RNA–Protein interactions for RNA: ENST00000613928.1

CCL3-205, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 5

Gene CCL3, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-205ENST00000613928 NEURL4Q96JN8 1562 aa11.73□□□□□ -0.53
CCL3-205ENST00000613928 USP47Q96K76 1375 aa11.73□□□□□ -0.53
CCL3-205ENST00000613928 CEP170BQ9Y4F5 1589 aaPredicted RBP11.73□□□□□ -0.53
CCL3-205ENST00000613928 ZMYM3Q14202 1370 aa11.72□□□□□ -0.53
CCL3-205ENST00000613928 WASHC2CQ9Y4E1 1318 aa11.72□□□□□ -0.53
CCL3-205ENST00000613928 PRM3Q9NNZ6 103 aa11.72□□□□□ -0.53
CCL3-205ENST00000613928 CCDC7Q96M83 1385 aa11.71□□□□□ -0.53
CCL3-205ENST00000613928 A6NJR5 290 aa11.71□□□□□ -0.53
CCL3-205ENST00000613928 CTDSPL2Q05D32 466 aa11.71□□□□□ -0.53
CCL3-205ENST00000613928 CARD11Q9BXL7 1154 aa11.71□□□□□ -0.53
CCL3-205ENST00000613928 GPRASP1Q5JY77 1395 aa11.7□□□□□ -0.54
CCL3-205ENST00000613928 NBPF1Q3BBV0 1214 aa11.7□□□□□ -0.54
CCL3-205ENST00000613928 MTRQ99707 1265 aa11.7□□□□□ -0.54
CCL3-205ENST00000613928 ZC3H13Q5T200 1668 aaKnown RBP11.7□□□□□ -0.54
CCL3-205ENST00000613928 NOS1P29475 1434 aa11.69□□□□□ -0.54
CCL3-205ENST00000613928 ARHGAP31Q2M1Z3 1444 aa11.69□□□□□ -0.54
CCL3-205ENST00000613928 ROCK2O75116 1388 aaKnown RBP11.69□□□□□ -0.54
CCL3-205ENST00000613928 RNF166Q96A37 237 aaPredicted RBP11.69□□□□□ -0.54
CCL3-205ENST00000613928 CLUAP1Q96AJ1 413 aa11.69□□□□□ -0.54
CCL3-205ENST00000613928 SPSB2Q99619 263 aa11.69□□□□□ -0.54
CCL3-205ENST00000613928 POLR1AO95602 1720 aaPredicted RBP11.69□□□□□ -0.54
CCL3-205ENST00000613928 LAMC1P11047 1609 aa11.68□□□□□ -0.54
CCL3-205ENST00000613928 KIF7Q2M1P5 1343 aa11.68□□□□□ -0.54
CCL3-205ENST00000613928 KIF1BO60333 1816 aa11.68□□□□□ -0.54
CCL3-205ENST00000613928 ZPR1O75312 459 aa11.68□□□□□ -0.54
CCL3-205ENST00000613928 HSPA1LP34931 641 aa11.68□□□□□ -0.54
CCL3-205ENST00000613928 PIP4K2BP78356 416 aa11.68□□□□□ -0.54
CCL3-205ENST00000613928 MSS51Q4VC12 460 aa11.68□□□□□ -0.54
CCL3-205ENST00000613928 IL21Q9HBE4 155 aa11.68□□□□□ -0.54
CCL3-205ENST00000613928 ADGRB3O60242 1522 aa11.67□□□□□ -0.54
CCL3-205ENST00000613928 SPNS2Q8IVW8 549 aa11.67□□□□□ -0.54
CCL3-205ENST00000613928 HCSTQ9UBK5 93 aa11.67□□□□□ -0.54
CCL3-205ENST00000613928 COG6Q9Y2V7 657 aa11.67□□□□□ -0.54
CCL3-205ENST00000613928 SYNMO15061 1565 aa11.67□□□□□ -0.54
CCL3-205ENST00000613928 CFAP65Q6ZU64 1925 aaKnown RBP11.66□□□□□ -0.54
CCL3-205ENST00000613928 JUNDP17535 347 aa11.66□□□□□ -0.54
CCL3-205ENST00000613928 TJAP1Q5JTD0 557 aa11.66□□□□□ -0.54
CCL3-205ENST00000613928 IFT172Q9UG01 1749 aa11.66□□□□□ -0.54
CCL3-205ENST00000613928 MYOM2P54296 1465 aa11.65□□□□□ -0.54
CCL3-205ENST00000613928 PIK3C2BO00750 1634 aa11.65□□□□□ -0.54
CCL3-205ENST00000613928 ST20-MTHFSA0A0A6YYL1 179 aa11.65□□□□□ -0.54
CCL3-205ENST00000613928 ADH1BP00325 375 aa11.65□□□□□ -0.54
CCL3-205ENST00000613928 LYPD8Q6UX82 237 aa11.65□□□□□ -0.54
CCL3-205ENST00000613928 LRRN4Q8WUT4 740 aa11.65□□□□□ -0.54
CCL3-205ENST00000613928 POM121Q96HA1 1249 aa11.65□□□□□ -0.54
CCL3-205ENST00000613928 PROSER2Q86WR7 435 aaPredicted RBP11.64□□□□□ -0.55
CCL3-205ENST00000613928 HMX1Q9NP08 348 aaPredicted RBP11.64□□□□□ -0.55
CCL3-205ENST00000613928 NDUFB9Q9Y6M9 179 aa11.64□□□□□ -0.55
CCL3-205ENST00000613928 A2ML1A8K2U0 1454 aa11.63□□□□□ -0.55
CCL3-205ENST00000613928 ANP32CO43423 234 aa11.63□□□□□ -0.55
CCL3-205ENST00000613928 TLL1O43897 1013 aa11.63□□□□□ -0.55
CCL3-205ENST00000613928 PTPRNQ16849 979 aa11.63□□□□□ -0.55
CCL3-205ENST00000613928 WWC1Q8IX03 1113 aa11.63□□□□□ -0.55
CCL3-205ENST00000613928 GJD4Q96KN9 370 aaPredicted RBP11.63□□□□□ -0.55
CCL3-205ENST00000613928 NRXN1Q9ULB1 1477 aa11.63□□□□□ -0.55
CCL3-205ENST00000613928 ADGRF5Q8IZF2 1346 aa11.62□□□□□ -0.55
CCL3-205ENST00000613928 CPS1P31327 1500 aa11.62□□□□□ -0.55
CCL3-205ENST00000613928 PER1O15534 1290 aaPredicted RBP11.62□□□□□ -0.55
CCL3-205ENST00000613928 FAM160A2Q8N612 972 aaPredicted RBP11.62□□□□□ -0.55
CCL3-205ENST00000613928 YTHDC1Q96MU7 727 aaKnown RBP11.62□□□□□ -0.55
CCL3-205ENST00000613928 GDPD2Q9HCC8 539 aa11.62□□□□□ -0.55
CCL3-205ENST00000613928 KIAA1210Q9ULL0 1709 aa11.62□□□□□ -0.55
CCL3-205ENST00000613928 TOM1O60784 492 aa11.61□□□□□ -0.55
CCL3-205ENST00000613928 DXOO77932 396 aaKnown RBP11.61□□□□□ -0.55
CCL3-205ENST00000613928 PPLO60437 1756 aa11.61□□□□□ -0.55
CCL3-205ENST00000613928 IQGAP1P46940 1657 aa11.6□□□□□ -0.55
CCL3-205ENST00000613928 ERVK-7P63135 1459 aa11.6□□□□□ -0.55
CCL3-205ENST00000613928 CCER2I3L3R5 266 aa11.6□□□□□ -0.55
CCL3-205ENST00000613928 TRAK2O60296 914 aa11.6□□□□□ -0.55
CCL3-205ENST00000613928 MMP16P51512 607 aa11.6□□□□□ -0.55
CCL3-205ENST00000613928 IDI1Q13907 227 aa11.6□□□□□ -0.55
CCL3-205ENST00000613928 PNMA1Q8ND90 353 aa11.6□□□□□ -0.55
CCL3-205ENST00000613928 ZNF516Q92618 1163 aa11.6□□□□□ -0.55
CCL3-205ENST00000613928 TESK2Q96S53 571 aa11.6□□□□□ -0.55
CCL3-205ENST00000613928 TRIM34Q9BYJ4 488 aa11.6□□□□□ -0.55
CCL3-205ENST00000613928 TBC1D2BQ9UPU7 963 aa11.6□□□□□ -0.55
CCL3-205ENST00000613928 ALKQ9UM73 1620 aa11.6□□□□□ -0.55
CCL3-205ENST00000613928 RPGRIP1LQ68CZ1 1315 aa11.6□□□□□ -0.55
CCL3-205ENST00000613928 CFAP70Q5T0N1 1121 aa11.59□□□□□ -0.55
CCL3-205ENST00000613928 SLC52A1Q9NWF4 448 aa11.59□□□□□ -0.55
CCL3-205ENST00000613928 ABL2P42684 1182 aa11.58□□□□□ -0.56
CCL3-205ENST00000613928 FNBP4Q8N3X1 1017 aaPredicted RBP11.58□□□□□ -0.56
CCL3-205ENST00000613928 SLC6A16Q9GZN6 736 aa11.58□□□□□ -0.56
CCL3-205ENST00000613928 PRDM9Q9NQV7 894 aa11.58□□□□□ -0.56
CCL3-205ENST00000613928 SCAF11Q99590 1463 aaKnown RBP11.57□□□□□ -0.56
CCL3-205ENST00000613928 NEXMIFQ5QGS0 1516 aa11.57□□□□□ -0.56
CCL3-205ENST00000613928 CCNYL3P0C7X3 344 aa11.57□□□□□ -0.56
CCL3-205ENST00000613928 NR6A1Q15406 480 aa11.57□□□□□ -0.56
CCL3-205ENST00000613928 POLR3GLQ9BT43 218 aa11.57□□□□□ -0.56
CCL3-205ENST00000613928 TMEM131LA2VDJ0 1609 aa11.57□□□□□ -0.56
CCL3-205ENST00000613928 TNRQ92752 1358 aa11.56□□□□□ -0.56
CCL3-205ENST00000613928 PIK3C2GO75747 1445 aa11.56□□□□□ -0.56
CCL3-205ENST00000613928 CENPBP07199 599 aaPredicted RBP11.56□□□□□ -0.56
CCL3-205ENST00000613928 NUDT12Q9BQG2 462 aa11.56□□□□□ -0.56
CCL3-205ENST00000613928 STRCP1A6NGW2 1772 aa11.56□□□□□ -0.56
CCL3-205ENST00000613928 ITGBL1O95965 494 aaPredicted RBP11.55□□□□□ -0.56
CCL3-205ENST00000613928 F12P00748 615 aaPredicted RBP11.55□□□□□ -0.56
CCL3-205ENST00000613928 KCNC4Q03721 635 aa11.55□□□□□ -0.56
CCL3-205ENST00000613928 EPS8L1Q8TE68 723 aa11.55□□□□□ -0.56
CCL3-205ENST00000613928 C14orf93Q9H972 538 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms