RNA–Protein interactions for RNA: ENST00000613922.1

CCL3-204, Transcript of C-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL3, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-204ENST00000613922 LINC00116Q8NCU8 138 aa23.26■■□□□ 1.31
CCL3-204ENST00000613922 AK7Q96M32 723 aa23.26■■□□□ 1.31
CCL3-204ENST00000613922 AMIGO3Q86WK7 504 aa23.25■■□□□ 1.31
CCL3-204ENST00000613922 CHD4Q14839 1912 aa23.24■■□□□ 1.31
CCL3-204ENST00000613922 ITPK1Q13572 414 aa23.24■■□□□ 1.31
CCL3-204ENST00000613922 C1orf141Q5JVX7 400 aa23.24■■□□□ 1.31
CCL3-204ENST00000613922 COL5A3P25940 1745 aaPredicted RBP23.24■■□□□ 1.31
CCL3-204ENST00000613922 UTRNP46939 3433 aa23.24■■□□□ 1.31
CCL3-204ENST00000613922 COL3A1P02461 1466 aaPredicted RBP23.24■■□□□ 1.31
CCL3-204ENST00000613922 ATP6V1AP38606 617 aa23.23■■□□□ 1.31
CCL3-204ENST00000613922 DIAPH1O60610 1272 aaKnown RBP23.22■■□□□ 1.31
CCL3-204ENST00000613922 YY1P25490 414 aa23.22■■□□□ 1.31
CCL3-204ENST00000613922 SSFA2P28290 1259 aa23.21■■□□□ 1.31
CCL3-204ENST00000613922 CABP4P57796 275 aa23.21■■□□□ 1.31
CCL3-204ENST00000613922 SLC4A9Q96Q91 983 aa23.21■■□□□ 1.31
CCL3-204ENST00000613922 MSL1Q68DK7 614 aa23.2■■□□□ 1.3
CCL3-204ENST00000613922 MYH14Q7Z406 1995 aaKnown RBP23.2■■□□□ 1.3
CCL3-204ENST00000613922 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.19■■□□□ 1.3
CCL3-204ENST00000613922 HMOX1P09601 288 aa23.19■■□□□ 1.3
CCL3-204ENST00000613922 AKAP4Q5JQC9 854 aa23.19■■□□□ 1.3
CCL3-204ENST00000613922 ADAMTS7Q9UKP4 1686 aa23.19■■□□□ 1.3
CCL3-204ENST00000613922 SMIM5Q71RC9 77 aa23.18■■□□□ 1.3
CCL3-204ENST00000613922 CICQ96RK0 1608 aaPredicted RBP23.18■■□□□ 1.3
CCL3-204ENST00000613922 PHF14O94880 888 aa23.17■■□□□ 1.3
CCL3-204ENST00000613922 KLHL34Q8N239 644 aa23.17■■□□□ 1.3
CCL3-204ENST00000613922 GNPATO15228 680 aa23.16■■□□□ 1.3
CCL3-204ENST00000613922 NFATC2IPQ8NCF5 419 aa23.16■■□□□ 1.3
CCL3-204ENST00000613922 RBM42Q9BTD8 480 aaKnown RBP23.16■■□□□ 1.3
CCL3-204ENST00000613922 MRC1P22897 1456 aa23.16■■□□□ 1.3
CCL3-204ENST00000613922 NLGN2Q8NFZ4 835 aa23.15■■□□□ 1.3
CCL3-204ENST00000613922 CNTNAP4Q9C0A0 1308 aa23.14■■□□□ 1.3
CCL3-204ENST00000613922 TJP1Q07157 1748 aa23.14■■□□□ 1.3
CCL3-204ENST00000613922 CNGB1Q14028 1251 aaPredicted RBP23.14■■□□□ 1.29
CCL3-204ENST00000613922 RC3H1Q5TC82 1133 aaKnown RBP23.14■■□□□ 1.29
CCL3-204ENST00000613922 MTHFSDQ2M296 383 aaKnown RBP23.13■■□□□ 1.29
CCL3-204ENST00000613922 GOLGB1Q14789 3259 aaKnown RBP23.13■■□□□ 1.29
CCL3-204ENST00000613922 SLC52A2Q9HAB3 445 aa23.12■■□□□ 1.29
CCL3-204ENST00000613922 LGR6Q9HBX8 967 aa23.12■■□□□ 1.29
CCL3-204ENST00000613922 RNMTO43148 476 aaKnown RBP23.11■■□□□ 1.29
CCL3-204ENST00000613922 RTCBQ9Y3I0 505 aaKnown RBP23.11■■□□□ 1.29
CCL3-204ENST00000613922 CD2APQ9Y5K6 639 aa23.11■■□□□ 1.29
CCL3-204ENST00000613922 C4AP0C0L4 1744 aa23.11■■□□□ 1.29
CCL3-204ENST00000613922 GPR162Q16538 588 aa23.1■■□□□ 1.29
CCL3-204ENST00000613922 PTCD1O75127 700 aaKnown RBP23.09■■□□□ 1.29
CCL3-204ENST00000613922 RPS6KA4O75676 772 aa23.09■■□□□ 1.29
CCL3-204ENST00000613922 ADRA2BP18089 450 aa23.09■■□□□ 1.29
CCL3-204ENST00000613922 U2SURPO15042 1029 aaKnown RBP23.08■■□□□ 1.29
CCL3-204ENST00000613922 TRAPPC3LQ5T215 181 aa23.08■■□□□ 1.29
CCL3-204ENST00000613922 UBR2Q8IWV8 1755 aa23.06■■□□□ 1.28
CCL3-204ENST00000613922 KIF13BQ9NQT8 1826 aa23.06■■□□□ 1.28
CCL3-204ENST00000613922 ARHGEF1Q92888 912 aaKnown RBP23.06■■□□□ 1.28
CCL3-204ENST00000613922 CFAP53Q96M91 514 aa23.06■■□□□ 1.28
CCL3-204ENST00000613922 SIPA1L3O60292 1781 aaPredicted RBP23.06■■□□□ 1.28
CCL3-204ENST00000613922 KCPQ6ZWJ8 1503 aa23.05■■□□□ 1.28
CCL3-204ENST00000613922 PPP2R1AP30153 589 aa23.05■■□□□ 1.28
CCL3-204ENST00000613922 CRKLP46109 303 aaKnown RBP23.05■■□□□ 1.28
CCL3-204ENST00000613922 GAS2L2Q8NHY3 880 aa23.04■■□□□ 1.28
CCL3-204ENST00000613922 YBX3P16989 372 aaKnown RBP eCLIP23.03■■□□□ 1.28
CCL3-204ENST00000613922 PELP1Q8IZL8 1130 aaKnown RBP23.03■■□□□ 1.28
CCL3-204ENST00000613922 SLC39A6Q13433 755 aa23.02■■□□□ 1.28
CCL3-204ENST00000613922 NLGN1Q8N2Q7 840 aa23.02■■□□□ 1.28
CCL3-204ENST00000613922 MMP10P09238 476 aa23.01■■□□□ 1.27
CCL3-204ENST00000613922 RFC4P35249 363 aa23.01■■□□□ 1.27
CCL3-204ENST00000613922 RSPH6AQ9H0K4 717 aa23.01■■□□□ 1.27
CCL3-204ENST00000613922 GNAT3A8MTJ3 354 aa23■■□□□ 1.27
CCL3-204ENST00000613922 GYS1P13807 737 aa23■■□□□ 1.27
CCL3-204ENST00000613922 INTS5Q6P9B9 1019 aaKnown RBP23■■□□□ 1.27
CCL3-204ENST00000613922 DNAJC10Q8IXB1 793 aa23■■□□□ 1.27
CCL3-204ENST00000613922 NUDCQ9Y266 331 aa23■■□□□ 1.27
CCL3-204ENST00000613922 KIAA1551Q9HCM1 1747 aa22.99■■□□□ 1.27
CCL3-204ENST00000613922 GRIN3BO60391 1043 aa22.99■■□□□ 1.27
CCL3-204ENST00000613922 ZNF784Q8NCA9 323 aaPredicted RBP22.99■■□□□ 1.27
CCL3-204ENST00000613922 IL17REQ8NFR9 667 aa22.99■■□□□ 1.27
CCL3-204ENST00000613922 PRKAR2BP31323 418 aa22.98■■□□□ 1.27
CCL3-204ENST00000613922 VSIG10Q8N0Z9 540 aa22.98■■□□□ 1.27
CCL3-204ENST00000613922 PHACTR3Q96KR7 559 aa22.98■■□□□ 1.27
CCL3-204ENST00000613922 CYP19A1P11511 503 aaPredicted RBP22.97■■□□□ 1.27
CCL3-204ENST00000613922 CCDC87Q9NVE4 849 aa22.97■■□□□ 1.27
CCL3-204ENST00000613922 CEMIPQ8WUJ3 1361 aa22.97■■□□□ 1.27
CCL3-204ENST00000613922 USP42Q9H9J4 1324 aaKnown RBP22.96■■□□□ 1.27
CCL3-204ENST00000613922 SOS1Q07889 1333 aaPredicted RBP22.95■■□□□ 1.26
CCL3-204ENST00000613922 C10orf71Q711Q0 1435 aa22.95■■□□□ 1.26
CCL3-204ENST00000613922 N4BP2Q86UW6 1770 aaPredicted RBP22.95■■□□□ 1.26
CCL3-204ENST00000613922 FCHSD2O94868 740 aa22.94■■□□□ 1.26
CCL3-204ENST00000613922 U2AF1L5P0DN76 240 aaPredicted RBP22.94■■□□□ 1.26
CCL3-204ENST00000613922 U2AF1Q01081 240 aaKnown RBP eCLIP22.94■■□□□ 1.26
CCL3-204ENST00000613922 TEFQ10587 303 aa22.94■■□□□ 1.26
CCL3-204ENST00000613922 SRP68Q9UHB9 627 aaKnown RBP22.94■■□□□ 1.26
CCL3-204ENST00000613922 PXDNLA1KZ92 1463 aa22.92■■□□□ 1.26
CCL3-204ENST00000613922 BRCA1P38398 1863 aaKnown RBP22.92■■□□□ 1.26
CCL3-204ENST00000613922 TTC5Q8N0Z6 440 aa22.92■■□□□ 1.26
CCL3-204ENST00000613922 FKBP8Q14318 412 aa22.91■■□□□ 1.26
CCL3-204ENST00000613922 ZNF790Q6PG37 636 aa22.91■■□□□ 1.26
CCL3-204ENST00000613922 ZBTB1Q9Y2K1 713 aa22.91■■□□□ 1.26
CCL3-204ENST00000613922 PARP3Q9Y6F1 533 aa22.91■■□□□ 1.26
CCL3-204ENST00000613922 TGFB2P61812 414 aa22.9■■□□□ 1.26
CCL3-204ENST00000613922 DLG5Q8TDM6 1919 aa22.9■■□□□ 1.26
CCL3-204ENST00000613922 HEG1Q9ULI3 1381 aa22.89■■□□□ 1.26
CCL3-204ENST00000613922 ZNF496Q96IT1 587 aaPredicted RBP22.89■■□□□ 1.25
CCL3-204ENST00000613922 COL15A1P39059 1388 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms