RNA–Protein interactions for RNA: ENST00000610404.4

TTR-204, Transcript of transthyretin, humanhuman

TSL 5 BASIC

Gene TTR, Length 1,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-204ENST00000610404 ARHGEF28Q8N1W1 1705 aaKnown RBP12.89□□□□□ -0.35
TTR-204ENST00000610404 DCAF11Q8TEB1 546 aa12.89□□□□□ -0.35
TTR-204ENST00000610404 DDX12PQ92771 950 aa12.89□□□□□ -0.35
TTR-204ENST00000610404 NUDT16Q96DE0 195 aaKnown RBP12.89□□□□□ -0.35
TTR-204ENST00000610404 PARD3Q8TEW0 1356 aa12.89□□□□□ -0.35
TTR-204ENST00000610404 RREB1Q92766 1687 aa12.89□□□□□ -0.35
TTR-204ENST00000610404 SSH2Q76I76 1423 aa12.88□□□□□ -0.35
TTR-204ENST00000610404 ITSN1Q15811 1721 aa12.88□□□□□ -0.35
TTR-204ENST00000610404 NUP188Q5SRE5 1749 aa12.88□□□□□ -0.35
TTR-204ENST00000610404 RAB3GAP2Q9H2M9 1393 aa12.88□□□□□ -0.35
TTR-204ENST00000610404 CAMTA1Q9Y6Y1 1673 aa12.87□□□□□ -0.35
TTR-204ENST00000610404 NRKQ7Z2Y5 1582 aa12.87□□□□□ -0.35
TTR-204ENST00000610404 SOWAHBA6NEL2 793 aa12.87□□□□□ -0.35
TTR-204ENST00000610404 BARGINQ6ZT62 677 aa12.87□□□□□ -0.35
TTR-204ENST00000610404 ZFRQ96KR1 1074 aaKnown RBP12.87□□□□□ -0.35
TTR-204ENST00000610404 POLR3AO14802 1390 aaPredicted RBP12.86□□□□□ -0.35
TTR-204ENST00000610404 SPDYE16A6NNV3 312 aaPredicted RBP12.86□□□□□ -0.35
TTR-204ENST00000610404 TRIM6-TRIM34B2RNG4 842 aa12.86□□□□□ -0.35
TTR-204ENST00000610404 PDIA6Q15084 440 aa12.86□□□□□ -0.35
TTR-204ENST00000610404 LARP1Q6PKG0 1096 aaKnown RBP12.86□□□□□ -0.35
TTR-204ENST00000610404 TOPAZ1Q8N9V7 1692 aa12.86□□□□□ -0.35
TTR-204ENST00000610404 PDE3BQ13370 1112 aa12.85□□□□□ -0.35
TTR-204ENST00000610404 CDK19Q9BWU1 502 aa12.85□□□□□ -0.35
TTR-204ENST00000610404 LMO7Q8WWI1 1683 aa12.85□□□□□ -0.35
TTR-204ENST00000610404 ACEP12821 1306 aa12.85□□□□□ -0.35
TTR-204ENST00000610404 BCAMP50895 628 aa12.84□□□□□ -0.35
TTR-204ENST00000610404 EVA1CP58658 441 aa12.84□□□□□ -0.35
TTR-204ENST00000610404 NBPF8Q3BBV2 869 aa12.84□□□□□ -0.35
TTR-204ENST00000610404 NYAP1Q6ZVC0 841 aa12.84□□□□□ -0.35
TTR-204ENST00000610404 TCP11L2Q8N4U5 519 aa12.84□□□□□ -0.35
TTR-204ENST00000610404 USP19O94966 1318 aa12.84□□□□□ -0.35
TTR-204ENST00000610404 CPDO75976 1380 aa12.83□□□□□ -0.36
TTR-204ENST00000610404 YY1P25490 414 aa12.83□□□□□ -0.36
TTR-204ENST00000610404 AMER1Q5JTC6 1135 aaPredicted RBP12.83□□□□□ -0.36
TTR-204ENST00000610404 PLEKHG3A1L390 1219 aa12.82□□□□□ -0.36
TTR-204ENST00000610404 NBR1Q14596 966 aa12.82□□□□□ -0.36
TTR-204ENST00000610404 NBPF14Q5TI25 921 aa12.82□□□□□ -0.36
TTR-204ENST00000610404 ABTB2Q8N961 1025 aa12.82□□□□□ -0.36
TTR-204ENST00000610404 SEPT9Q9UHD8 586 aaPredicted RBP12.82□□□□□ -0.36
TTR-204ENST00000610404 COL5A2P05997 1499 aaPredicted RBP12.81□□□□□ -0.36
TTR-204ENST00000610404 ITGBL1O95965 494 aaPredicted RBP12.81□□□□□ -0.36
TTR-204ENST00000610404 PARP4Q9UKK3 1724 aaKnown RBP12.81□□□□□ -0.36
TTR-204ENST00000610404 MAP3K7O43318 606 aa12.8□□□□□ -0.36
TTR-204ENST00000610404 E2F4Q16254 413 aa12.8□□□□□ -0.36
TTR-204ENST00000610404 SPON1Q9HCB6 807 aa12.8□□□□□ -0.36
TTR-204ENST00000610404 PEAK1Q9H792 1746 aa12.79□□□□□ -0.36
TTR-204ENST00000610404 KCNQ2O43526 872 aa12.79□□□□□ -0.36
TTR-204ENST00000610404 GCP02774 474 aa12.79□□□□□ -0.36
TTR-204ENST00000610404 THRAP3Q9Y2W1 955 aaKnown RBP12.79□□□□□ -0.36
TTR-204ENST00000610404 PTF1AQ7RTS3 328 aa12.78□□□□□ -0.36
TTR-204ENST00000610404 PACS2Q86VP3 889 aa12.78□□□□□ -0.36
TTR-204ENST00000610404 WDR70Q9NW82 654 aa12.78□□□□□ -0.36
TTR-204ENST00000610404 PPP1R1BQ9UD71 204 aaPredicted RBP12.78□□□□□ -0.36
TTR-204ENST00000610404 NINLQ9Y2I6 1382 aa12.78□□□□□ -0.36
TTR-204ENST00000610404 OVOS2A0A0G2JMS6 1433 aa12.78□□□□□ -0.36
TTR-204ENST00000610404 OVOS2A0A0J9YW53 1432 aa12.78□□□□□ -0.36
TTR-204ENST00000610404 OVOS2Q6IE36 1432 aa12.78□□□□□ -0.36
TTR-204ENST00000610404 LRRC37A3O60309 1634 aa12.77□□□□□ -0.36
TTR-204ENST00000610404 NLRP13Q86W25 1043 aa12.77□□□□□ -0.37
TTR-204ENST00000610404 WBP1LQ9NX94 342 aa12.77□□□□□ -0.37
TTR-204ENST00000610404 ARIH1Q9Y4X5 557 aaPredicted RBP12.77□□□□□ -0.37
TTR-204ENST00000610404 CRB1P82279 1406 aa12.77□□□□□ -0.37
TTR-204ENST00000610404 PPIP5K1Q6PFW1 1433 aa12.77□□□□□ -0.37
TTR-204ENST00000610404 ZBTB7CA1YPR0 619 aa12.76□□□□□ -0.37
TTR-204ENST00000610404 TSR1Q2NL82 804 aaKnown RBP12.76□□□□□ -0.37
TTR-204ENST00000610404 NBPF1Q3BBV0 1214 aa12.76□□□□□ -0.37
TTR-204ENST00000610404 RGPD3A6NKT7 1758 aaPredicted RBP12.75□□□□□ -0.37
TTR-204ENST00000610404 SLIT3O75094 1523 aa12.75□□□□□ -0.37
TTR-204ENST00000610404 RGPD4Q7Z3J3 1758 aa12.75□□□□□ -0.37
TTR-204ENST00000610404 CASZ1Q86V15 1759 aa12.75□□□□□ -0.37
TTR-204ENST00000610404 SBF2Q86WG5 1849 aa12.75□□□□□ -0.37
TTR-204ENST00000610404 LRCH3Q96II8 777 aa12.75□□□□□ -0.37
TTR-204ENST00000610404 PDGFDQ9GZP0 370 aaPredicted RBP12.75□□□□□ -0.37
TTR-204ENST00000610404 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.75□□□□□ -0.37
TTR-204ENST00000610404 KIAA1210Q9ULL0 1709 aa12.74□□□□□ -0.37
TTR-204ENST00000610404 AATKQ6ZMQ8 1374 aa12.74□□□□□ -0.37
TTR-204ENST00000610404 PLSCR1O15162 318 aa12.74□□□□□ -0.37
TTR-204ENST00000610404 SRPK2P78362 688 aaKnown RBP12.74□□□□□ -0.37
TTR-204ENST00000610404 PAXIP1Q6ZW49 1069 aaPredicted RBP12.74□□□□□ -0.37
TTR-204ENST00000610404 CFAP44Q96MT7 982 aa12.74□□□□□ -0.37
TTR-204ENST00000610404 TSR3Q9UJK0 312 aaKnown RBP12.74□□□□□ -0.37
TTR-204ENST00000610404 TSKSQ9UJT2 592 aa12.74□□□□□ -0.37
TTR-204ENST00000610404 USP6P35125 1406 aa12.73□□□□□ -0.37
TTR-204ENST00000610404 C11orf95C9JLR9 678 aaPredicted RBP12.73□□□□□ -0.37
TTR-204ENST00000610404 DDB1Q16531 1140 aa12.73□□□□□ -0.37
TTR-204ENST00000610404 COL18A1P39060 1754 aa12.73□□□□□ -0.37
TTR-204ENST00000610404 TOM1L2Q6ZVM7 507 aa12.72□□□□□ -0.37
TTR-204ENST00000610404 MARCH10Q8NA82 808 aaPredicted RBP12.72□□□□□ -0.37
TTR-204ENST00000610404 HPS5Q9UPZ3 1129 aa12.72□□□□□ -0.37
TTR-204ENST00000610404 WNK3Q9BYP7 1800 aa12.72□□□□□ -0.37
TTR-204ENST00000610404 BRD4O60885 1362 aaPredicted RBP12.71□□□□□ -0.37
TTR-204ENST00000610404 CENPJQ9HC77 1338 aaPredicted RBP12.71□□□□□ -0.37
TTR-204ENST00000610404 ZBTB7AO95365 584 aa12.71□□□□□ -0.37
TTR-204ENST00000610404 CABP1Q9NZU7 370 aa12.71□□□□□ -0.37
TTR-204ENST00000610404 PIK3C2AO00443 1686 aa12.7□□□□□ -0.38
TTR-204ENST00000610404 MYOM1P52179 1685 aa12.7□□□□□ -0.38
TTR-204ENST00000610404 KCNC4Q03721 635 aa12.7□□□□□ -0.38
TTR-204ENST00000610404 CDCA7LQ96GN5 454 aa12.7□□□□□ -0.38
TTR-204ENST00000610404 IRX2Q9BZI1 471 aaPredicted RBP12.7□□□□□ -0.38
TTR-204ENST00000610404 CPSF1Q10570 1443 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms