RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 DUSP27Q5VZP5 1158 aa8.14□□□□□ -1.11
CBWD3-210ENST00000614398 HEG1Q9ULI3 1381 aa8.14□□□□□ -1.11
CBWD3-210ENST00000614398 DDB1Q16531 1140 aa8.13□□□□□ -1.11
CBWD3-210ENST00000614398 ZNF428Q96B54 188 aa8.13□□□□□ -1.11
CBWD3-210ENST00000614398 QTRT2Q9H974 415 aaKnown RBP8.13□□□□□ -1.11
CBWD3-210ENST00000614398 KCPQ6ZWJ8 1503 aa8.13□□□□□ -1.11
CBWD3-210ENST00000614398 CACNA1FO60840 1977 aa8.13□□□□□ -1.11
CBWD3-210ENST00000614398 TAF7Q15545 349 aaPredicted RBP8.13□□□□□ -1.11
CBWD3-210ENST00000614398 SLC52A2Q9HAB3 445 aa8.13□□□□□ -1.11
CBWD3-210ENST00000614398 FANCIQ9NVI1 1328 aa8.12□□□□□ -1.11
CBWD3-210ENST00000614398 RREB1Q92766 1687 aa8.12□□□□□ -1.11
CBWD3-210ENST00000614398 HOXB7P09629 217 aa8.12□□□□□ -1.11
CBWD3-210ENST00000614398 UBE2Q2Q8WVN8 375 aa8.12□□□□□ -1.11
CBWD3-210ENST00000614398 YTHDC1Q96MU7 727 aaKnown RBP8.12□□□□□ -1.11
CBWD3-210ENST00000614398 RGS17Q9UGC6 210 aaPredicted RBP8.12□□□□□ -1.11
CBWD3-210ENST00000614398 LY75O60449 1722 aa8.11□□□□□ -1.11
CBWD3-210ENST00000614398 FAM98CQ17RN3 349 aaKnown RBP8.11□□□□□ -1.11
CBWD3-210ENST00000614398 MCM10Q7L590 875 aa8.11□□□□□ -1.11
CBWD3-210ENST00000614398 SPINK5Q9NQ38 1064 aaPredicted RBP8.11□□□□□ -1.11
CBWD3-210ENST00000614398 RGS12O14924 1447 aa8.11□□□□□ -1.11
CBWD3-210ENST00000614398 C5P01031 1676 aa8.11□□□□□ -1.11
CBWD3-210ENST00000614398 NEUROD2Q15784 382 aa8.11□□□□□ -1.11
CBWD3-210ENST00000614398 MARCH10Q8NA82 808 aaPredicted RBP8.11□□□□□ -1.11
CBWD3-210ENST00000614398 LGR6Q9HBX8 967 aa8.11□□□□□ -1.11
CBWD3-210ENST00000614398 CCDC9Q9Y3X0 531 aaKnown RBP8.11□□□□□ -1.11
CBWD3-210ENST00000614398 BTAF1O14981 1849 aa8.1□□□□□ -1.11
CBWD3-210ENST00000614398 TJP1Q07157 1748 aa8.1□□□□□ -1.11
CBWD3-210ENST00000614398 N4BP2Q86UW6 1770 aaPredicted RBP8.1□□□□□ -1.11
CBWD3-210ENST00000614398 BRPF1P55201 1214 aaPredicted RBP8.1□□□□□ -1.11
CBWD3-210ENST00000614398 TEFQ10587 303 aa8.1□□□□□ -1.11
CBWD3-210ENST00000614398 MPRIPQ6WCQ1 1025 aa8.1□□□□□ -1.11
CBWD3-210ENST00000614398 CDCA7LQ96GN5 454 aa8.1□□□□□ -1.11
CBWD3-210ENST00000614398 CHMP4AQ9BY43 222 aa8.1□□□□□ -1.11
CBWD3-210ENST00000614398 MBIPQ9NS73 344 aa8.1□□□□□ -1.11
CBWD3-210ENST00000614398 ILDR1Q86SU0 546 aaPredicted RBP8.1□□□□□ -1.11
CBWD3-210ENST00000614398 SEPT12Q8IYM1 358 aa8.1□□□□□ -1.11
CBWD3-210ENST00000614398 USP35Q9P2H5 1018 aa8.1□□□□□ -1.11
CBWD3-210ENST00000614398 TNS1Q9HBL0 1735 aaKnown RBP8.1□□□□□ -1.11
CBWD3-210ENST00000614398 RNF123Q5XPI4 1314 aa8.1□□□□□ -1.11
CBWD3-210ENST00000614398 COL5A3P25940 1745 aaPredicted RBP8.09□□□□□ -1.11
CBWD3-210ENST00000614398 DCTN1Q14203 1278 aa8.09□□□□□ -1.11
CBWD3-210ENST00000614398 THUMPD2Q9BTF0 503 aaKnown RBP8.09□□□□□ -1.11
CBWD3-210ENST00000614398 RXRBP28702 533 aa8.09□□□□□ -1.12
CBWD3-210ENST00000614398 EIF5BO60841 1220 aaKnown RBP8.08□□□□□ -1.12
CBWD3-210ENST00000614398 CABP4P57796 275 aa8.08□□□□□ -1.12
CBWD3-210ENST00000614398 EIF4A1P60842 406 aaKnown RBP8.08□□□□□ -1.12
CBWD3-210ENST00000614398 ALDH1L2Q3SY69 923 aa8.08□□□□□ -1.12
CBWD3-210ENST00000614398 VSIG10Q8N0Z9 540 aa8.08□□□□□ -1.12
CBWD3-210ENST00000614398 DDX54Q8TDD1 881 aaKnown RBP8.08□□□□□ -1.12
CBWD3-210ENST00000614398 TSPYL4Q9UJ04 414 aa8.08□□□□□ -1.12
CBWD3-210ENST00000614398 SALL2Q9Y467 1007 aaPredicted RBP8.08□□□□□ -1.12
CBWD3-210ENST00000614398 ERBB4Q15303 1308 aa8.07□□□□□ -1.12
CBWD3-210ENST00000614398 BTBD11A6QL63 1104 aa8.07□□□□□ -1.12
CBWD3-210ENST00000614398 ZNF790Q6PG37 636 aa8.07□□□□□ -1.12
CBWD3-210ENST00000614398 POTEAQ6S8J7 498 aa8.07□□□□□ -1.12
CBWD3-210ENST00000614398 FAM196AQ6ZSG2 479 aa8.07□□□□□ -1.12
CBWD3-210ENST00000614398 TSHZ2Q9NRE2 1034 aa8.07□□□□□ -1.12
CBWD3-210ENST00000614398 TMOD3Q9NYL9 352 aa8.07□□□□□ -1.12
CBWD3-210ENST00000614398 EXOSC9Q06265 439 aaKnown RBP8.06□□□□□ -1.12
CBWD3-210ENST00000614398 KRT27Q7Z3Y8 459 aa8.06□□□□□ -1.12
CBWD3-210ENST00000614398 SMARCC1Q92922 1105 aaPredicted RBP8.06□□□□□ -1.12
CBWD3-210ENST00000614398 TSR2Q969E8 191 aaKnown RBP8.06□□□□□ -1.12
CBWD3-210ENST00000614398 IBTKQ9P2D0 1353 aaPredicted RBP8.06□□□□□ -1.12
CBWD3-210ENST00000614398 TAF1LQ8IZX4 1826 aa8.06□□□□□ -1.12
CBWD3-210ENST00000614398 VAMP4O75379 141 aa8.06□□□□□ -1.12
CBWD3-210ENST00000614398 HMGB2P26583 209 aaKnown RBP8.06□□□□□ -1.12
CBWD3-210ENST00000614398 NFATC2IPQ8NCF5 419 aa8.06□□□□□ -1.12
CBWD3-210ENST00000614398 PIGBQ92521 554 aa8.06□□□□□ -1.12
CBWD3-210ENST00000614398 ERICH6BQ5W0A0 696 aa8.05□□□□□ -1.12
CBWD3-210ENST00000614398 FMNL2Q96PY5 1086 aa8.05□□□□□ -1.12
CBWD3-210ENST00000614398 RCAN3Q9UKA8 241 aa8.05□□□□□ -1.12
CBWD3-210ENST00000614398 TEX13AQ9BXU3 409 aaPredicted RBP8.05□□□□□ -1.12
CBWD3-210ENST00000614398 BCL11BQ9C0K0 894 aaPredicted RBP8.05□□□□□ -1.12
CBWD3-210ENST00000614398 GIGYF1O75420 1035 aaPredicted RBP8.04□□□□□ -1.12
CBWD3-210ENST00000614398 RARSP54136 660 aaKnown RBP8.04□□□□□ -1.12
CBWD3-210ENST00000614398 TWISTNBQ3B726 338 aaPredicted RBP8.04□□□□□ -1.12
CBWD3-210ENST00000614398 C8orf58Q8NAV2 365 aa8.04□□□□□ -1.12
CBWD3-210ENST00000614398 ATG3Q9NT62 314 aa8.04□□□□□ -1.12
CBWD3-210ENST00000614398 QSER1Q2KHR3 1735 aa8.04□□□□□ -1.12
CBWD3-210ENST00000614398 PXDNLA1KZ92 1463 aa8.04□□□□□ -1.12
CBWD3-210ENST00000614398 TTC5Q8N0Z6 440 aa8.04□□□□□ -1.12
CBWD3-210ENST00000614398 SNRPA1P09661 255 aaKnown RBP8.03□□□□□ -1.12
CBWD3-210ENST00000614398 PRIM1P49642 420 aaKnown RBP8.03□□□□□ -1.12
CBWD3-210ENST00000614398 ARHGAP45Q92619 1136 aa8.03□□□□□ -1.12
CBWD3-210ENST00000614398 NUP188Q5SRE5 1749 aa8.03□□□□□ -1.12
CBWD3-210ENST00000614398 KIF16BQ96L93 1317 aa8.03□□□□□ -1.12
CBWD3-210ENST00000614398 SENP3-EIF4A1A0A087X0R7 540 aa8.03□□□□□ -1.12
CBWD3-210ENST00000614398 ZNF496Q96IT1 587 aaPredicted RBP8.03□□□□□ -1.12
CBWD3-210ENST00000614398 LAS1LQ9Y4W2 734 aaKnown RBP8.03□□□□□ -1.12
CBWD3-210ENST00000614398 KCNQ3O43525 872 aa8.02□□□□□ -1.13
CBWD3-210ENST00000614398 CCDC30Q5VVM6 783 aa8.02□□□□□ -1.13
CBWD3-210ENST00000614398 TSPYL6Q8N831 410 aa8.02□□□□□ -1.13
CBWD3-210ENST00000614398 PALLDQ8WX93 1383 aa8.02□□□□□ -1.13
CBWD3-210ENST00000614398 BCORQ6W2J9 1755 aa8.02□□□□□ -1.13
CBWD3-210ENST00000614398 RGL2O15211 777 aa8.02□□□□□ -1.13
CBWD3-210ENST00000614398 MRPL50Q8N5N7 158 aaKnown RBP8.02□□□□□ -1.13
CBWD3-210ENST00000614398 MIS18AQ9NYP9 233 aa8.02□□□□□ -1.13
CBWD3-210ENST00000614398 PTPRCP08575 1304 aa8.01□□□□□ -1.13
CBWD3-210ENST00000614398 MAPK8IP2Q13387 824 aaPredicted RBP8.01□□□□□ -1.13
CBWD3-210ENST00000614398 C4BP0C0L5 1744 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms