RNA–Protein interactions for RNA: ENST00000615088.1

AL109954.3-201, humanhuman

BASIC

Gene AL109954.3, Length 558 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL109954.3-201ENST00000615088 KDM6AO15550 1401 aaPredicted RBP17.19■□□□□ 0.34
AL109954.3-201ENST00000615088 C4BP0C0L5 1744 aa17.18■□□□□ 0.34
AL109954.3-201ENST00000615088 PHF14O94880 888 aa17.18■□□□□ 0.34
AL109954.3-201ENST00000615088 AKAP4Q5JQC9 854 aa17.18■□□□□ 0.34
AL109954.3-201ENST00000615088 LINC00116Q8NCU8 138 aa17.18■□□□□ 0.34
AL109954.3-201ENST00000615088 RBM42Q9BTD8 480 aaKnown RBP17.18■□□□□ 0.34
AL109954.3-201ENST00000615088 SSFA2P28290 1259 aa17.17■□□□□ 0.34
AL109954.3-201ENST00000615088 MSL1Q68DK7 614 aa17.17■□□□□ 0.34
AL109954.3-201ENST00000615088 CFAP53Q96M91 514 aa17.17■□□□□ 0.34
AL109954.3-201ENST00000615088 U2SURPO15042 1029 aaKnown RBP17.16■□□□□ 0.34
AL109954.3-201ENST00000615088 GNPATO15228 680 aa17.16■□□□□ 0.34
AL109954.3-201ENST00000615088 YY1P25490 414 aa17.16■□□□□ 0.34
AL109954.3-201ENST00000615088 ITPK1Q13572 414 aa17.16■□□□□ 0.34
AL109954.3-201ENST00000615088 TAF1LQ8IZX4 1826 aa17.16■□□□□ 0.34
AL109954.3-201ENST00000615088 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.15■□□□□ 0.34
AL109954.3-201ENST00000615088 NFATC2IPQ8NCF5 419 aa17.15■□□□□ 0.34
AL109954.3-201ENST00000615088 COL24A1Q17RW2 1714 aa17.13■□□□□ 0.33
AL109954.3-201ENST00000615088 COL3A1P02461 1466 aaPredicted RBP17.12■□□□□ 0.33
AL109954.3-201ENST00000615088 PTCD1O75127 700 aaKnown RBP17.12■□□□□ 0.33
AL109954.3-201ENST00000615088 MTHFSDQ2M296 383 aaKnown RBP17.12■□□□□ 0.33
AL109954.3-201ENST00000615088 NUDCQ9Y266 331 aa17.12■□□□□ 0.33
AL109954.3-201ENST00000615088 RTCBQ9Y3I0 505 aaKnown RBP17.12■□□□□ 0.33
AL109954.3-201ENST00000615088 RNMTO43148 476 aaKnown RBP17.11■□□□□ 0.33
AL109954.3-201ENST00000615088 GPR162Q16538 588 aa17.11■□□□□ 0.33
AL109954.3-201ENST00000615088 RC3H1Q5TC82 1133 aaKnown RBP17.11■□□□□ 0.33
AL109954.3-201ENST00000615088 SMIM5Q71RC9 77 aa17.11■□□□□ 0.33
AL109954.3-201ENST00000615088 AMIGO3Q86WK7 504 aa17.11■□□□□ 0.33
AL109954.3-201ENST00000615088 SLC4A9Q96Q91 983 aa17.11■□□□□ 0.33
AL109954.3-201ENST00000615088 SLC52A2Q9HAB3 445 aa17.11■□□□□ 0.33
AL109954.3-201ENST00000615088 CNTNAP4Q9C0A0 1308 aa17.11■□□□□ 0.33
AL109954.3-201ENST00000615088 TRAPPC3LQ5T215 181 aa17.1■□□□□ 0.33
AL109954.3-201ENST00000615088 GAS2L2Q8NHY3 880 aa17.1■□□□□ 0.33
AL109954.3-201ENST00000615088 ZNF831Q5JPB2 1677 aa17.1■□□□□ 0.33
AL109954.3-201ENST00000615088 ADRA2BP18089 450 aa17.09■□□□□ 0.33
AL109954.3-201ENST00000615088 PELP1Q8IZL8 1130 aaKnown RBP17.09■□□□□ 0.33
AL109954.3-201ENST00000615088 LGR6Q9HBX8 967 aa17.09■□□□□ 0.33
AL109954.3-201ENST00000615088 UBR3Q6ZT12 1888 aa17.09■□□□□ 0.33
AL109954.3-201ENST00000615088 RPS6KA4O75676 772 aa17.08■□□□□ 0.32
AL109954.3-201ENST00000615088 PPP2R1AP30153 589 aa17.08■□□□□ 0.32
AL109954.3-201ENST00000615088 NLGN2Q8NFZ4 835 aa17.08■□□□□ 0.32
AL109954.3-201ENST00000615088 CD2APQ9Y5K6 639 aa17.08■□□□□ 0.32
AL109954.3-201ENST00000615088 SCN11AQ9UI33 1791 aa17.07■□□□□ 0.32
AL109954.3-201ENST00000615088 MRC1P22897 1456 aa17.06■□□□□ 0.32
AL109954.3-201ENST00000615088 RFC4P35249 363 aa17.06■□□□□ 0.32
AL109954.3-201ENST00000615088 GNAT3A8MTJ3 354 aa17.05■□□□□ 0.32
AL109954.3-201ENST00000615088 U2AF1L5P0DN76 240 aaPredicted RBP17.05■□□□□ 0.32
AL109954.3-201ENST00000615088 PRKAR2BP31323 418 aa17.05■□□□□ 0.32
AL109954.3-201ENST00000615088 CRKLP46109 303 aaKnown RBP17.05■□□□□ 0.32
AL109954.3-201ENST00000615088 U2AF1Q01081 240 aaKnown RBP eCLIP17.05■□□□□ 0.32
AL109954.3-201ENST00000615088 ARHGEF1Q92888 912 aaKnown RBP17.05■□□□□ 0.32
AL109954.3-201ENST00000615088 TEFQ10587 303 aa17.04■□□□□ 0.32
AL109954.3-201ENST00000615088 SLC39A6Q13433 755 aa17.04■□□□□ 0.32
AL109954.3-201ENST00000615088 TTC5Q8N0Z6 440 aa17.04■□□□□ 0.32
AL109954.3-201ENST00000615088 NLGN1Q8N2Q7 840 aa17.04■□□□□ 0.32
AL109954.3-201ENST00000615088 MMP10P09238 476 aa17.03■□□□□ 0.32
AL109954.3-201ENST00000615088 RSPH6AQ9H0K4 717 aa17.03■□□□□ 0.32
AL109954.3-201ENST00000615088 COL5A3P25940 1745 aaPredicted RBP17.02■□□□□ 0.32
AL109954.3-201ENST00000615088 GRIN3BO60391 1043 aa17.02■□□□□ 0.32
AL109954.3-201ENST00000615088 DNAJC10Q8IXB1 793 aa17.02■□□□□ 0.32
AL109954.3-201ENST00000615088 VSIG10Q8N0Z9 540 aa17.01■□□□□ 0.31
AL109954.3-201ENST00000615088 CCDC87Q9NVE4 849 aa17.01■□□□□ 0.31
AL109954.3-201ENST00000615088 ADAMTS7Q9UKP4 1686 aa17.01■□□□□ 0.31
AL109954.3-201ENST00000615088 FCHSD2O94868 740 aa17■□□□□ 0.31
AL109954.3-201ENST00000615088 IL17REQ8NFR9 667 aa17■□□□□ 0.31
AL109954.3-201ENST00000615088 PHACTR3Q96KR7 559 aa17■□□□□ 0.31
AL109954.3-201ENST00000615088 CICQ96RK0 1608 aaPredicted RBP16.99■□□□□ 0.31
AL109954.3-201ENST00000615088 TJP1Q07157 1748 aa16.99■□□□□ 0.31
AL109954.3-201ENST00000615088 NEFMP07197 916 aa16.99■□□□□ 0.31
AL109954.3-201ENST00000615088 GYS1P13807 737 aa16.99■□□□□ 0.31
AL109954.3-201ENST00000615088 INTS5Q6P9B9 1019 aaKnown RBP16.99■□□□□ 0.31
AL109954.3-201ENST00000615088 RTF1Q92541 710 aaKnown RBP16.99■□□□□ 0.31
AL109954.3-201ENST00000615088 PARP3Q9Y6F1 533 aa16.99■□□□□ 0.31
AL109954.3-201ENST00000615088 KCPQ6ZWJ8 1503 aa16.98■□□□□ 0.31
AL109954.3-201ENST00000615088 CYP19A1P11511 503 aaPredicted RBP16.98■□□□□ 0.31
AL109954.3-201ENST00000615088 STARD3NLO95772 234 aa16.97■□□□□ 0.31
AL109954.3-201ENST00000615088 YBX3P16989 372 aaKnown RBP eCLIP16.97■□□□□ 0.31
AL109954.3-201ENST00000615088 USP42Q9H9J4 1324 aaKnown RBP16.96■□□□□ 0.31
AL109954.3-201ENST00000615088 ZPR1O75312 459 aa16.96■□□□□ 0.31
AL109954.3-201ENST00000615088 ZNF790Q6PG37 636 aa16.96■□□□□ 0.31
AL109954.3-201ENST00000615088 TEX13AQ9BXU3 409 aaPredicted RBP16.96■□□□□ 0.31
AL109954.3-201ENST00000615088 SRP68Q9UHB9 627 aaKnown RBP16.96■□□□□ 0.31
AL109954.3-201ENST00000615088 SOS1Q07889 1333 aaPredicted RBP16.96■□□□□ 0.3
AL109954.3-201ENST00000615088 CEMIPQ8WUJ3 1361 aa16.95■□□□□ 0.3
AL109954.3-201ENST00000615088 BTBD11A6QL63 1104 aa16.95■□□□□ 0.3
AL109954.3-201ENST00000615088 ZNF784Q8NCA9 323 aaPredicted RBP16.95■□□□□ 0.3
AL109954.3-201ENST00000615088 FMNL2Q96PY5 1086 aa16.95■□□□□ 0.3
AL109954.3-201ENST00000615088 VIRMAQ69YN4 1812 aaKnown RBP16.94■□□□□ 0.3
AL109954.3-201ENST00000615088 HEG1Q9ULI3 1381 aa16.94■□□□□ 0.3
AL109954.3-201ENST00000615088 TGFB2P61812 414 aa16.94■□□□□ 0.3
AL109954.3-201ENST00000615088 RALBP1Q15311 655 aa16.94■□□□□ 0.3
AL109954.3-201ENST00000615088 ZNF496Q96IT1 587 aaPredicted RBP16.94■□□□□ 0.3
AL109954.3-201ENST00000615088 ZBTB1Q9Y2K1 713 aa16.94■□□□□ 0.3
AL109954.3-201ENST00000615088 MYH14Q7Z406 1995 aaKnown RBP16.94■□□□□ 0.3
AL109954.3-201ENST00000615088 C4AP0C0L4 1744 aa16.93■□□□□ 0.3
AL109954.3-201ENST00000615088 COL15A1P39059 1388 aa16.93■□□□□ 0.3
AL109954.3-201ENST00000615088 HTATSF1O43719 755 aaKnown RBP16.93■□□□□ 0.3
AL109954.3-201ENST00000615088 CANXP27824 592 aaKnown RBP16.93■□□□□ 0.3
AL109954.3-201ENST00000615088 FKBP8Q14318 412 aa16.93■□□□□ 0.3
AL109954.3-201ENST00000615088 PNNQ9H307 717 aaKnown RBP16.93■□□□□ 0.3
AL109954.3-201ENST00000615088 C10orf71Q711Q0 1435 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms