.58
SHTN1-207ENST00000615301 CCDC144CPQ8IYA2 1237 aa11.45□□□□□ -0.58
SHTN1-207ENST00000615301 CTNNBL1Q8WYA6 563 aaPredicted RBP11.45□□□□□ -0.58
SHTN1-207ENST00000615301 PPP1R1BQ9UD71 204 aaPredicted RBP11.45□□□□□ -0.58
SHTN1-207ENST00000615301 TBC1D9Q6ZT07 1266 aa11.45□□□□□ -0.58
SHTN1-207ENST00000615301 TOM1L2Q6ZVM7 507 aa11.45□□□□□ -0.58
SHTN1-207ENST00000615301 GLRX3O76003 335 aaKnown RBP11.45□□□□□ -0.58
SHTN1-207ENST00000615301 SNW1Q13573 536 aaKnown RBP11.45□□□□□ -0.58
SHTN1-207ENST00000615301 ZSCAN23Q3MJ62 389 aa11.45□□□□□ -0.58
SHTN1-207ENST00000615301 MAP9Q49MG5 647 aa11.45□□□□□ -0.58
SHTN1-207ENST00000615301 CNNM3Q8NE01 707 aa11.45□□□□□ -0.58
SHTN1-207ENST00000615301 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.45□□□□□ -0.58
SHTN1-207ENST00000615301 ANKRD30BQ9BXX2 1392 aa11.44□□□□□ -0.58
SHTN1-207ENST00000615301 ZNF165P49910 485 aa11.44□□□□□ -0.58
SHTN1-207ENST00000615301 LIMCH1Q9UPQ0 1083 aa11.44□□□□□ -0.58
SHTN1-207ENST00000615301 FAM69CQ0P6D2 419 aa11.44□□□□□ -0.58
SHTN1-207ENST00000615301 RRBP1Q9P2E9 1410 aaKnown RBP11.44□□□□□ -0.58
SHTN1-207ENST00000615301 POLR3DP05423 398 aaPredicted RBP11.44□□□□□ -0.58
SHTN1-207ENST00000615301 WASF1Q92558 559 aa11.44□□□□□ -0.58
SHTN1-207ENST00000615301 TRMT1LQ7Z2T5 733 aaKnown RBP11.44□□□□□ -0.58
SHTN1-207ENST00000615301 FYCO1Q9BQS8 1478 aa11.44□□□□□ -0.58
SHTN1-207ENST00000615301 FKBP15Q5T1M5 1219 aa11.44□□□□□ -0.58
SHTN1-207ENST00000615301 CTR9Q6PD62 1173 aa11.44□□□□□ -0.58
SHTN1-207ENST00000615301 U3KPZ7 1027 aaPredicted RBP11.44□□□□□ -0.58
SHTN1-207ENST00000615301 RAD54L2Q9Y4B4 1467 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms