RNA–Protein interactions for RNA: ENST00000614775.4

SMIM20-205, Transcript of small integral membrane protein 20, humanhuman

TSL 5 BASIC

Gene SMIM20, Length 1,190 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20-205ENST00000614775 SIK1P57059 783 aa25.61■■□□□ 1.69
SMIM20-205ENST00000614775 TNRC6CQ9HCJ0 1690 aaKnown RBP25.6■■□□□ 1.69
SMIM20-205ENST00000614775 ARFGEF1Q9Y6D6 1849 aa25.6■■□□□ 1.69
SMIM20-205ENST00000614775 RRAGCQ9HB90 399 aa25.59■■□□□ 1.69
SMIM20-205ENST00000614775 SMG6Q86US8 1419 aaKnown RBP25.59■■□□□ 1.69
SMIM20-205ENST00000614775 SLC34A2O95436 690 aa25.58■■□□□ 1.69
SMIM20-205ENST00000614775 ITPK1Q13572 414 aa25.58■■□□□ 1.69
SMIM20-205ENST00000614775 RRS1Q15050 365 aaKnown RBP25.58■■□□□ 1.69
SMIM20-205ENST00000614775 SMC1BQ8NDV3 1235 aa25.57■■□□□ 1.68
SMIM20-205ENST00000614775 C4AP0C0L4 1744 aa25.55■■□□□ 1.68
SMIM20-205ENST00000614775 KCNA3P22001 575 aa25.55■■□□□ 1.68
SMIM20-205ENST00000614775 NLGN1Q8N2Q7 840 aa25.55■■□□□ 1.68
SMIM20-205ENST00000614775 PUS7Q96PZ0 661 aaKnown RBP25.54■■□□□ 1.68
SMIM20-205ENST00000614775 CCDC87Q9NVE4 849 aa25.54■■□□□ 1.68
SMIM20-205ENST00000614775 TMF1P82094 1093 aa25.53■■□□□ 1.68
SMIM20-205ENST00000614775 RNF181Q9P0P0 153 aa25.53■■□□□ 1.68
SMIM20-205ENST00000614775 ATP6V1AP38606 617 aa25.52■■□□□ 1.68
SMIM20-205ENST00000614775 NKX1-1Q15270 411 aaPredicted RBP25.52■■□□□ 1.68
SMIM20-205ENST00000614775 DCAF5Q96JK2 942 aa25.51■■□□□ 1.67
SMIM20-205ENST00000614775 ASAP1Q9ULH1 1129 aa25.51■■□□□ 1.67
SMIM20-205ENST00000614775 INSRP06213 1382 aa25.5■■□□□ 1.67
SMIM20-205ENST00000614775 HSP90AB2PQ58FF8 381 aa25.5■■□□□ 1.67
SMIM20-205ENST00000614775 SBF1O95248 1867 aa25.49■■□□□ 1.67
SMIM20-205ENST00000614775 TRAPPC3LQ5T215 181 aa25.49■■□□□ 1.67
SMIM20-205ENST00000614775 PIM2Q9P1W9 311 aa25.49■■□□□ 1.67
SMIM20-205ENST00000614775 RTCBQ9Y3I0 505 aaKnown RBP25.48■■□□□ 1.67
SMIM20-205ENST00000614775 SIN3AQ96ST3 1273 aa25.47■■□□□ 1.67
SMIM20-205ENST00000614775 CARD11Q9BXL7 1154 aa25.47■■□□□ 1.67
SMIM20-205ENST00000614775 TMOD3Q9NYL9 352 aa25.47■■□□□ 1.67
SMIM20-205ENST00000614775 PARP3Q9Y6F1 533 aa25.47■■□□□ 1.67
SMIM20-205ENST00000614775 GYS1P13807 737 aa25.46■■□□□ 1.67
SMIM20-205ENST00000614775 DALRD3Q5D0E6 543 aaKnown RBP25.46■■□□□ 1.67
SMIM20-205ENST00000614775 ARHGEF1Q92888 912 aaKnown RBP25.46■■□□□ 1.67
SMIM20-205ENST00000614775 ATG3Q9NT62 314 aa25.44■■□□□ 1.66
SMIM20-205ENST00000614775 FLT4P35916 1363 aa25.44■■□□□ 1.66
SMIM20-205ENST00000614775 KDRP35968 1356 aa25.44■■□□□ 1.66
SMIM20-205ENST00000614775 ADRA2BP18089 450 aa25.43■■□□□ 1.66
SMIM20-205ENST00000614775 FYB1O15117 783 aa25.42■■□□□ 1.66
SMIM20-205ENST00000614775 GGNBP2Q9H3C7 697 aa25.42■■□□□ 1.66
SMIM20-205ENST00000614775 SPG7Q9UQ90 795 aa25.42■■□□□ 1.66
SMIM20-205ENST00000614775 NCAPD2Q15021 1401 aa25.42■■□□□ 1.66
SMIM20-205ENST00000614775 ZNF831Q5JPB2 1677 aa25.41■■□□□ 1.66
SMIM20-205ENST00000614775 KIF24Q5T7B8 1368 aa25.41■■□□□ 1.66
SMIM20-205ENST00000614775 ZC3H4Q9UPT8 1303 aaKnown RBP25.4■■□□□ 1.66
SMIM20-205ENST00000614775 RFC4P35249 363 aa25.4■■□□□ 1.66
SMIM20-205ENST00000614775 COL5A3P25940 1745 aaPredicted RBP25.4■■□□□ 1.66
SMIM20-205ENST00000614775 VEGFAP15692 232 aaPredicted RBP25.39■■□□□ 1.66
SMIM20-205ENST00000614775 SLC4A9Q96Q91 983 aa25.39■■□□□ 1.66
SMIM20-205ENST00000614775 KDM6AO15550 1401 aaPredicted RBP25.38■■□□□ 1.65
SMIM20-205ENST00000614775 NEUROD1Q13562 356 aa25.38■■□□□ 1.65
SMIM20-205ENST00000614775 RC3H1Q5TC82 1133 aaKnown RBP25.38■■□□□ 1.65
SMIM20-205ENST00000614775 CNTNAP4Q9C0A0 1308 aa25.37■■□□□ 1.65
SMIM20-205ENST00000614775 GLTPD2A6NH11 291 aa25.36■■□□□ 1.65
SMIM20-205ENST00000614775 RPS6KA4O75676 772 aa25.36■■□□□ 1.65
SMIM20-205ENST00000614775 CHRNA5P30532 468 aa25.36■■□□□ 1.65
SMIM20-205ENST00000614775 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.35■■□□□ 1.65
SMIM20-205ENST00000614775 PHKG2P15735 406 aa25.34■■□□□ 1.65
SMIM20-205ENST00000614775 RASSF7Q02833 373 aa25.34■■□□□ 1.65
SMIM20-205ENST00000614775 TESK2Q96S53 571 aa25.34■■□□□ 1.65
SMIM20-205ENST00000614775 PCGF6Q9BYE7 350 aa25.34■■□□□ 1.65
SMIM20-205ENST00000614775 MYH14Q7Z406 1995 aaKnown RBP25.33■■□□□ 1.65
SMIM20-205ENST00000614775 DDR1Q08345 913 aa25.33■■□□□ 1.65
SMIM20-205ENST00000614775 IFNL2Q8IZJ0 200 aa25.33■■□□□ 1.65
SMIM20-205ENST00000614775 RBM42Q9BTD8 480 aaKnown RBP25.32■■□□□ 1.64
SMIM20-205ENST00000614775 TONSLQ96HA7 1378 aa25.31■■□□□ 1.64
SMIM20-205ENST00000614775 KIF20BQ96Q89 1820 aa25.3■■□□□ 1.64
SMIM20-205ENST00000614775 TIAM2Q8IVF5 1701 aa25.3■■□□□ 1.64
SMIM20-205ENST00000614775 FOXN1O15353 648 aa25.3■■□□□ 1.64
SMIM20-205ENST00000614775 LMNB1P20700 586 aa25.3■■□□□ 1.64
SMIM20-205ENST00000614775 FKBP8Q14318 412 aa25.3■■□□□ 1.64
SMIM20-205ENST00000614775 EMILIN1Q9Y6C2 1016 aa25.3■■□□□ 1.64
SMIM20-205ENST00000614775 PRDM10Q9NQV6 1147 aa25.29■■□□□ 1.64
SMIM20-205ENST00000614775 SRP68Q9UHB9 627 aaKnown RBP25.29■■□□□ 1.64
SMIM20-205ENST00000614775 MKRN1Q9UHC7 482 aaKnown RBP25.28■■□□□ 1.64
SMIM20-205ENST00000614775 POTECB2RU33 542 aa25.27■■□□□ 1.64
SMIM20-205ENST00000614775 CREBZFQ9NS37 354 aa25.27■■□□□ 1.64
SMIM20-205ENST00000614775 USP42Q9H9J4 1324 aaKnown RBP25.27■■□□□ 1.64
SMIM20-205ENST00000614775 EYA1Q99502 592 aa25.25■■□□□ 1.63
SMIM20-205ENST00000614775 CCDC88AQ3V6T2 1871 aa25.24■■□□□ 1.63
SMIM20-205ENST00000614775 ANKRD26Q9UPS8 1709 aa25.24■■□□□ 1.63
SMIM20-205ENST00000614775 POLRMTO00411 1230 aaKnown RBP25.24■■□□□ 1.63
SMIM20-205ENST00000614775 ST20-MTHFSA0A0A6YYL1 179 aa25.23■■□□□ 1.63
SMIM20-205ENST00000614775 PCDH10Q9P2E7 1040 aa25.23■■□□□ 1.63
SMIM20-205ENST00000614775 ERVV-2B6SEH9 535 aa25.22■■□□□ 1.63
SMIM20-205ENST00000614775 TM4SF1P30408 202 aa25.22■■□□□ 1.63
SMIM20-205ENST00000614775 PPM1GO15355 546 aaPredicted RBP25.21■■□□□ 1.63
SMIM20-205ENST00000614775 CRKLP46109 303 aaKnown RBP25.21■■□□□ 1.63
SMIM20-205ENST00000614775 DLEC1Q9Y238 1755 aa25.21■■□□□ 1.63
SMIM20-205ENST00000614775 FAM161AQ3B820 660 aa25.2■■□□□ 1.62
SMIM20-205ENST00000614775 ADAMTS7Q9UKP4 1686 aa25.2■■□□□ 1.62
SMIM20-205ENST00000614775 CNTNAP1P78357 1384 aa25.19■■□□□ 1.62
SMIM20-205ENST00000614775 WASHC2AQ641Q2 1341 aa25.19■■□□□ 1.62
SMIM20-205ENST00000614775 SLC24A1O60721 1099 aa25.19■■□□□ 1.62
SMIM20-205ENST00000614775 CTCFP49711 727 aaPredicted RBP25.19■■□□□ 1.62
SMIM20-205ENST00000614775 CHADLQ6NUI6 762 aa25.18■■□□□ 1.62
SMIM20-205ENST00000614775 NFKBIEO00221 500 aa25.17■■□□□ 1.62
SMIM20-205ENST00000614775 AFDNP55196 1824 aaKnown RBP25.16■■□□□ 1.62
SMIM20-205ENST00000614775 DPY19L2Q6NUT2 758 aa25.16■■□□□ 1.62
SMIM20-205ENST00000614775 TJP1Q07157 1748 aa25.15■■□□□ 1.62
SMIM20-205ENST00000614775 PTCD1O75127 700 aaKnown RBP25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms