RNA–Protein interactions for RNA: ENST00000609143.5

LINC01278-204, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 1 (best) BASIC

Gene LINC01278, Length 2,768 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-204ENST00000609143 C1orf115Q9H7X2 142 aa14.4□□□□□ -0.1
LINC01278-204ENST00000609143 PLEKHG2Q9H7P9 1386 aa14.4□□□□□ -0.1
LINC01278-204ENST00000609143 IPO9Q96P70 1041 aaKnown RBP14.4□□□□□ -0.1
LINC01278-204ENST00000609143 HOXB7P09629 217 aa14.39□□□□□ -0.11
LINC01278-204ENST00000609143 TATP17735 454 aaPredicted RBP14.39□□□□□ -0.11
LINC01278-204ENST00000609143 CHRNA2Q15822 529 aa14.39□□□□□ -0.11
LINC01278-204ENST00000609143 G2E3Q7L622 706 aa14.39□□□□□ -0.11
LINC01278-204ENST00000609143 GCC1Q96CN9 775 aa14.39□□□□□ -0.11
LINC01278-204ENST00000609143 CCT4P50991 539 aaKnown RBP14.39□□□□□ -0.11
LINC01278-204ENST00000609143 BTBD11A6QL63 1104 aa14.38□□□□□ -0.11
LINC01278-204ENST00000609143 EIF4A1P60842 406 aaKnown RBP14.38□□□□□ -0.11
LINC01278-204ENST00000609143 HDGFL1Q5TGJ6 251 aa14.38□□□□□ -0.11
LINC01278-204ENST00000609143 FLIIQ13045 1269 aa14.38□□□□□ -0.11
LINC01278-204ENST00000609143 NUCB1Q02818 461 aa14.37□□□□□ -0.11
LINC01278-204ENST00000609143 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.37□□□□□ -0.11
LINC01278-204ENST00000609143 SPG7Q9UQ90 795 aa14.37□□□□□ -0.11
LINC01278-204ENST00000609143 ADAMTS7Q9UKP4 1686 aa14.37□□□□□ -0.11
LINC01278-204ENST00000609143 NECTIN2Q92692 538 aa14.37□□□□□ -0.11
LINC01278-204ENST00000609143 FKBP5Q13451 457 aaPredicted RBP14.36□□□□□ -0.11
LINC01278-204ENST00000609143 SLC4A10Q6U841 1118 aa14.36□□□□□ -0.11
LINC01278-204ENST00000609143 PRDM11Q9NQV5 511 aa14.36□□□□□ -0.11
LINC01278-204ENST00000609143 NHSL1Q5SYE7 1610 aa14.36□□□□□ -0.11
LINC01278-204ENST00000609143 SIRT2Q8IXJ6 389 aa14.35□□□□□ -0.11
LINC01278-204ENST00000609143 MEGF6O75095 1541 aa14.35□□□□□ -0.11
LINC01278-204ENST00000609143 SIPA1L3O60292 1781 aaPredicted RBP14.35□□□□□ -0.11
LINC01278-204ENST00000609143 F6X3S4 739 aa14.35□□□□□ -0.11
LINC01278-204ENST00000609143 CHD1LQ86WJ1 897 aa14.35□□□□□ -0.11
LINC01278-204ENST00000609143 RPAP2Q8IXW5 612 aaPredicted RBP14.35□□□□□ -0.11
LINC01278-204ENST00000609143 ANKRD44Q8N8A2 993 aa14.34□□□□□ -0.11
LINC01278-204ENST00000609143 NOP58Q9Y2X3 529 aaKnown RBP14.34□□□□□ -0.11
LINC01278-204ENST00000609143 PXDNLA1KZ92 1463 aa14.34□□□□□ -0.11
LINC01278-204ENST00000609143 MEIS3Q99687 375 aa14.34□□□□□ -0.11
LINC01278-204ENST00000609143 ATP10DQ9P241 1426 aa14.33□□□□□ -0.11
LINC01278-204ENST00000609143 ABCA3Q99758 1704 aa14.33□□□□□ -0.11
LINC01278-204ENST00000609143 KCNQ3O43525 872 aa14.33□□□□□ -0.12
LINC01278-204ENST00000609143 PHKG2P15735 406 aa14.33□□□□□ -0.12
LINC01278-204ENST00000609143 EIF2S2P20042 333 aaKnown RBP14.33□□□□□ -0.12
LINC01278-204ENST00000609143 ANKRD45Q5TZF3 282 aa14.33□□□□□ -0.12
LINC01278-204ENST00000609143 IFNL2Q8IZJ0 200 aa14.33□□□□□ -0.12
LINC01278-204ENST00000609143 DDRGK1Q96HY6 314 aa14.33□□□□□ -0.12
LINC01278-204ENST00000609143 LNPKQ9C0E8 428 aa14.33□□□□□ -0.12
LINC01278-204ENST00000609143 ZBTB47Q9UFB7 747 aaPredicted RBP14.33□□□□□ -0.12
LINC01278-204ENST00000609143 SCN11AQ9UI33 1791 aa14.33□□□□□ -0.12
LINC01278-204ENST00000609143 N4BP2Q86UW6 1770 aaPredicted RBP14.33□□□□□ -0.12
LINC01278-204ENST00000609143 PKD1L3Q7Z443 1732 aa14.32□□□□□ -0.12
LINC01278-204ENST00000609143 WDR17Q8IZU2 1322 aa14.32□□□□□ -0.12
LINC01278-204ENST00000609143 CEP85Q6P2H3 762 aa14.32□□□□□ -0.12
LINC01278-204ENST00000609143 KDM6AO15550 1401 aaPredicted RBP14.31□□□□□ -0.12
LINC01278-204ENST00000609143 GNAI3P08754 354 aa14.31□□□□□ -0.12
LINC01278-204ENST00000609143 DCTPP1Q9H773 170 aa14.31□□□□□ -0.12
LINC01278-204ENST00000609143 HSP90AB1P08238 724 aaKnown RBP14.3□□□□□ -0.12
LINC01278-204ENST00000609143 SLC52A2Q9HAB3 445 aa14.3□□□□□ -0.12
LINC01278-204ENST00000609143 CHPF2Q9P2E5 772 aa14.3□□□□□ -0.12
LINC01278-204ENST00000609143 HEG1Q9ULI3 1381 aa14.3□□□□□ -0.12
LINC01278-204ENST00000609143 PARP4Q9UKK3 1724 aaKnown RBP14.3□□□□□ -0.12
LINC01278-204ENST00000609143 HMMRO75330 724 aa14.3□□□□□ -0.12
LINC01278-204ENST00000609143 COL5A2P05997 1499 aaPredicted RBP14.3□□□□□ -0.12
LINC01278-204ENST00000609143 GIGYF1O75420 1035 aaPredicted RBP14.29□□□□□ -0.12
LINC01278-204ENST00000609143 GNAI2P04899 355 aa14.29□□□□□ -0.12
LINC01278-204ENST00000609143 TOM1L2Q6ZVM7 507 aa14.29□□□□□ -0.12
LINC01278-204ENST00000609143 DCAF5Q96JK2 942 aa14.29□□□□□ -0.12
LINC01278-204ENST00000609143 PHAXQ9H814 394 aaKnown RBP14.29□□□□□ -0.12
LINC01278-204ENST00000609143 UPF2Q9HAU5 1272 aaKnown RBP14.29□□□□□ -0.12
LINC01278-204ENST00000609143 DBF4Q9UBU7 674 aaPredicted RBP14.29□□□□□ -0.12
LINC01278-204ENST00000609143 MRC1P22897 1456 aa14.28□□□□□ -0.12
LINC01278-204ENST00000609143 CYP27B1O15528 508 aa14.28□□□□□ -0.12
LINC01278-204ENST00000609143 ZNF790Q6PG37 636 aa14.27□□□□□ -0.12
LINC01278-204ENST00000609143 SEC24BO95487 1268 aa14.26□□□□□ -0.13
LINC01278-204ENST00000609143 NFATC2IPQ8NCF5 419 aa14.26□□□□□ -0.13
LINC01278-204ENST00000609143 SRCIN1Q9C0H9 1055 aa14.26□□□□□ -0.13
LINC01278-204ENST00000609143 BMP2KLQ5H9B9 411 aa14.26□□□□□ -0.13
LINC01278-204ENST00000609143 CARD10Q9BWT7 1032 aa14.26□□□□□ -0.13
LINC01278-204ENST00000609143 PCDH11XQ9BZA7 1347 aa14.25□□□□□ -0.13
LINC01278-204ENST00000609143 PCDH11YQ9BZA8 1340 aa14.25□□□□□ -0.13
LINC01278-204ENST00000609143 DNAAF4Q8WXU2 420 aa14.25□□□□□ -0.13
LINC01278-204ENST00000609143 EVA1CP58658 441 aa14.25□□□□□ -0.13
LINC01278-204ENST00000609143 ZCRB1Q8TBF4 217 aaKnown RBP14.25□□□□□ -0.13
LINC01278-204ENST00000609143 HYPKQ9NX55 129 aa14.25□□□□□ -0.13
LINC01278-204ENST00000609143 UBTFL1P0CB47 393 aaPredicted RBP14.24□□□□□ -0.13
LINC01278-204ENST00000609143 TTC5Q8N0Z6 440 aa14.24□□□□□ -0.13
LINC01278-204ENST00000609143 ROBO1Q9Y6N7 1651 aa14.24□□□□□ -0.13
LINC01278-204ENST00000609143 PI4KAP2A4QPH2 592 aa14.24□□□□□ -0.13
LINC01278-204ENST00000609143 IL2RBP14784 551 aa14.24□□□□□ -0.13
LINC01278-204ENST00000609143 CABP4P57796 275 aa14.24□□□□□ -0.13
LINC01278-204ENST00000609143 SLC39A6Q13433 755 aa14.24□□□□□ -0.13
LINC01278-204ENST00000609143 PI4KAP1Q8N8J0 262 aa14.24□□□□□ -0.13
LINC01278-204ENST00000609143 STRN4Q9NRL3 753 aa14.24□□□□□ -0.13
LINC01278-204ENST00000609143 ANXA1P04083 346 aa14.23□□□□□ -0.13
LINC01278-204ENST00000609143 USP44Q9H0E7 712 aa14.23□□□□□ -0.13
LINC01278-204ENST00000609143 DDX21Q9NR30 783 aaKnown RBP eCLIP14.23□□□□□ -0.13
LINC01278-204ENST00000609143 DAXXQ9UER7 740 aaPredicted RBP14.23□□□□□ -0.13
LINC01278-204ENST00000609143 ADCY9O60503 1353 aa14.23□□□□□ -0.13
LINC01278-204ENST00000609143 AHDC1Q5TGY3 1603 aaPredicted RBP14.23□□□□□ -0.13
LINC01278-204ENST00000609143 PRAMEF22A3QJZ6 481 aa14.22□□□□□ -0.13
LINC01278-204ENST00000609143 C5P01031 1676 aa14.22□□□□□ -0.13
LINC01278-204ENST00000609143 ATP8B2P98198 1209 aa14.22□□□□□ -0.13
LINC01278-204ENST00000609143 BEND3Q5T5X7 828 aa14.22□□□□□ -0.13
LINC01278-204ENST00000609143 LARP1Q6PKG0 1096 aaKnown RBP14.22□□□□□ -0.13
LINC01278-204ENST00000609143 LRRFIP2Q9Y608 721 aaKnown RBP14.22□□□□□ -0.13
LINC01278-204ENST00000609143 DDX58O95786 925 aaKnown RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms