RNA–Protein interactions for RNA: ENST00000612303.1

NEAT1-204, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 3 BASIC

Gene NEAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-204ENST00000612303 BTBD11A6QL63 1104 aa17.13■□□□□ 0.33
NEAT1-204ENST00000612303 ERVV-2B6SEH9 535 aa17.13■□□□□ 0.33
NEAT1-204ENST00000612303 EXOC5O00471 708 aa17.13■□□□□ 0.33
NEAT1-204ENST00000612303 SSH1Q8WYL5 1049 aa17.13■□□□□ 0.33
NEAT1-204ENST00000612303 CHMP4AQ9BY43 222 aa17.13■□□□□ 0.33
NEAT1-204ENST00000612303 PDE3AQ14432 1141 aa17.12■□□□□ 0.33
NEAT1-204ENST00000612303 MEX3CQ5U5Q3 659 aaKnown RBP17.12■□□□□ 0.33
NEAT1-204ENST00000612303 SMC4Q9NTJ3 1288 aa17.12■□□□□ 0.33
NEAT1-204ENST00000612303 CACNA1FO60840 1977 aa17.11■□□□□ 0.33
NEAT1-204ENST00000612303 PLIN1O60240 522 aa17.11■□□□□ 0.33
NEAT1-204ENST00000612303 HOXB7P09629 217 aa17.11■□□□□ 0.33
NEAT1-204ENST00000612303 MS4A1P11836 297 aa17.11■□□□□ 0.33
NEAT1-204ENST00000612303 EIF4A1P60842 406 aaKnown RBP17.11■□□□□ 0.33
NEAT1-204ENST00000612303 IRX6P78412 446 aaPredicted RBP17.11■□□□□ 0.33
NEAT1-204ENST00000612303 DDX54Q8TDD1 881 aaKnown RBP17.11■□□□□ 0.33
NEAT1-204ENST00000612303 USP21Q9UK80 565 aa17.11■□□□□ 0.33
NEAT1-204ENST00000612303 ELL2O00472 640 aaPredicted RBP17.1■□□□□ 0.33
NEAT1-204ENST00000612303 IPO8O15397 1037 aaKnown RBP17.1■□□□□ 0.33
NEAT1-204ENST00000612303 CCDC9Q9Y3X0 531 aaKnown RBP17.1■□□□□ 0.33
NEAT1-204ENST00000612303 KIF16BQ96L93 1317 aa17.1■□□□□ 0.33
NEAT1-204ENST00000612303 TNS2Q63HR2 1409 aa17.1■□□□□ 0.33
NEAT1-204ENST00000612303 CABP4P57796 275 aa17.09■□□□□ 0.33
NEAT1-204ENST00000612303 MRPL50Q8N5N7 158 aaKnown RBP17.09■□□□□ 0.33
NEAT1-204ENST00000612303 NFATC2IPQ8NCF5 419 aa17.09■□□□□ 0.33
NEAT1-204ENST00000612303 HEG1Q9ULI3 1381 aa17.08■□□□□ 0.32
NEAT1-204ENST00000612303 CANXP27824 592 aaKnown RBP17.08■□□□□ 0.32
NEAT1-204ENST00000612303 DDB1Q16531 1140 aa17.08■□□□□ 0.32
NEAT1-204ENST00000612303 KRT24Q2M2I5 525 aa17.08■□□□□ 0.32
NEAT1-204ENST00000612303 ZKSCAN2Q63HK3 967 aa17.08■□□□□ 0.32
NEAT1-204ENST00000612303 ARHGAP45Q92619 1136 aa17.08■□□□□ 0.32
NEAT1-204ENST00000612303 BCL2L13Q9BXK5 485 aa17.07■□□□□ 0.32
NEAT1-204ENST00000612303 AFF2P51816 1311 aa17.06■□□□□ 0.32
NEAT1-204ENST00000612303 CCDC30Q5VVM6 783 aa17.06■□□□□ 0.32
NEAT1-204ENST00000612303 ZNF790Q6PG37 636 aa17.06■□□□□ 0.32
NEAT1-204ENST00000612303 FRAT1Q92837 279 aaPredicted RBP17.06■□□□□ 0.32
NEAT1-204ENST00000612303 PPP4R2Q9NY27 417 aa17.06■□□□□ 0.32
NEAT1-204ENST00000612303 KCNQ3O43525 872 aa17.05■□□□□ 0.32
NEAT1-204ENST00000612303 ATF7IPQ6VMQ6 1270 aa17.05■□□□□ 0.32
NEAT1-204ENST00000612303 C20orf194Q5TEA3 1177 aa17.04■□□□□ 0.32
NEAT1-204ENST00000612303 TRPC5Q9UL62 973 aaPredicted RBP17.04■□□□□ 0.32
NEAT1-204ENST00000612303 NOB1Q9ULX3 412 aaKnown RBP17.04■□□□□ 0.32
NEAT1-204ENST00000612303 ATRNO75882 1429 aa17.04■□□□□ 0.32
NEAT1-204ENST00000612303 GIGYF1O75420 1035 aaPredicted RBP17.03■□□□□ 0.32
NEAT1-204ENST00000612303 TTC5Q8N0Z6 440 aa17.03■□□□□ 0.32
NEAT1-204ENST00000612303 FBXO41Q8TF61 875 aa17.03■□□□□ 0.32
NEAT1-204ENST00000612303 GJD4Q96KN9 370 aaPredicted RBP17.03■□□□□ 0.32
NEAT1-204ENST00000612303 STK31Q9BXU1 1019 aa17.03■□□□□ 0.32
NEAT1-204ENST00000612303 TOGARAM1Q9Y4F4 1720 aa17.02■□□□□ 0.32
NEAT1-204ENST00000612303 ONECUT3O60422 494 aaPredicted RBP17.02■□□□□ 0.32
NEAT1-204ENST00000612303 AAMPQ13685 434 aa17.02■□□□□ 0.32
NEAT1-204ENST00000612303 FAM98CQ17RN3 349 aaKnown RBP17.02■□□□□ 0.32
NEAT1-204ENST00000612303 DZIP1LQ8IYY4 767 aaKnown RBP17.02■□□□□ 0.32
NEAT1-204ENST00000612303 EXOC6Q8TAG9 804 aa17.02■□□□□ 0.32
NEAT1-204ENST00000612303 CRBNQ96SW2 442 aa17.02■□□□□ 0.32
NEAT1-204ENST00000612303 API5Q9BZZ5 524 aaKnown RBP17.02■□□□□ 0.32
NEAT1-204ENST00000612303 TMOD3Q9NYL9 352 aa17.02■□□□□ 0.32
NEAT1-204ENST00000612303 ITGB4P16144 1822 aa17.02■□□□□ 0.31
NEAT1-204ENST00000612303 PTPRCP08575 1304 aa17.01■□□□□ 0.31
NEAT1-204ENST00000612303 SLC4A2P04920 1241 aa17.01■□□□□ 0.31
NEAT1-204ENST00000612303 TRIM27P14373 513 aa17.01■□□□□ 0.31
NEAT1-204ENST00000612303 SLC39A6Q13433 755 aa17.01■□□□□ 0.31
NEAT1-204ENST00000612303 HDGFL1Q5TGJ6 251 aa17.01■□□□□ 0.31
NEAT1-204ENST00000612303 FMNL2Q96PY5 1086 aa17.01■□□□□ 0.31
NEAT1-204ENST00000612303 KAT6BQ8WYB5 2073 aa17■□□□□ 0.31
NEAT1-204ENST00000612303 MARCH10Q8NA82 808 aaPredicted RBP17■□□□□ 0.31
NEAT1-204ENST00000612303 THSD7AQ9UPZ6 1657 aa17■□□□□ 0.31
NEAT1-204ENST00000612303 PAPPAQ13219 1627 aa16.99■□□□□ 0.31
NEAT1-204ENST00000612303 GLI3P10071 1580 aa16.99■□□□□ 0.31
NEAT1-204ENST00000612303 TCERG1O14776 1098 aaKnown RBP16.99■□□□□ 0.31
NEAT1-204ENST00000612303 SNRPA1P09661 255 aaKnown RBP16.99■□□□□ 0.31
NEAT1-204ENST00000612303 FTSJ3Q8IY81 847 aaKnown RBP16.99■□□□□ 0.31
NEAT1-204ENST00000612303 PANK1Q8TE04 598 aa16.99■□□□□ 0.31
NEAT1-204ENST00000612303 UBR2Q8IWV8 1755 aa16.99■□□□□ 0.31
NEAT1-204ENST00000612303 ZNF496Q96IT1 587 aaPredicted RBP16.98■□□□□ 0.31
NEAT1-204ENST00000612303 QTRT2Q9H974 415 aaKnown RBP16.98■□□□□ 0.31
NEAT1-204ENST00000612303 BCL9O00512 1426 aa16.97■□□□□ 0.31
NEAT1-204ENST00000612303 RLBP1P12271 317 aa16.97■□□□□ 0.31
NEAT1-204ENST00000612303 PIGBQ92521 554 aa16.97■□□□□ 0.31
NEAT1-204ENST00000612303 DBF4Q9UBU7 674 aaPredicted RBP16.97■□□□□ 0.31
NEAT1-204ENST00000612303 EIF2S2P20042 333 aaKnown RBP16.96■□□□□ 0.31
NEAT1-204ENST00000612303 MVPQ14764 893 aaKnown RBP16.96■□□□□ 0.31
NEAT1-204ENST00000612303 CLUAP1Q96AJ1 413 aa16.96■□□□□ 0.31
NEAT1-204ENST00000612303 COG6Q9Y2V7 657 aa16.96■□□□□ 0.31
NEAT1-204ENST00000612303 PRIM1P49642 420 aaKnown RBP16.95■□□□□ 0.3
NEAT1-204ENST00000612303 ZNF772Q68DY9 489 aaPredicted RBP16.95■□□□□ 0.3
NEAT1-204ENST00000612303 VSIG10Q8N0Z9 540 aa16.95■□□□□ 0.3
NEAT1-204ENST00000612303 CHMP4BQ9H444 224 aaKnown RBP16.95■□□□□ 0.3
NEAT1-204ENST00000612303 DDX19BQ9UMR2 479 aa16.95■□□□□ 0.3
NEAT1-204ENST00000612303 TNNQ9UQP3 1299 aa16.95■□□□□ 0.3
NEAT1-204ENST00000612303 DOT1LQ8TEK3 1739 aa16.95■□□□□ 0.3
NEAT1-204ENST00000612303 KCPQ6ZWJ8 1503 aa16.95■□□□□ 0.3
NEAT1-204ENST00000612303 ABCC4O15439 1325 aa16.95■□□□□ 0.3
NEAT1-204ENST00000612303 TEX13AQ9BXU3 409 aaPredicted RBP16.94■□□□□ 0.3
NEAT1-204ENST00000612303 ATG3Q9NT62 314 aa16.94■□□□□ 0.3
NEAT1-204ENST00000612303 ERBB4Q15303 1308 aa16.94■□□□□ 0.3
NEAT1-204ENST00000612303 LAMB4A4D0S4 1761 aa16.93■□□□□ 0.3
NEAT1-204ENST00000612303 FLIIQ13045 1269 aa16.93■□□□□ 0.3
NEAT1-204ENST00000612303 G2E3Q7L622 706 aa16.93■□□□□ 0.3
NEAT1-204ENST00000612303 TMEM57Q8N5G2 664 aa16.93■□□□□ 0.3
NEAT1-204ENST00000612303 NECTIN2Q92692 538 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms