RNA–Protein interactions for RNA: ENST00000612553.4

PMPCA-207, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2

Gene PMPCA, Length 1,174 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-207ENST00000612553 C1orf141Q5JVX7 400 aa28.14■■■□□ 2.1
PMPCA-207ENST00000612553 LINC00116Q8NCU8 138 aa28.14■■■□□ 2.1
PMPCA-207ENST00000612553 KDM6AO15550 1401 aaPredicted RBP28.12■■■□□ 2.09
PMPCA-207ENST00000612553 SSFA2P28290 1259 aa28.12■■■□□ 2.09
PMPCA-207ENST00000612553 ITPK1Q13572 414 aa28.12■■■□□ 2.09
PMPCA-207ENST00000612553 CC2D1BQ5T0F9 858 aaKnown RBP28.12■■■□□ 2.09
PMPCA-207ENST00000612553 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.11■■■□□ 2.09
PMPCA-207ENST00000612553 PHF14O94880 888 aa28.11■■■□□ 2.09
PMPCA-207ENST00000612553 GPR162Q16538 588 aa28.11■■■□□ 2.09
PMPCA-207ENST00000612553 AMIGO3Q86WK7 504 aa28.11■■■□□ 2.09
PMPCA-207ENST00000612553 CABP4P57796 275 aa28.1■■■□□ 2.09
PMPCA-207ENST00000612553 NLGN2Q8NFZ4 835 aa28.09■■■□□ 2.09
PMPCA-207ENST00000612553 ZNF831Q5JPB2 1677 aa28.08■■■□□ 2.09
PMPCA-207ENST00000612553 CHD4Q14839 1912 aa28.08■■■□□ 2.09
PMPCA-207ENST00000612553 GNPATO15228 680 aa28.07■■■□□ 2.08
PMPCA-207ENST00000612553 SMIM5Q71RC9 77 aa28.07■■■□□ 2.08
PMPCA-207ENST00000612553 RBM42Q9BTD8 480 aaKnown RBP28.07■■■□□ 2.08
PMPCA-207ENST00000612553 NPC1L1Q9UHC9 1359 aa28.07■■■□□ 2.08
PMPCA-207ENST00000612553 DIAPH1O60610 1272 aaKnown RBP28.04■■■□□ 2.08
PMPCA-207ENST00000612553 PELP1Q8IZL8 1130 aaKnown RBP28.04■■■□□ 2.08
PMPCA-207ENST00000612553 SLC4A9Q96Q91 983 aa28.04■■■□□ 2.08
PMPCA-207ENST00000612553 AKAP4Q5JQC9 854 aa28.03■■■□□ 2.08
PMPCA-207ENST00000612553 NFATC2IPQ8NCF5 419 aa28.03■■■□□ 2.08
PMPCA-207ENST00000612553 CD2APQ9Y5K6 639 aa28.03■■■□□ 2.08
PMPCA-207ENST00000612553 GOLGB1Q14789 3259 aaKnown RBP28.03■■■□□ 2.08
PMPCA-207ENST00000612553 SCN11AQ9UI33 1791 aa28.02■■■□□ 2.08
PMPCA-207ENST00000612553 HMOX1P09601 288 aa28.02■■■□□ 2.08
PMPCA-207ENST00000612553 COL5A3P25940 1745 aaPredicted RBP28.01■■■□□ 2.07
PMPCA-207ENST00000612553 CNGB1Q14028 1251 aaPredicted RBP28■■■□□ 2.07
PMPCA-207ENST00000612553 RC3H1Q5TC82 1133 aaKnown RBP28■■■□□ 2.07
PMPCA-207ENST00000612553 RTCBQ9Y3I0 505 aaKnown RBP28■■■□□ 2.07
PMPCA-207ENST00000612553 PTCD1O75127 700 aaKnown RBP27.98■■■□□ 2.07
PMPCA-207ENST00000612553 TRAPPC3LQ5T215 181 aa27.98■■■□□ 2.07
PMPCA-207ENST00000612553 CNTNAP4Q9C0A0 1308 aa27.97■■■□□ 2.07
PMPCA-207ENST00000612553 ZNF784Q8NCA9 323 aaPredicted RBP27.97■■■□□ 2.07
PMPCA-207ENST00000612553 GRIN3BO60391 1043 aa27.95■■■□□ 2.06
PMPCA-207ENST00000612553 ADRA2BP18089 450 aa27.95■■■□□ 2.06
PMPCA-207ENST00000612553 RPS6KA4O75676 772 aa27.94■■■□□ 2.06
PMPCA-207ENST00000612553 YBX3P16989 372 aaKnown RBP eCLIP27.94■■■□□ 2.06
PMPCA-207ENST00000612553 MTHFSDQ2M296 383 aaKnown RBP27.94■■■□□ 2.06
PMPCA-207ENST00000612553 SLC52A2Q9HAB3 445 aa27.94■■■□□ 2.06
PMPCA-207ENST00000612553 LGR6Q9HBX8 967 aa27.94■■■□□ 2.06
PMPCA-207ENST00000612553 COL3A1P02461 1466 aaPredicted RBP27.94■■■□□ 2.06
PMPCA-207ENST00000612553 RNMTO43148 476 aaKnown RBP27.92■■■□□ 2.06
PMPCA-207ENST00000612553 ARHGEF1Q92888 912 aaKnown RBP27.92■■■□□ 2.06
PMPCA-207ENST00000612553 VIRMAQ69YN4 1812 aaKnown RBP27.92■■■□□ 2.06
PMPCA-207ENST00000612553 NLGN1Q8N2Q7 840 aa27.91■■■□□ 2.06
PMPCA-207ENST00000612553 CICQ96RK0 1608 aaPredicted RBP27.91■■■□□ 2.06
PMPCA-207ENST00000612553 MYH14Q7Z406 1995 aaKnown RBP27.91■■■□□ 2.06
PMPCA-207ENST00000612553 MRC1P22897 1456 aa27.9■■■□□ 2.06
PMPCA-207ENST00000612553 U2SURPO15042 1029 aaKnown RBP27.9■■■□□ 2.06
PMPCA-207ENST00000612553 RFC4P35249 363 aa27.9■■■□□ 2.06
PMPCA-207ENST00000612553 TJP1Q07157 1748 aa27.89■■■□□ 2.06
PMPCA-207ENST00000612553 MMP10P09238 476 aa27.89■■■□□ 2.06
PMPCA-207ENST00000612553 CRKLP46109 303 aaKnown RBP27.89■■■□□ 2.06
PMPCA-207ENST00000612553 ADAMTS7Q9UKP4 1686 aa27.88■■■□□ 2.05
PMPCA-207ENST00000612553 CFAP53Q96M91 514 aa27.86■■■□□ 2.05
PMPCA-207ENST00000612553 C4AP0C0L4 1744 aa27.85■■■□□ 2.05
PMPCA-207ENST00000612553 GYS1P13807 737 aa27.85■■■□□ 2.05
PMPCA-207ENST00000612553 SLC39A6Q13433 755 aa27.84■■■□□ 2.05
PMPCA-207ENST00000612553 GAS2L2Q8NHY3 880 aa27.83■■■□□ 2.05
PMPCA-207ENST00000612553 DNAJC10Q8IXB1 793 aa27.82■■■□□ 2.04
PMPCA-207ENST00000612553 INTS5Q6P9B9 1019 aaKnown RBP27.81■■■□□ 2.04
PMPCA-207ENST00000612553 KIF13BQ9NQT8 1826 aa27.81■■■□□ 2.04
PMPCA-207ENST00000612553 GNAT3A8MTJ3 354 aa27.8■■■□□ 2.04
PMPCA-207ENST00000612553 CCDC87Q9NVE4 849 aa27.8■■■□□ 2.04
PMPCA-207ENST00000612553 KCPQ6ZWJ8 1503 aa27.8■■■□□ 2.04
PMPCA-207ENST00000612553 NUDCQ9Y266 331 aa27.79■■■□□ 2.04
PMPCA-207ENST00000612553 PARP3Q9Y6F1 533 aa27.79■■■□□ 2.04
PMPCA-207ENST00000612553 USP42Q9H9J4 1324 aaKnown RBP27.78■■■□□ 2.04
PMPCA-207ENST00000612553 PPP2R1AP30153 589 aa27.78■■■□□ 2.04
PMPCA-207ENST00000612553 VSIG10Q8N0Z9 540 aa27.78■■■□□ 2.04
PMPCA-207ENST00000612553 CYP19A1P11511 503 aaPredicted RBP27.77■■■□□ 2.04
PMPCA-207ENST00000612553 TGFB2P61812 414 aa27.77■■■□□ 2.04
PMPCA-207ENST00000612553 SRP68Q9UHB9 627 aaKnown RBP27.77■■■□□ 2.04
PMPCA-207ENST00000612553 WWC3Q9ULE0 1092 aa27.77■■■□□ 2.04
PMPCA-207ENST00000612553 C10orf71Q711Q0 1435 aa27.76■■■□□ 2.04
PMPCA-207ENST00000612553 TEFQ10587 303 aa27.76■■■□□ 2.03
PMPCA-207ENST00000612553 IL17REQ8NFR9 667 aa27.76■■■□□ 2.03
PMPCA-207ENST00000612553 UBR2Q8IWV8 1755 aa27.76■■■□□ 2.03
PMPCA-207ENST00000612553 PRKAR2BP31323 418 aa27.75■■■□□ 2.03
PMPCA-207ENST00000612553 TTC5Q8N0Z6 440 aa27.75■■■□□ 2.03
PMPCA-207ENST00000612553 RSPH6AQ9H0K4 717 aa27.75■■■□□ 2.03
PMPCA-207ENST00000612553 PXDNLA1KZ92 1463 aa27.75■■■□□ 2.03
PMPCA-207ENST00000612553 FKBP8Q14318 412 aa27.74■■■□□ 2.03
PMPCA-207ENST00000612553 KIAA1551Q9HCM1 1747 aa27.74■■■□□ 2.03
PMPCA-207ENST00000612553 SOS1Q07889 1333 aaPredicted RBP27.73■■■□□ 2.03
PMPCA-207ENST00000612553 PHACTR3Q96KR7 559 aa27.73■■■□□ 2.03
PMPCA-207ENST00000612553 N4BP2Q86UW6 1770 aaPredicted RBP27.73■■■□□ 2.03
PMPCA-207ENST00000612553 ZPR1O75312 459 aa27.72■■■□□ 2.03
PMPCA-207ENST00000612553 SIPA1L3O60292 1781 aaPredicted RBP27.71■■■□□ 2.03
PMPCA-207ENST00000612553 U2AF1L5P0DN76 240 aaPredicted RBP27.71■■■□□ 2.03
PMPCA-207ENST00000612553 U2AF1Q01081 240 aaKnown RBP eCLIP27.71■■■□□ 2.03
PMPCA-207ENST00000612553 A0A0G2JLW4 131 aa27.7■■■□□ 2.02
PMPCA-207ENST00000612553 ZNF790Q6PG37 636 aa27.7■■■□□ 2.02
PMPCA-207ENST00000612553 ZBTB1Q9Y2K1 713 aa27.7■■■□□ 2.02
PMPCA-207ENST00000612553 STARD3NLO95772 234 aa27.69■■■□□ 2.02
PMPCA-207ENST00000612553 USPL1Q5W0Q7 1092 aa27.69■■■□□ 2.02
PMPCA-207ENST00000612553 COL15A1P39059 1388 aa27.69■■■□□ 2.02
PMPCA-207ENST00000612553 CEMIPQ8WUJ3 1361 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 146.8 ms