RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 HMGB2P26583 209 aaKnown RBP32.59■■■□□ 2.81
MMP28-203ENST00000612672 IFFO2Q5TF58 517 aa32.59■■■□□ 2.81
MMP28-203ENST00000612672 ATG3Q9NT62 314 aa32.59■■■□□ 2.81
MMP28-203ENST00000612672 SLC4A9Q96Q91 983 aa32.58■■■□□ 2.81
MMP28-203ENST00000612672 ZNF831Q5JPB2 1677 aa32.57■■■□□ 2.8
MMP28-203ENST00000612672 ATP6V1AP38606 617 aa32.57■■■□□ 2.8
MMP28-203ENST00000612672 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.57■■■□□ 2.8
MMP28-203ENST00000612672 C4AP0C0L4 1744 aa32.56■■■□□ 2.8
MMP28-203ENST00000612672 BRCA1P38398 1863 aaKnown RBP32.55■■■□□ 2.8
MMP28-203ENST00000612672 HSPA6P17066 643 aa32.55■■■□□ 2.8
MMP28-203ENST00000612672 EIF4A2Q14240 407 aaKnown RBP32.55■■■□□ 2.8
MMP28-203ENST00000612672 IFNL2Q8IZJ0 200 aa32.55■■■□□ 2.8
MMP28-203ENST00000612672 MYH14Q7Z406 1995 aaKnown RBP32.55■■■□□ 2.8
MMP28-203ENST00000612672 MMP10P09238 476 aa32.54■■■□□ 2.8
MMP28-203ENST00000612672 KIF3CO14782 793 aa32.53■■■□□ 2.8
MMP28-203ENST00000612672 C10orf71Q711Q0 1435 aa32.51■■■□□ 2.8
MMP28-203ENST00000612672 TNNT2P45379 298 aaPredicted RBP32.49■■■□□ 2.79
MMP28-203ENST00000612672 KDM6AO15550 1401 aaPredicted RBP32.49■■■□□ 2.79
MMP28-203ENST00000612672 TJP1Q07157 1748 aa32.43■■■□□ 2.78
MMP28-203ENST00000612672 A0A0G2JLW4 131 aa32.43■■■□□ 2.78
MMP28-203ENST00000612672 PLEKHG2Q9H7P9 1386 aa32.43■■■□□ 2.78
MMP28-203ENST00000612672 ARHGEF1Q92888 912 aaKnown RBP32.42■■■□□ 2.78
MMP28-203ENST00000612672 RBM42Q9BTD8 480 aaKnown RBP32.42■■■□□ 2.78
MMP28-203ENST00000612672 RTCBQ9Y3I0 505 aaKnown RBP32.42■■■□□ 2.78
MMP28-203ENST00000612672 GYS1P13807 737 aa32.41■■■□□ 2.78
MMP28-203ENST00000612672 TRAPPC3LQ5T215 181 aa32.41■■■□□ 2.78
MMP28-203ENST00000612672 ARFGEF1Q9Y6D6 1849 aa32.41■■■□□ 2.78
MMP28-203ENST00000612672 BCS1LQ9Y276 419 aa32.4■■■□□ 2.78
MMP28-203ENST00000612672 ERVV-2B6SEH9 535 aa32.39■■■□□ 2.78
MMP28-203ENST00000612672 POLR3GLQ9BT43 218 aa32.39■■■□□ 2.78
MMP28-203ENST00000612672 CNTNAP4Q9C0A0 1308 aa32.39■■■□□ 2.78
MMP28-203ENST00000612672 ADAMTS7Q9UKP4 1686 aa32.38■■■□□ 2.77
MMP28-203ENST00000612672 DPEP1P16444 411 aa32.38■■■□□ 2.77
MMP28-203ENST00000612672 TGFB2P61812 414 aa32.37■■■□□ 2.77
MMP28-203ENST00000612672 RC3H1Q5TC82 1133 aaKnown RBP32.37■■■□□ 2.77
MMP28-203ENST00000612672 AEBP1Q8IUX7 1158 aa32.36■■■□□ 2.77
MMP28-203ENST00000612672 NLGN1Q8N2Q7 840 aa32.36■■■□□ 2.77
MMP28-203ENST00000612672 DCAF5Q96JK2 942 aa32.36■■■□□ 2.77
MMP28-203ENST00000612672 RPS6KA4O75676 772 aa32.34■■■□□ 2.77
MMP28-203ENST00000612672 KCNA3P22001 575 aa32.34■■■□□ 2.77
MMP28-203ENST00000612672 ZNF530Q6P9A1 599 aaPredicted RBP32.34■■■□□ 2.77
MMP28-203ENST00000612672 SCN11AQ9UI33 1791 aa32.33■■■□□ 2.77
MMP28-203ENST00000612672 ADRA2BP18089 450 aa32.33■■■□□ 2.77
MMP28-203ENST00000612672 NMRK2Q9NPI5 230 aa32.32■■■□□ 2.76
MMP28-203ENST00000612672 CCDC87Q9NVE4 849 aa32.32■■■□□ 2.76
MMP28-203ENST00000612672 ARHGAP27Q6ZUM4 889 aa32.31■■■□□ 2.76
MMP28-203ENST00000612672 SRP68Q9UHB9 627 aaKnown RBP32.31■■■□□ 2.76
MMP28-203ENST00000612672 RFC4P35249 363 aa32.3■■■□□ 2.76
MMP28-203ENST00000612672 VIRMAQ69YN4 1812 aaKnown RBP32.29■■■□□ 2.76
MMP28-203ENST00000612672 FCHSD2O94868 740 aa32.29■■■□□ 2.76
MMP28-203ENST00000612672 HSP90AB1P08238 724 aaKnown RBP32.29■■■□□ 2.76
MMP28-203ENST00000612672 CABP4P57796 275 aa32.29■■■□□ 2.76
MMP28-203ENST00000612672 PLEKHO1Q53GL0 409 aaPredicted RBP32.29■■■□□ 2.76
MMP28-203ENST00000612672 WDR90Q96KV7 1748 aa32.29■■■□□ 2.76
MMP28-203ENST00000612672 PTCD1O75127 700 aaKnown RBP32.28■■■□□ 2.76
MMP28-203ENST00000612672 DDR1Q08345 913 aa32.28■■■□□ 2.76
MMP28-203ENST00000612672 TRIM26Q12899 539 aaPredicted RBP32.27■■■□□ 2.76
MMP28-203ENST00000612672 PANK3Q9H999 370 aa32.27■■■□□ 2.76
MMP28-203ENST00000612672 PARP3Q9Y6F1 533 aa32.27■■■□□ 2.76
MMP28-203ENST00000612672 CRKLP46109 303 aaKnown RBP32.26■■■□□ 2.75
MMP28-203ENST00000612672 FKBP8Q14318 412 aa32.26■■■□□ 2.75
MMP28-203ENST00000612672 SBF1O95248 1867 aa32.26■■■□□ 2.75
MMP28-203ENST00000612672 TOMM70O94826 608 aa32.25■■■□□ 2.75
MMP28-203ENST00000612672 DNAJC5GQ8N7S2 189 aa32.25■■■□□ 2.75
MMP28-203ENST00000612672 PCNTO95613 3336 aa32.25■■■□□ 2.75
MMP28-203ENST00000612672 NFATC2IPQ8NCF5 419 aa32.24■■■□□ 2.75
MMP28-203ENST00000612672 USP42Q9H9J4 1324 aaKnown RBP32.24■■■□□ 2.75
MMP28-203ENST00000612672 MTHFSP49914 203 aa32.23■■■□□ 2.75
MMP28-203ENST00000612672 APLP1P51693 650 aa32.23■■■□□ 2.75
MMP28-203ENST00000612672 AMOTQ4VCS5 1084 aa32.23■■■□□ 2.75
MMP28-203ENST00000612672 AFDNP55196 1824 aaKnown RBP32.23■■■□□ 2.75
MMP28-203ENST00000612672 C9orf131Q5VYM1 1079 aa32.22■■■□□ 2.75
MMP28-203ENST00000612672 KCPQ6ZWJ8 1503 aa32.21■■■□□ 2.75
MMP28-203ENST00000612672 TIMELESSQ9UNS1 1208 aa32.21■■■□□ 2.75
MMP28-203ENST00000612672 HSPA5P11021 654 aaKnown RBP32.19■■■□□ 2.74
MMP28-203ENST00000612672 CHRNA5P30532 468 aa32.19■■■□□ 2.74
MMP28-203ENST00000612672 INTS5Q6P9B9 1019 aaKnown RBP32.19■■■□□ 2.74
MMP28-203ENST00000612672 SULT6B1Q6IMI4 303 aa32.18■■■□□ 2.74
MMP28-203ENST00000612672 C1orf141Q5JVX7 400 aa32.17■■■□□ 2.74
MMP28-203ENST00000612672 HTRA3P83110 453 aa32.16■■■□□ 2.74
MMP28-203ENST00000612672 PIM2Q9P1W9 311 aa32.16■■■□□ 2.74
MMP28-203ENST00000612672 NRXN2Q9P2S2 1712 aa32.16■■■□□ 2.74
MMP28-203ENST00000612672 POLRMTO00411 1230 aaKnown RBP32.15■■■□□ 2.74
MMP28-203ENST00000612672 IL13P35225 146 aa32.15■■■□□ 2.74
MMP28-203ENST00000612672 MRC1P22897 1456 aa32.15■■■□□ 2.74
MMP28-203ENST00000612672 TNRC6CQ9HCJ0 1690 aaKnown RBP32.15■■■□□ 2.74
MMP28-203ENST00000612672 DLEC1Q9Y238 1755 aa32.14■■■□□ 2.74
MMP28-203ENST00000612672 MORC1Q86VD1 984 aa32.14■■■□□ 2.74
MMP28-203ENST00000612672 TM4SF1P30408 202 aa32.13■■■□□ 2.73
MMP28-203ENST00000612672 DALRD3Q5D0E6 543 aaKnown RBP32.13■■■□□ 2.73
MMP28-203ENST00000612672 DNAJC10Q8IXB1 793 aa32.13■■■□□ 2.73
MMP28-203ENST00000612672 RBM46Q8TBY0 533 aaKnown RBP32.11■■■□□ 2.73
MMP28-203ENST00000612672 LGR6Q9HBX8 967 aa32.11■■■□□ 2.73
MMP28-203ENST00000612672 RNF181Q9P0P0 153 aa32.11■■■□□ 2.73
MMP28-203ENST00000612672 SOS1Q07889 1333 aaPredicted RBP32.1■■■□□ 2.73
MMP28-203ENST00000612672 EIF4G2P78344 907 aaKnown RBP eCLIP32.1■■■□□ 2.73
MMP28-203ENST00000612672 USPL1Q5W0Q7 1092 aa32.09■■■□□ 2.73
MMP28-203ENST00000612672 UBR2Q8IWV8 1755 aa32.09■■■□□ 2.73
MMP28-203ENST00000612672 SLC39A6Q13433 755 aa32.07■■■□□ 2.72
MMP28-203ENST00000612672 SLC52A2Q9HAB3 445 aa32.07■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms