RNA–Protein interactions for RNA: ENST00000615043.1

PCDH15-228, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 1,143 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-228ENST00000615043 USP47Q96K76 1375 aa13.41□□□□□ -0.26
PCDH15-228ENST00000615043 LMTK3Q96Q04 1460 aa13.41□□□□□ -0.26
PCDH15-228ENST00000615043 ADGRB1O14514 1584 aa13.41□□□□□ -0.26
PCDH15-228ENST00000615043 CFHP08603 1231 aa13.4□□□□□ -0.26
PCDH15-228ENST00000615043 SAMD7Q7Z3H4 446 aa13.4□□□□□ -0.26
PCDH15-228ENST00000615043 CFAP99D6REC4 459 aa13.39□□□□□ -0.27
PCDH15-228ENST00000615043 WASHC4Q2M389 1173 aa13.39□□□□□ -0.27
PCDH15-228ENST00000615043 LRRN4Q8WUT4 740 aa13.39□□□□□ -0.27
PCDH15-228ENST00000615043 EIF4G2P78344 907 aaKnown RBP eCLIP13.38□□□□□ -0.27
PCDH15-228ENST00000615043 HDGFL1Q5TGJ6 251 aa13.38□□□□□ -0.27
PCDH15-228ENST00000615043 ANKLE2Q86XL3 938 aa13.38□□□□□ -0.27
PCDH15-228ENST00000615043 RETREG2Q8NC44 543 aa13.38□□□□□ -0.27
PCDH15-228ENST00000615043 HSPA5P11021 654 aaKnown RBP13.37□□□□□ -0.27
PCDH15-228ENST00000615043 ATP6V1AP38606 617 aa13.37□□□□□ -0.27
PCDH15-228ENST00000615043 TMEM132EQ6IEE7 984 aa13.37□□□□□ -0.27
PCDH15-228ENST00000615043 VPS9D1Q9Y2B5 631 aa13.37□□□□□ -0.27
PCDH15-228ENST00000615043 ADAMTS13Q76LX8 1427 aa13.37□□□□□ -0.27
PCDH15-228ENST00000615043 DIP2AQ14689 1571 aa13.37□□□□□ -0.27
PCDH15-228ENST00000615043 GPR37L1O60883 481 aa13.36□□□□□ -0.27
PCDH15-228ENST00000615043 LAPTM4BQ86VI4 370 aa13.36□□□□□ -0.27
PCDH15-228ENST00000615043 HIRIP3Q9BW71 556 aaPredicted RBP13.36□□□□□ -0.27
PCDH15-228ENST00000615043 EIF3AQ14152 1382 aaKnown RBP13.35□□□□□ -0.27
PCDH15-228ENST00000615043 RNF40O75150 1001 aa13.35□□□□□ -0.27
PCDH15-228ENST00000615043 PBX2P40425 430 aa13.35□□□□□ -0.27
PCDH15-228ENST00000615043 HSPA2P54652 639 aa13.35□□□□□ -0.27
PCDH15-228ENST00000615043 ADAMTS19Q8TE59 1207 aa13.35□□□□□ -0.27
PCDH15-228ENST00000615043 OTUD5Q96G74 571 aa13.35□□□□□ -0.27
PCDH15-228ENST00000615043 ARHGEF28Q8N1W1 1705 aaKnown RBP13.34□□□□□ -0.27
PCDH15-228ENST00000615043 NPHP4O75161 1426 aaPredicted RBP13.34□□□□□ -0.27
PCDH15-228ENST00000615043 YTHDC2Q9H6S0 1430 aaKnown RBP13.34□□□□□ -0.27
PCDH15-228ENST00000615043 SYMPKQ92797 1274 aaKnown RBP13.34□□□□□ -0.27
PCDH15-228ENST00000615043 MED14O60244 1454 aa13.34□□□□□ -0.27
PCDH15-228ENST00000615043 METP08581 1390 aa13.33□□□□□ -0.27
PCDH15-228ENST00000615043 VAC14Q08AM6 782 aa13.33□□□□□ -0.28
PCDH15-228ENST00000615043 KCTD17Q8N5Z5 321 aa13.33□□□□□ -0.28
PCDH15-228ENST00000615043 SLC26A8Q96RN1 970 aa13.33□□□□□ -0.28
PCDH15-228ENST00000615043 NBPF3Q9H094 633 aa13.33□□□□□ -0.28
PCDH15-228ENST00000615043 KMT5BQ4FZB7 885 aa13.32□□□□□ -0.28
PCDH15-228ENST00000615043 PRR7Q8TB68 274 aa13.32□□□□□ -0.28
PCDH15-228ENST00000615043 EPS8L1Q8TE68 723 aa13.32□□□□□ -0.28
PCDH15-228ENST00000615043 STK26Q9P289 416 aa13.32□□□□□ -0.28
PCDH15-228ENST00000615043 TRAK1Q9UPV9 953 aa13.32□□□□□ -0.28
PCDH15-228ENST00000615043 KNDC1Q76NI1 1749 aa13.32□□□□□ -0.28
PCDH15-228ENST00000615043 ST20-MTHFSA0A0A6YYL1 179 aa13.31□□□□□ -0.28
PCDH15-228ENST00000615043 LRPPRCP42704 1394 aaKnown RBP13.31□□□□□ -0.28
PCDH15-228ENST00000615043 QRICH2Q9H0J4 1663 aa13.31□□□□□ -0.28
PCDH15-228ENST00000615043 TBX22Q9Y458 520 aa13.3□□□□□ -0.28
PCDH15-228ENST00000615043 STRCQ7RTU9 1775 aa13.3□□□□□ -0.28
PCDH15-228ENST00000615043 DLC1Q96QB1 1528 aa13.29□□□□□ -0.28
PCDH15-228ENST00000615043 AEBP1Q8IUX7 1158 aa13.29□□□□□ -0.28
PCDH15-228ENST00000615043 ZFRQ96KR1 1074 aaKnown RBP13.29□□□□□ -0.28
PCDH15-228ENST00000615043 CPS1P31327 1500 aa13.29□□□□□ -0.28
PCDH15-228ENST00000615043 XRN1Q8IZH2 1706 aaKnown RBP13.28□□□□□ -0.28
PCDH15-228ENST00000615043 ZNF687Q8N1G0 1237 aa13.28□□□□□ -0.28
PCDH15-228ENST00000615043 ABCC11Q96J66 1382 aa13.28□□□□□ -0.28
PCDH15-228ENST00000615043 TECPR2O15040 1411 aa13.28□□□□□ -0.28
PCDH15-228ENST00000615043 PTPRUQ92729 1446 aa13.28□□□□□ -0.28
PCDH15-228ENST00000615043 BHMG1C9JSJ3 638 aaPredicted RBP13.27□□□□□ -0.29
PCDH15-228ENST00000615043 RFX1P22670 979 aa13.27□□□□□ -0.29
PCDH15-228ENST00000615043 EMP3P54852 163 aa13.27□□□□□ -0.29
PCDH15-228ENST00000615043 NR6A1Q15406 480 aa13.27□□□□□ -0.29
PCDH15-228ENST00000615043 RETREG3Q86VR2 466 aa13.27□□□□□ -0.29
PCDH15-228ENST00000615043 PBXIP1Q96AQ6 731 aa13.27□□□□□ -0.29
PCDH15-228ENST00000615043 CCDC9Q9Y3X0 531 aaKnown RBP13.27□□□□□ -0.29
PCDH15-228ENST00000615043 CENPJQ9HC77 1338 aaPredicted RBP13.27□□□□□ -0.29
PCDH15-228ENST00000615043 PIK3R4Q99570 1358 aa13.27□□□□□ -0.29
PCDH15-228ENST00000615043 MORN1Q5T089 497 aa13.26□□□□□ -0.29
PCDH15-228ENST00000615043 ALG2Q9H553 416 aa13.26□□□□□ -0.29
PCDH15-228ENST00000615043 CHD2O14647 1828 aaKnown RBP13.25□□□□□ -0.29
PCDH15-228ENST00000615043 PER1O15534 1290 aaPredicted RBP13.25□□□□□ -0.29
PCDH15-228ENST00000615043 PUS10Q3MIT2 529 aaKnown RBP13.25□□□□□ -0.29
PCDH15-228ENST00000615043 PRAM1Q96QH2 718 aa13.25□□□□□ -0.29
PCDH15-228ENST00000615043 TESK2Q96S53 571 aa13.25□□□□□ -0.29
PCDH15-228ENST00000615043 NWD1Q149M9 1564 aa13.24□□□□□ -0.29
PCDH15-228ENST00000615043 PTCH1Q13635 1447 aa13.24□□□□□ -0.29
PCDH15-228ENST00000615043 ACTN4O43707 911 aaKnown RBP13.24□□□□□ -0.29
PCDH15-228ENST00000615043 PDE4CQ08493 712 aa13.24□□□□□ -0.29
PCDH15-228ENST00000615043 SAFB2Q14151 953 aaKnown RBP eCLIP13.24□□□□□ -0.29
PCDH15-228ENST00000615043 PPP1R12CQ9BZL4 782 aa13.24□□□□□ -0.29
PCDH15-228ENST00000615043 POGKQ9P215 609 aa13.24□□□□□ -0.29
PCDH15-228ENST00000615043 SLC27A5Q9Y2P5 690 aa13.24□□□□□ -0.29
PCDH15-228ENST00000615043 FAM135BQ49AJ0 1406 aa13.23□□□□□ -0.29
PCDH15-228ENST00000615043 CCDC7Q96M83 1385 aa13.23□□□□□ -0.29
PCDH15-228ENST00000615043 ROBO2Q9HCK4 1378 aa13.23□□□□□ -0.29
PCDH15-228ENST00000615043 DISP3Q9P2K9 1392 aa13.23□□□□□ -0.29
PCDH15-228ENST00000615043 PLEKHH1Q9ULM0 1364 aa13.23□□□□□ -0.29
PCDH15-228ENST00000615043 SBNO2Q9Y2G9 1366 aa13.23□□□□□ -0.29
PCDH15-228ENST00000615043 ST18O60284 1047 aa13.23□□□□□ -0.29
PCDH15-228ENST00000615043 Q3C1V9 767 aa13.23□□□□□ -0.29
PCDH15-228ENST00000615043 MRPL50Q8N5N7 158 aaKnown RBP13.23□□□□□ -0.29
PCDH15-228ENST00000615043 MARVELD3Q96A59 401 aa13.23□□□□□ -0.29
PCDH15-228ENST00000615043 AMOTL2Q9Y2J4 779 aa13.23□□□□□ -0.29
PCDH15-228ENST00000615043 KIF7Q2M1P5 1343 aa13.22□□□□□ -0.29
PCDH15-228ENST00000615043 WASHC2AQ641Q2 1341 aa13.22□□□□□ -0.29
PCDH15-228ENST00000615043 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.22□□□□□ -0.29
PCDH15-228ENST00000615043 FAM205CA6NFA0 338 aa13.22□□□□□ -0.29
PCDH15-228ENST00000615043 C11orf95C9JLR9 678 aaPredicted RBP13.22□□□□□ -0.29
PCDH15-228ENST00000615043 TK2O00142 265 aa13.22□□□□□ -0.29
PCDH15-228ENST00000615043 TMF1P82094 1093 aa13.22□□□□□ -0.29
PCDH15-228ENST00000615043 WAPLQ7Z5K2 1190 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms